Basic Information

Insect: Hypselothyrea guttata
Gene Symbol: -
Assembly: GCA_035045125.1
Location: JAWNNJ010000463.1:57708-62536[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00039 0.028 14.9 0.1 1 23 172 195 172 195 0.96

2 14 0.0014 0.099 13.2 2.9 2 23 244 266 240 266 0.89

3 14 0.00093 0.066 13.7 0.3 1 23 342 365 342 365 0.93

4 14 0.0095 0.68 10.6 3.2 2 23 414 436 413 436 0.96

5 14 0.0042 0.3 11.7 0.4 1 23 488 511 488 511 0.92

6 14 10 7.1e+02 1.0 0.0 2 13 530 541 529 546 0.81

7 14 0.0053 0.38 11.3 6.4 2 23 562 584 562 584 0.97

8 14 0.00085 0.06 13.9 0.0 1 23 672 695 672 695 0.95

9 14 7.8e-05 0.0056 17.1 0.2 1 23 741 764 741 764 0.93

10 14 0.0011 0.08 13.5 2.2 2 23 814 836 813 836 0.97

11 14 0.0028 0.2 12.2 1.5 1 23 920 943 920 943 0.91

12 14 0.051 3.6 8.3 1.5 1 21 995 1015 995 1016 0.95

13 14 3.9 2.8e+02 2.3 0.1 3 23 1080 1103 1079 1103 0.83

14 14 6.3 4.5e+02 1.7 0.7 1 9 1121 1129 1121 1145 0.62

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00039	0.028	14.9	0.1	1	23	172	195	172	195	0.96
2	14	0.0014	0.099	13.2	2.9	2	23	244	266	240	266	0.89
3	14	0.00093	0.066	13.7	0.3	1	23	342	365	342	365	0.93
4	14	0.0095	0.68	10.6	3.2	2	23	414	436	413	436	0.96
5	14	0.0042	0.3	11.7	0.4	1	23	488	511	488	511	0.92
6	14	10	7.1e+02	1.0	0.0	2	13	530	541	529	546	0.81
7	14	0.0053	0.38	11.3	6.4	2	23	562	584	562	584	0.97
8	14	0.00085	0.06	13.9	0.0	1	23	672	695	672	695	0.95
9	14	7.8e-05	0.0056	17.1	0.2	1	23	741	764	741	764	0.93
10	14	0.0011	0.08	13.5	2.2	2	23	814	836	813	836	0.97
11	14	0.0028	0.2	12.2	1.5	1	23	920	943	920	943	0.91
12	14	0.051	3.6	8.3	1.5	1	21	995	1015	995	1016	0.95
13	14	3.9	2.8e+02	2.3	0.1	3	23	1080	1103	1079	1103	0.83
14	14	6.3	4.5e+02	1.7	0.7	1	9	1121	1129	1121	1145	0.62

Sequence Information

Coding Sequence: ATGGAAGGCATGGATCTGTGGACGTCCATGTTTTCGGCCGACTTCGAcgaaggggagggggaggtggaaggcgaggaggaggagggcaATAACAACGGCGAGCTGCTgggcgaggaggaggaggaggagtaCGAGAACGGAAGCGGGGACTTCGACGaggacagcaacagcagacgcagcagagggggaaggggggccAAGGGACAAGAGCCCGATGACGATGccatatttgattttgagcTGGAACCGGTTGTGAGCATTGCCGAACCGGAAACGgagatggaaatggaaatggatgCGGAGCAGGAAGCGAATCGAATCTCGCGGCCACTGGCGCCGCCCATGCCCCATGCAGCTGGCATGCCTAggggcatgccacgcccatgcgTGACAGGCGCCCCTCCTGCCGCAGCGCGTGCTGCCACCAGCCTGCTCTCAATGCGCCCCACCACATCCCAGATCAATGCCACCGATGAGCACGGCGTGCCCATCAACTACGAGCTGGGCGTGATCTACATCTGCCCCGCCTGCGGGGCGGAGTACAGGCAGCAGGACATGTGGAAGCGGCACATGAACCAGGTGCACCAGTACAACACCCGCAAGGGGCTCAACTTTGTGGCCATGGACAAGCTGTACCATCGCTGCCTGGAGTGCAACAAGCGCATCGCGATGCACAGCCGGGAGAATCTGCTGAAGCACAAGTTCACGCATCTGCCGTATAGGTGCACCAAGTGCTACATCTGCAAGCGGGAGTACAAGTACCGCCAGGATCTGATGGTGCATCTGCGCATGGTGCACTGCGACGAGGTGGTGGCCATGATGCGCGACTCGGATCCCAAGGCGGGGCGCAAGACGCGCGTGCGGGAGCCACGCACCGAGCCGCTGGTGGCGCTTGCCGCCTCCGGCTTTATGCCGGATGAGGATGACATTGAGATCAGGAACGAGCCCATGGAGGCGGAGACCATCACCGAggagcgccagcagcagcccGCTGGCAACGACATCTGCGAGGATTACATCAACTACAGCTGCCCCGACTGCGGCACGGACTGCGACACGCAGGCGCAGTGGAATCAGCACATCGAGTTCGTGCACGATTACGTGAGCAGGCGGGGATTGAACTTCCGCAGCGTGGACATGCAGATGCAGTGCCTCGAGTGCAAGCAGTTCGTCATGCCCAACACCATCAAGACGCTGCGCGCGCACAAGTTCAGCCACCTGCCGCAGCCGGAGTGGATGCGCTGCAAGCTCTGCTACAAGGGCTACACGCAGCACCATGAGCTGGTGGCGCATCTGCTGAAGCAGCATCGTCTGCAGGCGCTGATGAGCGATGGGCTGGAGCCAGCAGCTGgcgaggagcagctgcagcaactggATGAGGATGGTGTGGCGCCGCTGGAGGAGGCGCCACGCCGTGGCGGACGCATTGGCAGCGACGATATGTTCGAGCCGCACATCGACTATCTGTGTCCGCAGTGTGGACGCGAGTTCTTCGAGCGGAAGCAGTGGCGCAAGCACGTGGTGAAGGCGCACGGCATGAGCGATCTGTCCAAGCTGAACTTCGAGGTGATCAACGATCGCCAGCTCAGGTGCACCGAGTGCGAGAAGATCATCACGAACGCCTACGGCATACAGAACGCGCAGCAGCATCGCATCACGCACCTGCCCTTCAAGGCGTACGCGCGCTGTTGCAAGTGCCACAAGTCCTACACGGATCGCAAGGGGCTGGTCAAGCATCTGTCCACCTACCATCGGGTTGGCTACGACACGCCCAAGGCAGCAAGAGTGGAGgtggaggcggaggaggaaGGAAGAGCAGCAGCCAAGACGCAGCGCAAACAGATTGTCACCGTGGCCAATGAGACCTACGAGATCATCTATCTGGACGAGGAGGAGGCGTGCAACGAGGAGAACGACTTTGgcgagcagctgcaggcggATGAGGAGGATTACGTCCTGCCAGTTAattccaatcccaatcccaatcccccTCCTCCTCCCTCTGCCAATCGCTACAAGTGCGTCGACTGCGGCAGCCTGTTTGCCACGCAGGCGGCGCTGCAGACGCACATCAGCGAGGAGCACGACTTCCtggataccctgtacccagCTCAGACTGCAGAGATGGATGCAGAgacggatgcggatgcggatgccaCTGCCGGCAGTTCAACTCTCATCAATCCCGCTGGACTGTCCACCATCGAGCAGAACTACATCTTTCTGTGCCCCTCGTGCGGCAAGGCGTACAAGACGCAGTTCGAGTGGCGGCGCCACATCAACGAGGCGCACAACTTCGACAAGCGGCAGCATCTGAACATGCGGCAGCTGGACAAGTATCGCTATCAGTGCACCCAGTGCAAGGACATCGTGTGCAACTCCAAGCTGAAGGGGCTGCAGGATCATCACTTCCGCCACCTGCCCTACAGGCTCTACCTCAAGTGCCTGGTGTGTGGCACGTGCTACAACCACAAGCCCAACATTGCCGCGCATCTGCGCACGCGCCACAACATCTACGAGCGCGAGACGCCCTGGCGGGACAGCCACGTGTcgggggcaaggggcaaggagcaggaggaggcaGGCAAGCAGGTTGCCCTCTCAGCCCCCTCAGCCTCCAGCTCCCCCCCGCATGCACCTTCAGTTGGACGCGTGCTGAAGCCACAGCCGGCGCTGCTTGCCACACGACCCGCCGGCCTCAACACGCTGGAGGACAGCATCTCGTACCACAATGCGGTGGACATGGACTTCATCACGTACTTCTGCCCCAAGTGCAACAAGAACTTCGACTCGCACGCCTTCTGGCGCAAGCACATCGTCGAGGtgcacaactacaacagccgGCAGGGGCTGAACTTCCGCCAGATCGACATCCACCACTATCTGTGCCTCGAGTGCTACAAGCGGGTCACCGTCACCCACACCAAGGGCGCCATCGGGCAGCTGCAGTCGCACAAGTTCCGCCACCTCCCCTTCCGCTCCTTCAAGTGCCTCACCTGCAACGGCGAGTTCGTGCGCAAGCAGATGTTCTTCAAGCACCTCAATCGGGACACCAACCGCTGCGACTTCAGGCCGCTGGGCAGCACGctgcaggaggagcaggagcaggcggaggcggaggaaCAGGAGCTGAGGCTCCTGTTGCCAGCTGTGAGCAtggaggagggggaggaggtGCTAcagcaggggcagaggcaggagCCGCAGGCGGTGGAGTCCGCTGCCTATACGCTGCTGTGTCCGCAGTGCGGCGACAActtcagcagcggcagcagggCGCAGTGGCGGGAGCACATCAACACGGAGCACGGCCTGGGCAAGCGGGAGGCGCTGCACATGCGGAGGATCGGGGAGGATCTGCACCGTTGCACGGACTGCGACGAGCAGCTGCAGACGCGGCAGCTGCGGGTGTTGCAGGAGCACCGCTTCCGGCATCTGCCCTGCGCCGCCTACATTCGCTGCCAGCTCTGCGAACGGCAGCCGGACGGACGGGGCGCTGTGGCAGCCGGACTGCACAGCATGcgggagctgcagcagcatctgcGGCAGCAGCATCCGGAGCAGCTGCAACGGCTGCATGAGCAGCAGGAGTCGGAGAGTAATGCCTACATGCCGCTGCCTGCGCATATGCTGCAGGAAGACGATCATGTGGCAGAGATCGAATCTGAAGATCAGTATCTGCTGGGATAA
Protein Sequence: MEGMDLWTSMFSADFDEGEGEVEGEEEEGNNNGELLGEEEEEEYENGSGDFDEDSNSRRSRGGRGAKGQEPDDDAIFDFELEPVVSIAEPETEMEMEMDAEQEANRISRPLAPPMPHAAGMPRGMPRPCVTGAPPAAARAATSLLSMRPTTSQINATDEHGVPINYELGVIYICPACGAEYRQQDMWKRHMNQVHQYNTRKGLNFVAMDKLYHRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMRDSDPKAGRKTRVREPRTEPLVALAASGFMPDEDDIEIRNEPMEAETITEERQQQPAGNDICEDYINYSCPDCGTDCDTQAQWNQHIEFVHDYVSRRGLNFRSVDMQMQCLECKQFVMPNTIKTLRAHKFSHLPQPEWMRCKLCYKGYTQHHELVAHLLKQHRLQALMSDGLEPAAGEEQLQQLDEDGVAPLEEAPRRGGRIGSDDMFEPHIDYLCPQCGREFFERKQWRKHVVKAHGMSDLSKLNFEVINDRQLRCTECEKIITNAYGIQNAQQHRITHLPFKAYARCCKCHKSYTDRKGLVKHLSTYHRVGYDTPKAARVEVEAEEEGRAAAKTQRKQIVTVANETYEIIYLDEEEACNEENDFGEQLQADEEDYVLPVNSNPNPNPPPPPSANRYKCVDCGSLFATQAALQTHISEEHDFLDTLYPAQTAEMDAETDADADATAGSSTLINPAGLSTIEQNYIFLCPSCGKAYKTQFEWRRHINEAHNFDKRQHLNMRQLDKYRYQCTQCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIYERETPWRDSHVSGARGKEQEEAGKQVALSAPSASSSPPHAPSVGRVLKPQPALLATRPAGLNTLEDSISYHNAVDMDFITYFCPKCNKNFDSHAFWRKHIVEVHNYNSRQGLNFRQIDIHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPFRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDFRPLGSTLQEEQEQAEAEEQELRLLLPAVSMEEGEEVLQQGQRQEPQAVESAAYTLLCPQCGDNFSSGSRAQWREHINTEHGLGKREALHMRRIGEDLHRCTDCDEQLQTRQLRVLQEHRFRHLPCAAYIRCQLCERQPDGRGAVAAGLHSMRELQQHLRQQHPEQLQRLHEQQESESNAYMPLPAHMLQEDDHVAEIESEDQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -