Basic Information

Insect: Hypsopygia costalis
Gene Symbol: hb
Assembly: GCA_937001695.2
Location: CAKZJU020000188.1:1286203-1288115[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.58 59 5.6 0.8 1 23 217 239 217 239 0.95

2 6 0.0009 0.092 14.5 3.3 2 23 247 268 246 268 0.97

3 6 0.00014 0.014 17.0 4.4 1 23 274 296 274 296 0.99

4 6 0.35 36 6.3 9.3 1 23 302 326 302 326 0.93

5 6 0.099 10 8.0 1.2 1 21 557 577 557 579 0.83

6 6 0.043 4.4 9.2 0.1 1 21 585 605 585 609 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.58	59	5.6	0.8	1	23	217	239	217	239	0.95
2	6	0.0009	0.092	14.5	3.3	2	23	247	268	246	268	0.97
3	6	0.00014	0.014	17.0	4.4	1	23	274	296	274	296	0.99
4	6	0.35	36	6.3	9.3	1	23	302	326	302	326	0.93
5	6	0.099	10	8.0	1.2	1	21	557	577	557	579	0.83
6	6	0.043	4.4	9.2	0.1	1	21	585	605	585	609	0.89

Sequence Information

Coding Sequence: ATGATAAGCTGCGCAACCCCTGCGGGTATGCCGCCAGCGCCCCACTCTTCACATCCCCCAGTCTGGGGGCCTCTGTTGCAGCCAAAAACGGAACCTATAGACGATGGAAGTTTTTCGAAGGAGCGAACCAGCGGTTTCTACTCCGAAGGCTTCCACAGTGCATCTCTGTCATCACCGTCCACTAAGGAATCTGACGGGCATTCACCTCAGAGCGTTGGTAGTGGCGGAGATCCGTCTCCGTTCTTCGATAGCATGCCCCtcaaagccaaagccaatctagGAGTGGAAATGAATTCATATCGTGGAAGCATTCCGTACAATATTATTACTCCGCCAGTATATGAGAATCGTATGAACGATGCGCGGGAATCTACACCTGGATATGAGTCATACTCCTTGGCACCACCTGCTCATGTATCTACTCCTATAGCACGAGCTACTTCTTCACCCCCCAAAACGTCTCCCCGTACTCCTTCGTCACCTGAAGGAGGTGCTTATGATCGGTATCATGACTCCGGATTTGACGGTACGCAACAAGGCAAACATGACGGTGATGATGCTCGCGATGGCTCCAGTCCCGATGTCGATTTTGATGACGAGCCAGGCCTGAGAAAACCCGCTGTGAATTCTCATGGAAAAGTTAAAACTTTCAAATGTAAGCAATGTGAATTCGTCGCAGTAACGAAGCTAAGTTTTTGGGAACACAGCAAGGAACATATAAAGCCGGAGAAGATGTTAACATGTCCCAAATGTCCATTTGTAACTGAATATAAACATCACTTGGAATACCACATGAGGAATCACTTAGGCTCAAAGCCCTTCCAATGTAATCAATGCACATATTCTTGCGTAAATAAATCGATGCTCAACTCCCATCTTAAATCTCATTcaaatatatatcaatatagaTGTGCTGATTGTacttattgtactaaatactgTCACTCCTTAAAACTTCATCTTCGAAAATATAATCACAGCCCCGCTATGGTCCTAAATATAGATGGCACTCCAAACCCACTCCCAATCATAGACGTCTACGGCACCCGTCGCGGGCCGAAGCAAAAACCTCTCTCTAAAATCTTCGAACAGCAAGTTGGTATTAACCACGGTAATCACAATCAGCCTCAAGCGTCGCCTCCAACGCATCCACTGTTTCGTGGTCATTTCCCCGTGAATTTACCATATTTACCGCAATTAATACCACATTCGTTTCTATTCCCCCCAAATAGTAATTACGATCACGATAAGAACCATTCTGAAATGGTAGTTGATAAGCAAATTACGCCTCCTCCACCTTCACTATTACACCAAAGACTGTCGTATGAAGAGCGACCATCAGAGACACGTGTCACGACACCGCCTGTGAAATCCCCACCCAGCTTGCCTCACACGCCTATAACGCAAACTGCGTCTCCAGAAGAAAGTAACGACGCTCTAGATCTTACACATACGAAGACAAGTGAGGCAGGAACTCCTCAACCAAACGTAGAGCGGTCTGTCCCAGTAACGCCTCTGAAGAACCGACGAAAAGGTCGCGCTTTCAAATTGCAACCAACGGCGTTGCGCCTTCAACACGAAGACACGAAAATGCGCGATGCAGAAGCTTCCGGATCGGAATCAGAGGAAGAAACGCCGATTACTACATCGAATTTTACATCAAATACGTATACGTGCCAGTATTGTGACATTACATTCGGTGACCTAACAATGCATACCATACATATGGGTTTTCACGGCTACAATGATCCCTTCATGTGTAACAAATGCGGAGAGAGGAGCGCTGATCGAGTAGCCTTCTTCATCCACTTAGGTCGAGCACAACATTCGTAG
Protein Sequence: MISCATPAGMPPAPHSSHPPVWGPLLQPKTEPIDDGSFSKERTSGFYSEGFHSASLSSPSTKESDGHSPQSVGSGGDPSPFFDSMPLKAKANLGVEMNSYRGSIPYNIITPPVYENRMNDARESTPGYESYSLAPPAHVSTPIARATSSPPKTSPRTPSSPEGGAYDRYHDSGFDGTQQGKHDGDDARDGSSPDVDFDDEPGLRKPAVNSHGKVKTFKCKQCEFVAVTKLSFWEHSKEHIKPEKMLTCPKCPFVTEYKHHLEYHMRNHLGSKPFQCNQCTYSCVNKSMLNSHLKSHSNIYQYRCADCTYCTKYCHSLKLHLRKYNHSPAMVLNIDGTPNPLPIIDVYGTRRGPKQKPLSKIFEQQVGINHGNHNQPQASPPTHPLFRGHFPVNLPYLPQLIPHSFLFPPNSNYDHDKNHSEMVVDKQITPPPPSLLHQRLSYEERPSETRVTTPPVKSPPSLPHTPITQTASPEESNDALDLTHTKTSEAGTPQPNVERSVPVTPLKNRRKGRAFKLQPTALRLQHEDTKMRDAEASGSESEEETPITTSNFTSNTYTCQYCDITFGDLTMHTIHMGFHGYNDPFMCNKCGERSADRVAFFIHLGRAQHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -