Hcos032307.1
Basic Information
- Insect
- Hypsopygia costalis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_937001695.2
- Location
- CAKZJU020000737.1:583518-637816[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-15 7.1e-12 46.1 0.0 1 41 270 311 270 314 0.93 2 2 2.5e-18 2.2e-15 57.3 0.0 1 43 475 518 475 520 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGAAGAAAATGGAAATTATATCAGGACGCATTAATACCAAAGCGGCCCGAACGAGAGCTCAGCGACGAAGACTCCATGCCGGCCACCGACCCCCCGCCCGCGCTCAAGATAAAAACAATAGAGCAGATCAACGCCCCAGAAGACGAGAGGCCGAAAGCCGAAGAACAGGAGCCAGAAGCCGAGAAACGACGTCCAGAGACGATACTAGAAAGTCTTATCAAACGGCCGGCTACGCAGCCGAAAGTGGAGTTGTCCGAAGAACCGACGGATTGGAAGCCACCAGACAAATGTTATTTTTGCGTGGACGGGGAGAGGGGTGAGGAGGGGCGGCAGGCGGGCGGCGCGAATAGTCCAGCATCAGAGTCAGACAGCAGTTCGGTGTCAGGAGCGAAGAGTCCAGCGGGCGCGCCGCCTATGCTGCTGCAGAACTTGCTGCAGCTGCAGCTCCAAGCACAGAACCCACAGGTTATCACGCAGGGCTACAGTGAGTTGTGTCTGCAGTTCCAGCAAATGATCGCCGCGCTCGCGACGCTGAGCCCAGGGCTGCCGCAAGCGTTCTCCCAGGTGATGCTGATGCATAGGCTCGCGCAGAACCGACAACAAGTTGACAGGCTACCAGATGTGTGCGACAAGGCACCAGCACCGTCGTCACCGACGTTGACTGAGCAGCCCTTGGATCTCAGCGCCAAATCCACCTCCAGTACCAGTGGCACTCCACCTCCTGACTCTAAGATTTTGGATAATAGGTTGAAGCGCGCAGTACTAGAAAGTGCCAGCAATAGTACAAGCCGGCGAGCATACACCGAAGATGAACTGCAATTGGCGCTGCGTGATATACAGTCCGGACGTCTCGGAACCCGACGCGCCGCCGCCGTCTACGGCATACCGCGCTCCACGCTTCGTAACAAGGTTAACAAATTCGGACCCGGACTCGACCACCACGACTCAGAGCCCGATAGCGAGCCTGAAAGATCCGACTCTCCACCCTCCGTCATACTCAAGATCCCAACATTCCCCCCGCCCGATGAGAACAGCCCATCTCCCGCGACCCCCATCACGACACCCGTCACACCCATCACACCTATGCTCCAACCTCCACAACCACCCGTCAATCCACCGTCGCATCTTCCAGCTTTCTTCGCTGACCCACCCAACCAGCATCTCTTCACGTCGATAAATGACGTTATAGTTAGAAGTATCAGTCAGAAGTTCCAGCAGCATCCCGATAGACCTCAGGCAAATGATCTTCCGTACATGAGACCACCAGATAGACACGTATCTGTCATTAAAACTCCTCCGGACAACCAAAGGAACTACCCGACGCCGGGTAACTCCCGGGCTTCGACGAACAACAACGGTCAACCGGCTACCGGCGGTAAAGGTACGCGTCCTAAGAGAGGGAAGTATAGGAACTACGATAGAGACAGCCTAGTCGAAGCCGTAAAAGCGGTGCAACGAGGCGAGATGTCCGTGCACAGAGCCGGTTCTTACTATGGCGTGCCACACTCCACTTTGGAGTACAAGGTGAAGGAGCGGCACTTAATGCGGCCACGGAAACGCGAACCGAAGCCGCAACCGGATACGAAGCCTCAACCGCCGAAGCCGCAGCCACCGAAACCACCGACGAAGCCCTTCTCCAACGGCCTAAACGGACCGGAGACCGGTTATCCGCCGGGCTACCCATTCTGGGCGAACACCAGCTTCCCACCGCCTACCCCAGATTTATACGCTTCGCATATGATGCGGAGGTTGCGCGAGGAAGCGCCTCCGCCGGCGAACGGGTCGTTTCTGGAGGGTATAATCCGGTCGAGCCTGGAGCGGCCGGCGCGGGCGGCGCTGCTGCAGCAGCTGACGGCGGAGCCGCGGCCGCCGCTGCCGCCGGCGGAGGCGCCGAGCCTGCTGCGGCGGCTGGCGGGCTCGCCGGCCGAggacgcgccgccgccgcgccgcgcgcgccTCGACTGCGCCGAGCTGGCGGCCGACATCCGCGAGACGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCCACGCCGCCCGCCGGCGCCGcgtcgccgccgccgccgccgcccgccgcgccgcccgacCGCGCCTAG
- Protein Sequence
- MGRRKWKLYQDALIPKRPERELSDEDSMPATDPPPALKIKTIEQINAPEDERPKAEEQEPEAEKRRPETILESLIKRPATQPKVELSEEPTDWKPPDKCYFCVDGERGEEGRQAGGANSPASESDSSSVSGAKSPAGAPPMLLQNLLQLQLQAQNPQVITQGYSELCLQFQQMIAALATLSPGLPQAFSQVMLMHRLAQNRQQVDRLPDVCDKAPAPSSPTLTEQPLDLSAKSTSSTSGTPPPDSKILDNRLKRAVLESASNSTSRRAYTEDELQLALRDIQSGRLGTRRAAAVYGIPRSTLRNKVNKFGPGLDHHDSEPDSEPERSDSPPSVILKIPTFPPPDENSPSPATPITTPVTPITPMLQPPQPPVNPPSHLPAFFADPPNQHLFTSINDVIVRSISQKFQQHPDRPQANDLPYMRPPDRHVSVIKTPPDNQRNYPTPGNSRASTNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDTKPQPPKPQPPKPPTKPFSNGLNGPETGYPPGYPFWANTSFPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPARAALLQQLTAEPRPPLPPAEAPSLLRRLAGSPAEDAPPPRRARLDCAELAADIRETVQRLRADKLRPRNGTPTPPAGAASPPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -