Hcos022001.2
Basic Information
- Insect
- Hypsopygia costalis
- Gene Symbol
- kn
- Assembly
- GCA_937001695.2
- Location
- CAKZJU020000423.1:448740-466610[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-42 1.5e-38 133.8 0.0 11 116 130 225 121 225 0.92
Sequence Information
- Coding Sequence
- ATGAGTGGAAGTGGCGCCATCTATTCTAGTGTCGCCGTCCCGCTCTTGAGGCGAGGGCGTGTCCCTAGGGCGCCTCCCACAGTCCGCGGGGACGGACGGGGGCTCCGCGAAGCCCGGGCACTCGGCGGCGCGCTCCCGCGACGCTTGTTAGTGTTCCGCAAATTCACAACGGGATCGCCCTGCGTCGCGATTCGGTCGGACGAGCTAAACGCCGCGGCGGGCGGGTACACCGGCTCGCCGTGGCCGCCGCTAGAGCTAGACCCCGTGGGATGGGGTCGCAAGCTGTACCCATCTGGGGCGCCGAGGTCTTCAGGTGGGCTGATGTTCGGCCTCCACCACCAAGAGGCTGCGGGAGGACTCCATGCCCAACCTCGGGGGCCGGTCACCTCGCTGAAAGAGGAACCACTAACCCGCGCTTGGATGACACCCACTTCCTTAGTTGACAATAccaaCAGCGTGGGTGTCGGCCGCGCGCATTTTGAGAAGCAGCCGCCGAGCAACCTACGCAAGAGCAATTTCTTTCATTTCGTGGTTGCACTGTACGACCGTGCAGGGCAACCGGTTGAAATAGAGAGGACCGCCTTCATCGGGTTCATTGAGAAGGACCAGGAGGCTGAAGGTCAAAAGACAAACAACGGCATCCAATATAGGCTTCAGCTACTTTATGCTAATGGTTAG
- Protein Sequence
- MSGSGAIYSSVAVPLLRRGRVPRAPPTVRGDGRGLREARALGGALPRRLLVFRKFTTGSPCVAIRSDELNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00796312;
- 90% Identity
- iTF_00236437; iTF_00171545;
- 80% Identity
- -