Basic Information

Gene Symbol
ZFAT
Assembly
GCA_035045125.1
Location
JAWNNJ010002136.1:4421-24646[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 7.8 5.6e+02 1.4 0.7 3 21 520 538 519 542 0.90
2 14 0.094 6.6 7.4 0.2 2 23 564 586 563 586 0.93
3 14 0.0043 0.31 11.6 0.5 1 23 603 626 603 626 0.97
4 14 1.4 99 3.7 0.3 1 22 631 652 631 655 0.90
5 14 0.023 1.7 9.3 0.1 1 23 707 730 707 730 0.96
6 14 0.14 10 6.8 1.0 1 21 735 755 735 756 0.92
7 14 7.5 5.3e+02 1.4 2.0 1 20 778 797 778 800 0.87
8 14 5.4e-05 0.0038 17.6 2.5 2 23 813 833 812 833 0.97
9 14 5e-06 0.00036 20.9 1.7 1 23 839 862 839 862 0.96
10 14 0.00043 0.03 14.8 0.6 1 23 881 903 881 903 0.98
11 14 7.8 5.6e+02 1.4 0.0 1 23 910 934 910 934 0.82
12 14 0.081 5.7 7.6 5.0 1 23 939 963 939 963 0.97
13 14 0.033 2.4 8.8 2.9 1 23 974 996 974 996 0.98
14 14 0.0028 0.2 12.2 4.4 1 20 1002 1021 1002 1023 0.95

Sequence Information

Coding Sequence
ATGCATTCGGAGTCGGATGAGCTAGAGGACACTCATCTGTGCATCAAGTGCAATGCGACGATTGTGGGTCTGACCAAATACATCGACCATCGCAAGACCAACTGCCTCAACCTCGGCAGAACCCAGGAGCATGAGAAGCAGGTGATTACACCGACCACCAGAGCCTCCACTTCCAGTAGTAATCTGGATCACAGCTACGATGGTTTTCACTTCACCGAACCGGAGGCGCCGAGCAGTTATCTGCGCAAGACAACAGCAAGTCATGGAGGCAAGACATCCAAATCTCTGACGGATGCCTACGAATTGACCTATGAGCTGGGAGCGGATGTTTTCTTCTCCTCCCTGCAGCTGCAGAGCGTGTCGACGGGGGGCAAGACGAGCGCAAGGACGGAGCGGGTGAAGGAGGATCCTCATGGCTGGCATGGAAGCAGCAGTTGCTCCGAATCCCTGCTGAAAGCGGTGCGGGAGCAGGAGGAGTCGGATTTCAAGCCGCTGAAGTTTGTGCACTCGCCGGAGGAGGCAAGtgatgaggaggaggaggacgaggatGACTTCGAGGCGGATGAGGACGAaccggagcaggagcaggaggacgACGATTATTGTCCACCCTCTACGCATACCGGAGGCAAGTGGAAGCCCCGACACTCTCCGCCAGCGGTGCCTGCCTGCCATACCGGAGGCAAGTGGAAGCCAGAGCACCGTCATTCGCCTCCAGCCGTACCCGCCGGCCATACCGGTGGCAAATGGAAACCTGAGCACCGTCATTCCCCTCCAGAGGTGCCTGCCTGCCATACCGGAGGCAAGTGGAAACCGGAGCACCGTCATTCGCCTCCATCCGTACCCGCCTGCCATACCGGAGGCAAGTGGAAACCGGAGCACCGTCCGCAGCTTCGCCATACGCACCTCGCACGCATCTCTCCCAGCTGGGACGAGGCTCCGGAGGACCATCCTCCTGCGGAGCACACTCACGGCAAGTGGGTGCCCGGCAGCAAGCAGCTGGAGTACCGACAAAACATTGACCTCACCAAGTTGCAGCAACCCAATGCCAGTTATTGGTGCAACATCTGCTGTCGTCGCCTCAAGACCCGCCTCAACTACGACCAGCACCTACGTAGCGCCTACCATCAGCGACGTGCCGAGCCGGAGCTTCAACTGGAGCAGGCGAATCTTATACGCGTCAATCTCACAATCAGCAAGGGTTTCACGGAGAGCGGGACCTCGACCCTACAGCCCCTACAGAGCGACACCTTGCCTCCTCGTCGGCCCCGTCGCGCCAATCTCTATCGCTGCAAACTCTGCCGACACAGCGTTCCTCTCCACCTGATCGGCAAGCATCTGATCTCCCATTATCACTATCGAAGGTTGCAGCAGACGCCGCTGCGTCGGGAGACCTCGTTGATGACCATTCTGGAGTACATGGAGAGCATCGTGAGGCAGGCGCCCTTCCAGTGTCTGCCATGTCGTTTCTACGCCAACACGGAACAGGCATTCCAGAATCATTGGCGTTCGGATGCGCATGTGAGGCACACGGAGCAGCTAGGAGGCAACTTCTGGTGCAGTTATTGCCAGTTCGAGTGTGGCAGCAATCTGGAtatgtggcgccatctgttggACGCCACGCACAAGGAGGTGCTCTTCGCCCTGAACCGCTCCGTGCCCGTCTGCATCGCACAGCGTCGTGTGCTTAGTTGCGACCTCTGCAGTCAGAGCTTTCTCTACAATGTACAGCTGCGTCAACACTACGCTGTGGAGCATATGGAGCAGCTACCTCTCGGTACGGCCTCGGATGGTTATCAGTGTCGCTTTCGCTGCGGCATCTGCGGCATGACGCAAAGGTCGCGGGTGGCGCTGCAGCGGCATGAGAAGCGCCAGCATCGCCTCAACCGATATTATTGTGCGCTCTGCCAGCTGGACTTTGGGACGGCGCTTCAGGCAAGAAGACATCGCAATCTGATGCAGCACAAGCGACATGCAAAtcggaagaagaagaagataaaGGATAAAGCCCCATCCCAGCCGGAGTCGGAGcttcagcagctgttgctaaCGGTGCTGGAGGAGACAGGGAACAAATCGGATGTAGAGCCCGAACCGCAACCCGATACTCCTGCTCTACATCAATGCGCCAGCTGCCCGCTTAGCTTTGAGGCGCCTCAGGCTTTGATACAACATCGACGTGAGCTGCATCCGATGGAAAATCATGCCTGCCTCTCATGCGGTTGCAGCTTTCAATCCGCCCAGGCGCTGGGACGTCATACACGCAGTTGTCAGCCAATAGCCTCCGGTTCCAATTCCAACTCCAACGCCAATACCTCCTCTTCCCAAACCTATCACTGTAATCAGTGCAACTTCACAGCCAACTACGAAGCGGATCTGCTTTATCACGGCTTCTTTCACGACCGTTCCAACTccatcaacaacaacgagcTGCTCCAGTGTCCGCTCTGTCCCAAGAAGTTCCGCAAACATTCGCTACGCGCCCATCTGCGCAATCACACCAACGAACGCATCTTCGCCTGCTCCGAATGCGACGCGAAGTTCGCCAGAAGACACAATCTCAAGAATCACATGGCCACCAAGCATGCCCAGCAGgagaaacagcaacaggcgCCCAAGAAGTCCAAGGAGACCAAGAAGTTTCAGTGCGGCACCTGCGGCAAAATTCTGGCCAAAAAATACTCCTTGAAACTGCATGAGCAGAGCCATCTCGAGGTCGTCCGTCGCTTTCCCTGTCGTTTTGAGGGCTGTCCCTATGCGGGTCTCACGGCGGATGCCCTCAGGACCCATCTGGCATCGCATGCCCAGGGCAGCCATAAATGCACCCAGGAAAACTGTAGTTACGTCGGAAAAAGTCAGCTCCATTTAAAGCGgCACCTCAAGTCGCATGAGAAGGAAGGAAGCGAGGAGGGAAAATGGTATTCCTGCGATCAATGCGACTTCAGAGCCCGCATCAAGGGGCATCTTAGAAGACACAGCCAGAGGCATACGGGAGAAAAGCCCCATAGGTGTCCCCACTGTGACTTCCAGTGCAGCAGCTTCGACAATCTCAGGAAGCACATCGTCAAGACGGGAAAACATCCCGGAAAGTTCATCTACGAGTGTGCCGCCTGTACAGTGGAGCAATCAGCCGATGTCTTCAGGAGCAACAGCCACAAGGAATACCAATTACACTTGACTACACACAAAACTTAG
Protein Sequence
MHSESDELEDTHLCIKCNATIVGLTKYIDHRKTNCLNLGRTQEHEKQVITPTTRASTSSSNLDHSYDGFHFTEPEAPSSYLRKTTASHGGKTSKSLTDAYELTYELGADVFFSSLQLQSVSTGGKTSARTERVKEDPHGWHGSSSCSESLLKAVREQEESDFKPLKFVHSPEEASDEEEEDEDDFEADEDEPEQEQEDDDYCPPSTHTGGKWKPRHSPPAVPACHTGGKWKPEHRHSPPAVPAGHTGGKWKPEHRHSPPEVPACHTGGKWKPEHRHSPPSVPACHTGGKWKPEHRPQLRHTHLARISPSWDEAPEDHPPAEHTHGKWVPGSKQLEYRQNIDLTKLQQPNASYWCNICCRRLKTRLNYDQHLRSAYHQRRAEPELQLEQANLIRVNLTISKGFTESGTSTLQPLQSDTLPPRRPRRANLYRCKLCRHSVPLHLIGKHLISHYHYRRLQQTPLRRETSLMTILEYMESIVRQAPFQCLPCRFYANTEQAFQNHWRSDAHVRHTEQLGGNFWCSYCQFECGSNLDMWRHLLDATHKEVLFALNRSVPVCIAQRRVLSCDLCSQSFLYNVQLRQHYAVEHMEQLPLGTASDGYQCRFRCGICGMTQRSRVALQRHEKRQHRLNRYYCALCQLDFGTALQARRHRNLMQHKRHANRKKKKIKDKAPSQPESELQQLLLTVLEETGNKSDVEPEPQPDTPALHQCASCPLSFEAPQALIQHRRELHPMENHACLSCGCSFQSAQALGRHTRSCQPIASGSNSNSNANTSSSQTYHCNQCNFTANYEADLLYHGFFHDRSNSINNNELLQCPLCPKKFRKHSLRAHLRNHTNERIFACSECDAKFARRHNLKNHMATKHAQQEKQQQAPKKSKETKKFQCGTCGKILAKKYSLKLHEQSHLEVVRRFPCRFEGCPYAGLTADALRTHLASHAQGSHKCTQENCSYVGKSQLHLKRHLKSHEKEGSEEGKWYSCDQCDFRARIKGHLRRHSQRHTGEKPHRCPHCDFQCSSFDNLRKHIVKTGKHPGKFIYECAACTVEQSADVFRSNSHKEYQLHLTTHKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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