Basic Information

Insect: Hypselothyrea guttata
Gene Symbol: -
Assembly: GCA_035045125.1
Location: JAWNNJ010001402.1:1163969-1166798[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.18 13 6.5 0.4 3 23 242 263 241 263 0.96

2 10 6.9 4.9e+02 1.6 0.4 6 23 272 289 272 290 0.84

3 10 0.00037 0.027 15.0 4.0 1 23 295 317 295 317 0.99

4 10 4 2.8e+02 2.3 6.0 1 23 326 348 326 348 0.95

5 10 0.011 0.75 10.4 2.6 2 23 357 379 353 379 0.90

6 10 0.00063 0.045 14.3 0.0 3 23 387 407 386 407 0.96

7 10 0.00081 0.057 13.9 1.3 2 23 416 438 415 438 0.97

8 10 3.2 2.2e+02 2.6 1.9 2 23 447 469 446 469 0.81

9 10 2.2e-07 1.6e-05 25.1 1.2 1 23 475 497 475 497 0.98

10 10 4.7e-06 0.00033 21.0 4.1 1 23 503 526 503 526 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.18	13	6.5	0.4	3	23	242	263	241	263	0.96
2	10	6.9	4.9e+02	1.6	0.4	6	23	272	289	272	290	0.84
3	10	0.00037	0.027	15.0	4.0	1	23	295	317	295	317	0.99
4	10	4	2.8e+02	2.3	6.0	1	23	326	348	326	348	0.95
5	10	0.011	0.75	10.4	2.6	2	23	357	379	353	379	0.90
6	10	0.00063	0.045	14.3	0.0	3	23	387	407	386	407	0.96
7	10	0.00081	0.057	13.9	1.3	2	23	416	438	415	438	0.97
8	10	3.2	2.2e+02	2.6	1.9	2	23	447	469	446	469	0.81
9	10	2.2e-07	1.6e-05	25.1	1.2	1	23	475	497	475	497	0.98
10	10	4.7e-06	0.00033	21.0	4.1	1	23	503	526	503	526	0.98

Sequence Information

Coding Sequence: atgtgTTTTCTGTGCACCAAGTGTACGGAGCGTGCAGCTGGAAATATAGAATTCGATTCCAGCGAAGCGGAAATACTGGAAATCAATGCAATTATAGAGAAGCATTTCTGGCTGCGGcGTGAAGAGATGCGGGGCCATGTGTGCACTGAATGCTGGgacaaattgtttgcatttcacACGTTCTACTTGAGCGTGGAAGAGGCGCACAAAAAACAAGTCGAGGCGCTTGAGGAGCTTGCAGTTCAGATGCCCAAAGAATTGATAACAATTGAGGAGCTGGAGTTGAGGGCAACGAGGGTGAAGCAGGAGCTGCCTGCCGTGGAGGGCGTGAAGCGTCGTCGAGGACGTCCAAGAAAGCAGCAGGCAGcggaggagcagcagaagcagcagcagcagcagctgaacagCAGCGAGTTTCAGGCGGTGCTGGAGCAGATTAATCTTAATGAGATCAAAATCGAGTTTCCCGAGACGGACCTCAGCATCTCCGATGTGCTGCAGGAtcaggaggagcagcaggaagataatgacgatgatgatgatgattatcTGGAGCACAGCGAAGCtgaagccaaaagcaaacccAAGCGTGTTTATCGCAAGACCAAAAAGCGTCGCAAACTGAAGCTGGAGGTGGTGAAGCGCAGCAAATCGGACAGCGGACACAATGTGAAGAAGTCCAAGGAGTTCAACGAGTACATCAAGGATCACTTTAAGATACTGTGCCACATCTGCCAGCTGCCCATGGCCGATTTCTCGCAGCTGCTCGTCCACACCCGCCAGGAGCACAATCAGCGCGGCTTTGCCGTCTGCTGCAATCGCAAGTTCCTCAAGCGCGGCGTGCTCGTCGACCATCTGCGCCGGCATCAGAATCCGGATCTCTTCAAGTGCCACATCTGCCACCGCGTGATGGGGCAGCGGCGCAGCCTCGAGCTGCACATGCGCATGCACGACATCAAGCAGCGCGGACGCCTCCATCAGTGCGATCAGTGCGCCAAGAGATTCTTCAGCTCCACGGTCTGCGAGCGCCACAAGCTGACGCACATTCCCAAGGAGCAGTGCCACGTGAGCTGCCTCACGTGCAGCAAGACCTTCCCCAACGAGTACCTCATGCAGCAGCATGTGAAGCTGGTGCATTTGCGCAAGTTCGACAGAATCTGCGACGTTTGCGGCAAGTCCATTAGGGGCAGGGAGGCGCTGGTGAGGCACATGGAGGAGCATGCGGGTGCACCACAGCAGGTGATCAAATGCCACCTCTGCGAGTCCACATTGACCACCAAATACGGCCTGGCGCGTCACATCAAAATGATGCACACCGAGGAGAACCTGCAGCCCATGCAGTGCCCCTACTGCCTCAAAATCTCGCCCAGCCTGCAGGCGCATCAGCACCATATCAAATACACCCATAATACTCTAAGGAAACATCAGTGTCCCATGTGCGAGAAGGCCTTCAAGCGACCCAACGAACTGCGTGAGCACATGACGACGCATACGGGCGAGGTGCTGTACACCTGTCCGCACTGTCCGAAGACCTTCAACTCGAATGCCAACATGCATGCGCATCGCAAGAAAATGCACTTTTCCGAATGGCAGGAATACCGCAATCAAAATCCGGATGCGCGCACCAGGAAGGCGGGCGCTATCATCGCCGTAAGCGTAAGGAAGACTACGGAAAGATCGGCTGCAGAAACTCAACAATCCAACCAATTGGAGTTGAATTCGGAATCGCTTAACATTTTGGAGTGTTGA
Protein Sequence: MCFLCTKCTERAAGNIEFDSSEAEILEINAIIEKHFWLRREEMRGHVCTECWDKLFAFHTFYLSVEEAHKKQVEALEELAVQMPKELITIEELELRATRVKQELPAVEGVKRRRGRPRKQQAAEEQQKQQQQQLNSSEFQAVLEQINLNEIKIEFPETDLSISDVLQDQEEQQEDNDDDDDDYLEHSEAEAKSKPKRVYRKTKKRRKLKLEVVKRSKSDSGHNVKKSKEFNEYIKDHFKILCHICQLPMADFSQLLVHTRQEHNQRGFAVCCNRKFLKRGVLVDHLRRHQNPDLFKCHICHRVMGQRRSLELHMRMHDIKQRGRLHQCDQCAKRFFSSTVCERHKLTHIPKEQCHVSCLTCSKTFPNEYLMQQHVKLVHLRKFDRICDVCGKSIRGREALVRHMEEHAGAPQQVIKCHLCESTLTTKYGLARHIKMMHTEENLQPMQCPYCLKISPSLQAHQHHIKYTHNTLRKHQCPMCEKAFKRPNELREHMTTHTGEVLYTCPHCPKTFNSNANMHAHRKKMHFSEWQEYRNQNPDARTRKAGAIIAVSVRKTTERSAAETQQSNQLELNSESLNILEC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -