Hcos036583.1
Basic Information
- Insect
- Hypsopygia costalis
- Gene Symbol
- jarid2b
- Assembly
- GCA_937001695.2
- Location
- CAKZJU020001046.1:141356-146664[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-17 1.4e-13 52.2 0.0 6 89 835 913 831 913 0.93
Sequence Information
- Coding Sequence
- atgCGTCCGGGCAGGATAATTGATAGTTCTCTTAAAAGCACCGGAGTCGtTACGAAActgaatattaaattaaaatcaacaTCTCAAAAGAGTTCCATAAGTCATAAAGACAAGAACCATAAAGATAATGAGCACTGGAGCAAAGCAGTGAAACGAAACTCAGCTCTTTCAAAAATCCTGGGTAAATTGCCTGAAACGCCGAACACAGACGATAATAAAATGTTGATAGACTTTCCTAAAACACTGGTAGATGTTCATAAAACGCCGATAGACGTTTCTAAAACTCCGATAAACGTATCAAAAACAGCGATAAACGTTTCTAAAACACCGATAAACGTTTCTAAAACAGCGGTAAACGTTTCTAAATCAccgataaacatttctaaaTCAGCGATAAACGTTTCTAATTCAGCGATAAACGTTTCTAAATCACCGATAAACGTTTCTACAACAGCGGTAAACGTTTCTAAATCACCGATAAACGTTTCTCAAACGCCGATAGACGTTCCTGAAACACCGATAAAAGTTCCTAAAACGTCAACAGACATTTCTAAAACGCCAACTGACATTTCTGAAACGCCAACTGACAGTGCTGGAACGTCTCCAGACGTTATTATACAGGCTGCATACGATCCTGCAACTCTGACCCTTCTTCCTGAAACACAGAGTGGTGACCACTCAGCAAACTCTGATACGCAGTGTCCCTCCTTAAAATTCGCCACTGCTAAAGAAGTGATGGACGCACCGCCATGTGACTTGAAAGATTTATGTCACAATTGCAGTCATTGCAGTCGAGTTGATAAGGTAGTTGAGATAGCCAGACTTGTCGAGCCGCCTGTCGATATTGACTCAGACTCTATGGACATGAGGCTTTATATGTCCGACGACGAAGAACCACCTACTGATGAAATACGAAAGAATGTTGGAGAAAGCACGAACCGTGACGTCAATGCTGAAGTGCcccctgatgatgatgcaagTTACTTGTATCTAGATATTTTACCACCGACAGTGGGCAGTGTCATTCAAATAAAGTCTTCAAAAATTCCTAACCAAGATAAGCAGATGACAATAGCTCGGCTCATGCCCAAGTCTGTAACTAACGGTAAAAATGAGTTTAATCTCGTCGAACACGAAAATCTATTGGATCAGTTGCTTGGAACATTAAATATGCATAGATCGAGCGGTGATAGTTACCCGTCTATAGTAAATCATTGGGTACAaaacaatactaaaaaaaatccaatgttCACGGCGATCGAAAATTTTATTGACTTATCTGACAACCAGGACGACGATATCAAGTTTAATATTGAAACCGATATCCAAAAAGGAATTACATTACAGGATGAGTTTTCATTTATCGGCCAAGAGAACTCATCTGAGTTACCAATTATCACTAACATTACATCAGAATCAGAAGATTATTGCATACCATCTACGAGTACAGCTTCTGAATGCGTTAAGTCCGAAGCTTTCGCAGCCCAAGAGACAAGAGAGACTGACAACCAATTGGCTAAAAATGTAGAAATACCAACAGGAGCAAAGGAGTCTTGTATACCATCGACAAGTAGAACATGTAGACGTGGCAAATCCGCAGTTTCCACAACCATGGAAACGAGGCAATCTAGCGGCCAGCATGCTGAAATCAGACAGACGTTTTCACAATCAAAAGATTGTATACCATCTACGAGTAGAGGTTATAGACGCCTAAAGACCGCAGTTCCCTCTGATCTGGAGAGGAATACGTCTGACGCTCAGCCGGCAGAAATTACACCAATGCCAATAGAAGTAACAGATCGTTGCATACCATCTACAAGTAAAGTGGAAAAAACTACTAAGTTCGCAATTTCGACTGCACTGGAGACGAGACGAACTGACGGCCAGTCTCCTGAACTTGCAGAAATGTTAACAGAAGCAAATGATTATTGTATGCCATCTACGAGTAAAGCGGACAAACGTGGCAAGTCCGCAGATTTGGGAATAAGCAAGGTTGATGGCCAGTCTGCTAAAATTGCACAGACGCCAATAGATACAAAAGATTGGAGTATACCATCTACAAGTAAAACTGATAAACGCGTCAAGTCAGCAATTCCTACCTTAGAGACGAGAAAGACTGACGCCCAGAGGGCTGAAATTGCGCACACACCACCACTAGCAAGGGATTACTGTCTACCATCTACGAGTAAAGCGGATAGAATTACGAAGTCTGCAATTCCCACGGCCCATGAcgccaacaaaaacaaaacggGTTTTCCTAAAGTCTTAGATAGGGCCAAACTAGTAGACGCCCCCGTTTACAAACCAACAGAGGCCGAATTTAAcGATCCTGTGGCCTATTTCGAGAAAATAATGCCGACTGCTTGTAAGTACGGCATATGCAAGGTGGTTGCGCCGGCTTCATTCAAGCCTAAATGCATAATGAATGACAAAATACGATTTAACGTGTCGAACCAGTACATTGCGCGTCTGTACAGCCGTTGGGGTTTGGCTGCCAAGGAGATGGCCGCCATCAAGGCATACCTTGCTACACAGTCTGTATACTTCACGAGGGCTCCATTTTTGGACGGATTGGAGGTAGACCTGCCAAGGTTGTACCGTACGGTGCAGAAATACGGCGGGCTTAACTGTGTCATTGAAAAGAAACGGTGGGGTCGCGTTGCCGAAGAGATGAATATCGACAGAGGGCATGGGGCCAAGCTGGACATGATCTACATGAAATTTCTCGTGCCGTATGATACGCTCTCAAATCGTGAGTGCAAATtgatattgtttaaataa
- Protein Sequence
- MRPGRIIDSSLKSTGVVTKLNIKLKSTSQKSSISHKDKNHKDNEHWSKAVKRNSALSKILGKLPETPNTDDNKMLIDFPKTLVDVHKTPIDVSKTPINVSKTAINVSKTPINVSKTAVNVSKSPINISKSAINVSNSAINVSKSPINVSTTAVNVSKSPINVSQTPIDVPETPIKVPKTSTDISKTPTDISETPTDSAGTSPDVIIQAAYDPATLTLLPETQSGDHSANSDTQCPSLKFATAKEVMDAPPCDLKDLCHNCSHCSRVDKVVEIARLVEPPVDIDSDSMDMRLYMSDDEEPPTDEIRKNVGESTNRDVNAEVPPDDDASYLYLDILPPTVGSVIQIKSSKIPNQDKQMTIARLMPKSVTNGKNEFNLVEHENLLDQLLGTLNMHRSSGDSYPSIVNHWVQNNTKKNPMFTAIENFIDLSDNQDDDIKFNIETDIQKGITLQDEFSFIGQENSSELPIITNITSESEDYCIPSTSTASECVKSEAFAAQETRETDNQLAKNVEIPTGAKESCIPSTSRTCRRGKSAVSTTMETRQSSGQHAEIRQTFSQSKDCIPSTSRGYRRLKTAVPSDLERNTSDAQPAEITPMPIEVTDRCIPSTSKVEKTTKFAISTALETRRTDGQSPELAEMLTEANDYCMPSTSKADKRGKSADLGISKVDGQSAKIAQTPIDTKDWSIPSTSKTDKRVKSAIPTLETRKTDAQRAEIAHTPPLARDYCLPSTSKADRITKSAIPTAHDANKNKTGFPKVLDRAKLVDAPVYKPTEAEFNDPVAYFEKIMPTACKYGICKVVAPASFKPKCIMNDKIRFNVSNQYIARLYSRWGLAAKEMAAIKAYLATQSVYFTRAPFLDGLEVDLPRLYRTVQKYGGLNCVIEKKRWGRVAEEMNIDRGHGAKLDMIYMKFLVPYDTLSNRECKLILFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -