Basic Information

Insect: Hypsopygia costalis
Gene Symbol: -
Assembly: GCA_937001695.2
Location: CAKZJU020000067.1:26608-51000[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.5e-13 5.1e-10 40.4 0.3 2 43 50 91 49 92 0.97

2 9 4.7e-12 6.8e-09 36.8 0.4 1 43 114 156 114 157 0.98

3 9 6.8 9.8e+03 -2.1 0.0 29 41 162 177 158 178 0.74

4 9 5.8e-12 8.4e-09 36.5 1.3 3 44 210 251 208 251 0.96

5 9 2.9e-10 4.2e-07 31.1 1.0 1 44 285 328 285 328 0.97

6 9 3.5e-10 5e-07 30.9 1.5 1 43 360 402 360 403 0.93

7 9 2.7e-13 3.9e-10 40.8 3.2 1 44 446 489 446 489 0.97

8 9 3.5e-12 5.1e-09 37.2 0.5 1 44 566 609 566 609 0.97

9 9 7.7e-12 1.1e-08 36.2 0.7 1 44 639 682 639 682 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.5e-13	5.1e-10	40.4	0.3	2	43	50	91	49	92	0.97
2	9	4.7e-12	6.8e-09	36.8	0.4	1	43	114	156	114	157	0.98
3	9	6.8	9.8e+03	-2.1	0.0	29	41	162	177	158	178	0.74
4	9	5.8e-12	8.4e-09	36.5	1.3	3	44	210	251	208	251	0.96
5	9	2.9e-10	4.2e-07	31.1	1.0	1	44	285	328	285	328	0.97
6	9	3.5e-10	5e-07	30.9	1.5	1	43	360	402	360	403	0.93
7	9	2.7e-13	3.9e-10	40.8	3.2	1	44	446	489	446	489	0.97
8	9	3.5e-12	5.1e-09	37.2	0.5	1	44	566	609	566	609	0.97
9	9	7.7e-12	1.1e-08	36.2	0.7	1	44	639	682	639	682	0.98

Sequence Information

Coding Sequence: ATGGAGTCGATCGGTGACAATGATAAATCGGATGATACAAAAGTATCCGAGGATGATGATAAGGAGGACAGTGATGATGAATTCATGCCATTTCAAGAAAAGGATGATGCAGAGGACAATCATGACAAACGGAAGCTCCTCCGAAGTGGTGTATGGCAGTTCTTTGACATCACTGACATGGAGAATAAAACTGCAACATGCAATTTGTGCTCCGAGCCATTTTCATTTAGGACCACATCGTCCAACCTCTCCAAACATTTGAAAAGGAAACATTATATTGAGTTTGAGAAAATTGAGAATGATGTGAATGACGAGCCTGCCAAATACAGACCAAGAGTAAGCGAAGCATGGGAATATTTCGCAATAAAAGACAGTGTACAGCGACTAGCGACTTGCAAGTTATGTGGTGCCTGCTTCTCTTACAAAACTTCAGTGTCGAATCTTATGAAGCACGTCCAAAGGATGCATGGGGTACTAAAAAATTCAGATGATGAGGAAAATTCTACCCATCTCGTGAAACACATCCAAAAGAATGAGCTACATAGTACTGATGAAGACGACGACGATGGCCTTGAAGAAATCCCGTTTGACACCGACATTGACAAGCCGAGAGCTAACCTGAGCTTATCGTGGAAGTATTTCACAAAAACCGATCCGTTGCTTCGCATAGCAACTTGTAAGTTGTGCAATGAAAAGCTGTCTTACCAATCCACGGTGTTTAACCTCATGAAGCACGTCCGGAGAAAACATAAGGACTACATTGATCTCAGCATGGATAGGGATCACATAGATGACGAAAACGAAGAGGAGACAGAGGAAAATAATGGCGTTAAGAAGGGGAGGTCCAACTCGAGTCGAGCGTGgaaatatttcacaaaaaacGACCCAGAAAATTGGATGGCAACTTGCAAGTTGTGCAACCAGGAGCGCTCTTACGCCACGACGGTCGGAAACCTCTTAAAACACATCCGTGTCAACCATAATATTACCCGTTCCGACGATTCTTGGGAAACCGATGACGAGAATGTGGAAGACTCAGAATTTAATGAAACTAATGATACGACGAAGGTTAACACGAGCCAAGCGTGGAAGTATTTCGTAAAGTCTGACCCGGAGCATCGCATAGCAACTTGCAAGTTATGCAACAAGGAGTTGTCCTATCTATCCACACTTGGAAACTTAATGAGCCACATCCATATATACCACAAAGCCAATAACACCACCACTAAGGACACGAGATACATGGACATTAAAAACAAGAAGGTTGAGATAGAGGATAACAATAGGACTGAGCTAAATGAAAATAATGGCAATAAGTTGCCGGGAATGAAACCGAGCCAAGCTTGGAGTTATTTCACAAAGACTGATCTGAGACGACGACTAGCAGCTTGTAATTTCTGCAACAAGGAGTTGTCTTATCTAACCTCACATTCAAATTTAATGAAGCACATCCGTTCATCCCACAAAGACATTGACACTACCATATCTACCACGGGCCACGCGGATATCAGAAACGAGGAGTTTCAGCTTGAGGATGATAGGACTGATGTAGAAGATAATAACATTGAGTCAGAGACGAAAAGCATTGAGCCGGAAGATAATAACATTGAGTCAGAAGAGAATAACATTGAGCTGGATGATAGTGACACTGAACTAGAAGTTAAGATTCCCCGTAAGAAGGAAAGAATCAGTACGAGTGCAGCGTGGCAGTACTTCACAAAGACTGACCCGGAACGTCGCATTGCAACTTGTAATTTGTGCAACAAAGAGCGATCCTACGCCTCGACGGTCGGGAATCTGTTAAAGCACATCCGCCGAACTCACAATATTAATCCTTCGGTTAAATCAAAGGATACAGACGATGAAAATGTGGAAGAGTTAGAGTTTACCGCAAGACGTCCGACTAATGGCCGATCACCAATCTGGATGTATTTCAAGGTGATTAACAAATTGAAGAAAAAAGCCATTTGTCTAGTGTGCAAGAAGCGGCTATCGTTCGAATCCTCGgtcacaaatttaaaaaagcACTTGATCAACCAACACCCGCAGATAAAACTATCGGAAGCTAGTGAGGGCAAGAGAATTATCATATCAACGGACGGACAAGTATATGAAATTGAGGAGGCCTCTGACTTCACCAAACAGGAAAAGACTGATGATGAGCAGcCCACCGCTTTAGACATAGACACAGTATTCCTAGACGATTTCGACGGTGACATATCAATAGAAAATGAAAAACCAAAATCTAAACCACAAAAAAGGCCGCATATACCAAAGAGAAAAGAACGCCCTGCGTGGCGACAACAAATACCACACGAAGACTCACAAAGCAGTTCCGACAGCGAAATAACATTCAAAAAGCGATACGTACGGAAAAAAACCGACACTTTAGACAAATTCGGCACATACCTCATTTCTTTATTGCGCCAATTGCCGAACGAATTGTCGAATCAGTTACAAATGGACTTTGTGAAGCAAGTCATGACAGCTCATTTGACGTATGAGGCGCAGAAAAAAATACCGGTTTCTGTGCCGACTACCGGTTATGCGATAACCATAAGCGAACCGCAGGCGCAGGCGGCTGATATTCAGTACATGACTGTACAGGAGCATGTTGAAATTAATGGAGAATAA
Protein Sequence: MESIGDNDKSDDTKVSEDDDKEDSDDEFMPFQEKDDAEDNHDKRKLLRSGVWQFFDITDMENKTATCNLCSEPFSFRTTSSNLSKHLKRKHYIEFEKIENDVNDEPAKYRPRVSEAWEYFAIKDSVQRLATCKLCGACFSYKTSVSNLMKHVQRMHGVLKNSDDEENSTHLVKHIQKNELHSTDEDDDDGLEEIPFDTDIDKPRANLSLSWKYFTKTDPLLRIATCKLCNEKLSYQSTVFNLMKHVRRKHKDYIDLSMDRDHIDDENEEETEENNGVKKGRSNSSRAWKYFTKNDPENWMATCKLCNQERSYATTVGNLLKHIRVNHNITRSDDSWETDDENVEDSEFNETNDTTKVNTSQAWKYFVKSDPEHRIATCKLCNKELSYLSTLGNLMSHIHIYHKANNTTTKDTRYMDIKNKKVEIEDNNRTELNENNGNKLPGMKPSQAWSYFTKTDLRRRLAACNFCNKELSYLTSHSNLMKHIRSSHKDIDTTISTTGHADIRNEEFQLEDDRTDVEDNNIESETKSIEPEDNNIESEENNIELDDSDTELEVKIPRKKERISTSAAWQYFTKTDPERRIATCNLCNKERSYASTVGNLLKHIRRTHNINPSVKSKDTDDENVEELEFTARRPTNGRSPIWMYFKVINKLKKKAICLVCKKRLSFESSVTNLKKHLINQHPQIKLSEASEGKRIIISTDGQVYEIEEASDFTKQEKTDDEQPTALDIDTVFLDDFDGDISIENEKPKSKPQKRPHIPKRKERPAWRQQIPHEDSQSSSDSEITFKKRYVRKKTDTLDKFGTYLISLLRQLPNELSNQLQMDFVKQVMTAHLTYEAQKKIPVSVPTTGYAITISEPQAQAADIQYMTVQEHVEINGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -