Basic Information

Transcription Factor Domain

TF Family: CSRNP_N
Domain: CSRNP_N domain
PFAM: PF16019
TF Group: Unclassified Structure
Description: This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0012 26 5.9 0.2 24 46 29 51 9 58 0.88

2 9 0.0017 36 5.4 0.2 24 46 58 80 54 87 0.91

3 9 0.0018 38 5.3 0.2 24 46 87 109 82 115 0.91

4 9 0.0016 35 5.5 0.2 24 46 116 138 110 145 0.91

5 9 0.0018 38 5.3 0.2 24 46 145 167 142 174 0.91

6 9 0.0016 36 5.4 0.2 24 46 174 196 169 203 0.91

7 9 0.0018 40 5.3 0.2 24 46 203 225 200 231 0.91

8 9 0.0015 32 5.6 0.1 24 46 232 254 228 265 0.90

9 9 0.31 6.8e+03 -2.0 0.0 24 37 261 274 257 282 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0012	26	5.9	0.2	24	46	29	51	9	58	0.88
2	9	0.0017	36	5.4	0.2	24	46	58	80	54	87	0.91
3	9	0.0018	38	5.3	0.2	24	46	87	109	82	115	0.91
4	9	0.0016	35	5.5	0.2	24	46	116	138	110	145	0.91
5	9	0.0018	38	5.3	0.2	24	46	145	167	142	174	0.91
6	9	0.0016	36	5.4	0.2	24	46	174	196	169	203	0.91
7	9	0.0018	40	5.3	0.2	24	46	203	225	200	231	0.91
8	9	0.0015	32	5.6	0.1	24	46	232	254	228	265	0.90
9	9	0.31	6.8e+03	-2.0	0.0	24	37	261	274	257	282	0.81

Coding Sequence: ATGCTCGGTGACGATAAAGTAgttaagaaccaccAGGTTGGCCACCAGCACAGTAGAGTGTACTCACCGGCTCCTCTACATGGAGAGGTACCCGCGCGCGGCGGAGCGGCGGCGGGCCACCAGGTAGGCCACCAGCACAGTAGAGTGTACTCACCGGCTCCTCTACATGGAGAGGTACCCGCGCGCGGCGGAGCGGCGGCGGGCCACCAGGTAGGCCACCAGCACAGTAGAGTGTACTCACCGGCTCCTCTACATGGAGAGGTACCCGCGCGCGGCGGAGCGGCGGCGGGCCACCAGGTAGGCCACCAGCACAGTAGAGTGTACTCACCGGCTCCTTTACATGGAGAGGTACCCGCGCGCGGCGGAGCGGCGGCGGGCCACCAGGTAGGCCACCAGCACAGTAGAGTGTACTCACCGGCTCCTTTACATGGAGAGGTACCCGCGCGCGGCGGAGCGGCGGCGGGCCACCAGGTAGGCCACCAGCACAGTAGAGTGTACTCACCGGCTCCTTTACATGGAGAGGTACCCGCGCGCGGCGGAGCGGCGGCGGGCCACCAGGTAGGCCACCAGCACAGTAGAGTGTACTCACCGGCTCCTTTACATGGAGAGGTACCCGCGCGCGGCGGAGCGGCGGCGGGCCACCAGGTAGGCCACCAGCACAGTAGAGTGTACTCACCGGCTCCTTTACATGGAGAGGTACCCGCGCGCGGCGGAGCGGCGGCGGGCCACCAGGTAGGCCACCAGCACAGTAGAGTGTACTCACCGGCTCCTCTACATGGAGAGGTACCCGCGCGCGGCGGAGCGGCGGCGGGCCACCAGAGGTACCCGCGCGCGGCGGAGCGGCGGCGGGCCACCAGGTAG
Protein Sequence: MLGDDKVVKNHQVGHQHSRVYSPAPLHGEVPARGGAAAGHQVGHQHSRVYSPAPLHGEVPARGGAAAGHQVGHQHSRVYSPAPLHGEVPARGGAAAGHQVGHQHSRVYSPAPLHGEVPARGGAAAGHQVGHQHSRVYSPAPLHGEVPARGGAAAGHQVGHQHSRVYSPAPLHGEVPARGGAAAGHQVGHQHSRVYSPAPLHGEVPARGGAAAGHQVGHQHSRVYSPAPLHGEVPARGGAAAGHQVGHQHSRVYSPAPLHGEVPARGGAAAGHQRYPRAAERRRATR

Sequence clustering based on sequence similarity using MMseqs2