Basic Information

Insect: Hypselothyrea guttata
Gene Symbol: Trerf1
Assembly: GCA_035045125.1
Location: JAWNNJ010001866.1:280608-295783[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00014 0.0096 16.4 0.2 2 23 357 378 356 378 0.97

2 6 1.4e-05 0.00098 19.5 0.8 1 23 384 406 384 406 0.98

3 6 0.00042 0.03 14.8 2.5 1 23 412 436 412 437 0.94

4 6 0.0007 0.05 14.1 0.8 2 23 697 718 696 718 0.97

5 6 0.0019 0.14 12.7 0.1 1 23 1825 1849 1825 1849 0.98

6 6 9.3e-05 0.0066 16.9 0.8 1 23 1995 2017 1995 2017 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00014	0.0096	16.4	0.2	2	23	357	378	356	378	0.97
2	6	1.4e-05	0.00098	19.5	0.8	1	23	384	406	384	406	0.98
3	6	0.00042	0.03	14.8	2.5	1	23	412	436	412	437	0.94
4	6	0.0007	0.05	14.1	0.8	2	23	697	718	696	718	0.97
5	6	0.0019	0.14	12.7	0.1	1	23	1825	1849	1825	1849	0.98
6	6	9.3e-05	0.0066	16.9	0.8	1	23	1995	2017	1995	2017	0.98

Sequence Information

Coding Sequence: ATGGCTGCCATAAATACGGTACCAAAAAGCATACACCTGCCTTTGACGAGTATCAGCAACCCGTGTGTGTTGATGTGCAGCGCTTCTGTTGGCACTGAGGGATCCGTGACACTGCAACTGAGAgacaccaataccaatacatTGGCCACAGTCGACAATACAACGACAAGCAACAAAGCAACTGCTAtcttaacaacaacaacaacaacaacaactgcaacagcaacaccgacaacagcaacagcaacaacagcaatatgCAATCCCACTAATGGCGTCACATTGCTGGAGTCATCGTCAACGTTAGAGAATGCATTGAACATTGGATTTCCGGATCCGGGCATGTTAGCAGATGTTCTAGGCACCATACAGACAGCCTcatttaaGAATAagcacatcagcaacagcagcatctcTGGCACCAATATAAAACGCAGCATTAGCAACACTTGCCGAAGTAAGAGCAACAGCACTGCACCAACAATACTGAACAGTTCGAGCATTCAGCTGAACAATCCCAACAAAATAACCATTACCCGTCGTAGTGCCAGCAACAAGATCAGCGTGCAAACAGTGAGCACCTCGACGAACACCACCATTAGCAGCATTAGCGGCAGCAAAACCAACTACATTAAGAACTGTCTGatacgcagcagcagctgcagcaacaccGCCACCAATGCCTCGACATTGGCGCAGATTatgagcaacagcagcaccagcagcgcagccaatATACTGAatcagcacaacaacaacagcaactgcagcaacagcagcaacttcaGCAGCTTCAGCAACGCCTCCTCAgtgggcagcagcaacagcagcaccaacagcaatagcaacagcaacgacagcaacagcagcagtggccACAGTCTTACCTTCAAGAGCAGCGGTCGAAATGTTCCTGGCGTAGccaacacaacagcagcaacaaccaccagcaccagcagcgccaccaacaccaccaacACAACCACTGGCATAGGCATTGTTACCGTTGACCATACACCCAGGAAAAGCCGACCCAAGTTATCATCCCCAACACGCCACGGACCCCAGCAGTGTCAGATTTGTAGCAAGATCTTTGGAAATGCCTCGGCGTTGGCCAAGCACAAACTGACGCACAGCGACGAACGGAAATATATTTGCGCGCTCTGCGCGAAGGCATTCAAGCGTCAAGATCACTTAAACGGACACATGATGACTCATCGGAACAAGAAGCCTTACGAGTGTAAGGCGGATGGCTGTGGCAAATCGTATTGTGATGCACGCTCCCTGCGCCGTCACTCGGAAAATCAtcatggaggcgtggcaacgcCCACAAATAACTCGCTCTCACCCACGgccatcagcagctgcagcggcagcggcagcagcaacagcaacagcgccagCAGCGTAGGCGTGGCCAACAGTTCGCTCAGCCTATCGCCCGCCACCGCCAGTGGGGATGCGAGCTCCCCAGATGGCGCCACCTGTATACGCACCTATATATCCACAGGCAGCTCGGTTGTGGATGCAGCCACGGGCATTGCACTGTCCGATGAGCAAATCAAGGCTATGAATTTGCCAATTAAGACAGGCGTCACCTTGCTGTCGCCCACCACATCGACATCCTCGAATGCATCGTCTACGGCATCCTCATCATGCTCGTCCACCAATTGCAGCGTCAGTGGCAATGTCAACTCCATGCTGGCCAGCTCGCCCACCATAACGCTTAGCGATGGTGCCATGCTGGAGGGCGAGGGACTCACGCGGGAGCAGCTCGACTTGATAAGCAAGATTATGCAACAAACCAAGCAGACCAGCGCCCAGGTGACCGTCTCCTCCCCGACCAGTGTCAGTTCCTATAAGATCAACACCGAAACTACTGCCCCTGTACAAGCCAGACCACGTACCTGGAATATGCAATTGCTCAATAGTGCACAAAATGTTACCCTAACTGTTGAAGATGGCGCTGAACTGGTTGCTTCAGCTGTCAGCTCACCCGTTGAGATCAAAGAGGAGGAACTAGGCCAGCAAATTGTAGCCGCCATAAATCCCCACCTGTTGAACATTGTAAAGATCGACAAGCCAGTGGAGTGCAATCTGTGCCATCGCAAGTTCAAAAATATACCCGCACTCAATGGGCATATGCGCCTGCACGGCGGTTACTTCAAGAAGGACCCGGAAGCAAAGCGCAGCGAGAAGAAGGATTCCAGTGGACCTCCATTGCAGACAGCCAGCATTGGTGTACGCGCGCTGATTGAGGAGAAGATAATTAGCAAACGGAAGGATATCAGCAAGGGCGCCTTTGTAGTGCCCGCTCCACCAGGTACTGGCGGAACCACCAGCTGTGTAGCAACATCATCCGTTGGTCTGAATGGCAATTGTACTgtcagcagcaacggcaacaacagcagcagcttacGGCGTTCCATTTGTGAGCTGGAGACTTTCCTAAATCCAACGAGTCTTGGCCAAACCTTGgccagcagtagcagtagcagtagcagcacCACTACAGCGGTGCtgccagcagcaaccacaataaagAGCAGCAACGGTCTTAGCATACAGCAAATCGGTTTGCCGCAAAGCATTGAGATCTTCAGCGCCGCCCAAAGACAACATAAGACACTGAGTCTGGGCGGCGGTGCCAATACCATTACGATTACCACCAACAATGTGCCTACCACAACCACAATGAGTGCATTGACGGCACTCAAGGCTGGCAGCTGCATCAGCAGTGGCACCGGCAATGCGGATCCCAAGGATTCCACACTGATCGAGCTACTTAAGCGTGGCACACGCATTGCGGTTACCTCCAAGAAGCCAGCACCTGGTACCAATCTCCTGCTCAGCAATGTGTCCATGGGTGCTGCCGAGCTGACAGCCCTTGCCAGCGGAGGGCGCCAGATCATCACCAACAACAATCGCACTGTCATCATACCCTCGGATGTGCATGTGGTGTCCAGTAAGAGCAAGCTGAATGCCACTGGCAACAGCACCAGCGGGCATGCAACTCtcagcaatggcaacagcatCTCCTTGGCGGATGGCACTCCGCTCGCACTGGCGATTGCGGCGAATCAGGAGAGCCTGGGTGTGGTGTCCGAGGCAGGCACTATTAGTGATGATAGTGGTGTGTATACGGTGACGTATACTAGCGATGGGGATGCAACGGAACTGTTTGATGATGCCGAGGTGTATAATGTGACGGATACGGAGATGTTGCTGCAAACCGTCGACACCATGGAGCTGCTGCAcgacgatgaggatgaggCACACAAGAGCGAACATTCCGAGGACTTTGCTTTGTTAAACGAAACCACACCATTGATCAAACTGGAGAGTCCAGAGCCCAGCACGGTGAATCAACAAACCACAACTCCGCTTCCCACCTTCCAACAATTTCATTCCAAGGAGCTCATCATGCAGAATAGCTCACAAATCCAAGCCATTGCCAGCAtgcgtggcagcaacaacatggtTGTGCTGGCATCTCCCTTGCACTCGCCATTGGCATATCCAACACCGCCATCGAGCCACGAGAATGTGGCGCAATCTTCGCCATTCGTGGAAGATGCAGCAGCTCAGTTTGTGGATGCCAGCCATACCTTCTTTGGCGAGAAGACAGACTTCTCGCATGTGTACTTCAAGACGGATGAAGATGGCGTACAACAGCTGAGTGAGAACGATAACGAGAAGAtactgaaactgaaaacagTGCTCGAGGAGAGCAGCTTCGAACCAACCATAAAAGTTGAGGATCTCCTGAATAGCTCGGAGGATGATACTGGCTGCGATCTGCGTGAATTTGCAGAGACAAATCTGTCGTTTCTCGATGAGGATCAGGAGTTTCTAAATGATTCACGCAATGCCACCTCGCCGCTCTCCGAGTCGTTCTTTACCAGCGGCATTGGCTCGGCGGAGGATGTGAAACAAGTGCTACGTGAGGTTTTGCCAGAAGAGAACATGCAGATGCAGCTAAGCAGCGAACAGCAGGGGGAGAATATAATTGATCTCTACTATCTGCCCGGACTGGGACTGCAGTCGCAAATGATGCCCAACTCAGACGATCCGCTGCTCTCGTCCTCACCGCGGGAGTTCGGTCAACAGCGACAGGTACTGCACACGGCTAACACAACTTTGCCCTCCATGGAGCAATCCAGCACGGTTCTTtatgagcagcaacagcaagagcagcagcagcaaccacaaacagtccagcagcagcagcaacagcaacagcagcagcaacaacagcagcaacagcagcagcaacagtctgAGCCCCAGGAGGAGCAACAGCTGTTGTCCCAACAAGCTGTCATACAAACGGAAccagcgcaacagcagcagcaacagcaacagcagcaggaacagcCGCAGACAGCTGAGTACATGTTATCCACATTCAGCCAGGTGTCCTGTCAAACGCAGTACGTGGACAACAGTCAGCAATCCATGACGCTGCAGCCACTGAACAGCCTGTTGCAGCCGTTACTCTATggcggcagcagcaccgcaggaGAGAGTGCTCTGCTGAGCAGTAATGCTGGTGGGCAAACAACGGTGCTGGAtggaaatacattttatacgtACGGGGAGAGCAGCGCTGTTAACAGCTGTCAGAAGCCGGCGTTGGCTACCGTGAGCACATCCATCATAACTCCCAGCACCACTCCGAGCGTTTCTAATCTGCAGCCATTGTCGAACCAAACGAATTCCATACTAAAACGCCGTTTGCGTTCGAATGGAGTGCAGGATGTGCACAAGTTTTCCAAATTCCATACACTATCGCCGCATCGCTCCAAGCTGAGGAAACCCTCACGTACCCACTACACTCCAGCTCCGATACTCAATCCCGAACGCAAGGGTACCGGACTCTACTGCAATGTGCGCAAGCAGCTGGGACAGGGCATATTCGATGTGTTTGACGATGACTTTGGTGACCCCGTCGGTCTGGTGGATTTCTCCGACGAGTCTAAGGTGAATCTGGGCTCAACCTATCAAGTACAGATACCTGCTTGGAAGCCCGTAGACCCCAACACCAAAGACTCAATAGGTGCCGATTTGATTTGGGATCCGTGCGTACAGCTTGACGAGAAGATACTCATGCGGTATATAGATCTCAGTAAATCCTCAGCCGTACCCATGGGTAGTCACTCGGAAGAGGTCGCCCTCCAAACCCTGCTCGAGGCTAAGGGCAACTCAGCTGCAGCCGTCCTCACACTGCTGCAAACTCAGTCCAGCGCATTCCAAATGAAGTGGACTGCCTATGAGCTAGAGCAGTTTCTGCGTGGCCTAGAGAAACACGGCAAGGACTTTGGCAAAATAGCCGATGATCTACTCACCAAGACTTCGGGCGAATGTGTACAGATGTATTACTTTTGGAAGAAGCTCTGTGTGGACTACAAGGTGTCCCATCTGAAAATGGAGCCGGTTACCCCAATCACTCCAACGGTGGAGCAGAAACCCTACGTCTGCGAGATAGCCGACTGTTCAGCGAGCTTCAGTTCCAAAGCGGCGCTGCACGGTCATGTACGCATACATGCTTATGGCAGAAAtgccagcaacaataacagtagCCACACtcagaacaacagcaacagcaacaacaacaataataatcacaacaacaacaacaatcagcatGTCACGGTAATTagtgccaacagcaacaatcacacttgcagcaacaacagcaataacagcaacagcagcaacgcaTGCGCACCCCCAATTAGCAACAATGCCAATCATTGCATTAATGCAAccattgcaactgcaactgcagcaacaaccatAATAAAactcagcaacaataacaacaacatgcacAACATGAGCAATACCAATCCACAAAATGCAGCATTGCTAACtgtcgcagcagcaacagttgccgcaaCGGCAACAGCTTCAGCTTTGAAGgacaacagcaatggcaacatcaacagcagcaataccAATATTGTCAAGGACACAGAGTTTCCCTGCAAGGTGTGCGGCAAAGTGTTCAATAAGGTCAAGAGTCGCAGCGCACATATGAAGACCCATCGGGTGCAGGATGCAGACCCCACAACCAATTCCAAACATCAGCCCCCTGCCAATGGAGGCGCCATTTCCTCTGCAGTATCAGCCACGGctccagctacagctacagctgcgGCTACAGTCTCCGCCTGA
Protein Sequence: MAAINTVPKSIHLPLTSISNPCVLMCSASVGTEGSVTLQLRDTNTNTLATVDNTTTSNKATAILTTTTTTTTATATPTTATATTAICNPTNGVTLLESSSTLENALNIGFPDPGMLADVLGTIQTASFKNKHISNSSISGTNIKRSISNTCRSKSNSTAPTILNSSSIQLNNPNKITITRRSASNKISVQTVSTSTNTTISSISGSKTNYIKNCLIRSSSCSNTATNASTLAQIMSNSSTSSAANILNQHNNNSNCSNSSNFSSFSNASSVGSSNSSTNSNSNSNDSNSSSGHSLTFKSSGRNVPGVANTTAATTTSTSSATNTTNTTTGIGIVTVDHTPRKSRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYICALCAKAFKRQDHLNGHMMTHRNKKPYECKADGCGKSYCDARSLRRHSENHHGGVATPTNNSLSPTAISSCSGSGSSNSNSASSVGVANSSLSLSPATASGDASSPDGATCIRTYISTGSSVVDAATGIALSDEQIKAMNLPIKTGVTLLSPTTSTSSNASSTASSSCSSTNCSVSGNVNSMLASSPTITLSDGAMLEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVSSYKINTETTAPVQARPRTWNMQLLNSAQNVTLTVEDGAELVASAVSSPVEIKEEELGQQIVAAINPHLLNIVKIDKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPEAKRSEKKDSSGPPLQTASIGVRALIEEKIISKRKDISKGAFVVPAPPGTGGTTSCVATSSVGLNGNCTVSSNGNNSSSLRRSICELETFLNPTSLGQTLASSSSSSSSTTTAVLPAATTIKSSNGLSIQQIGLPQSIEIFSAAQRQHKTLSLGGGANTITITTNNVPTTTTMSALTALKAGSCISSGTGNADPKDSTLIELLKRGTRIAVTSKKPAPGTNLLLSNVSMGAAELTALASGGRQIITNNNRTVIIPSDVHVVSSKSKLNATGNSTSGHATLSNGNSISLADGTPLALAIAANQESLGVVSEAGTISDDSGVYTVTYTSDGDATELFDDAEVYNVTDTEMLLQTVDTMELLHDDEDEAHKSEHSEDFALLNETTPLIKLESPEPSTVNQQTTTPLPTFQQFHSKELIMQNSSQIQAIASMRGSNNMVVLASPLHSPLAYPTPPSSHENVAQSSPFVEDAAAQFVDASHTFFGEKTDFSHVYFKTDEDGVQQLSENDNEKILKLKTVLEESSFEPTIKVEDLLNSSEDDTGCDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEDVKQVLREVLPEENMQMQLSSEQQGENIIDLYYLPGLGLQSQMMPNSDDPLLSSSPREFGQQRQVLHTANTTLPSMEQSSTVLYEQQQQEQQQQPQTVQQQQQQQQQQQQQQQQQQQQSEPQEEQQLLSQQAVIQTEPAQQQQQQQQQQEQPQTAEYMLSTFSQVSCQTQYVDNSQQSMTLQPLNSLLQPLLYGGSSTAGESALLSSNAGGQTTVLDGNTFYTYGESSAVNSCQKPALATVSTSIITPSTTPSVSNLQPLSNQTNSILKRRLRSNGVQDVHKFSKFHTLSPHRSKLRKPSRTHYTPAPILNPERKGTGLYCNVRKQLGQGIFDVFDDDFGDPVGLVDFSDESKVNLGSTYQVQIPAWKPVDPNTKDSIGADLIWDPCVQLDEKILMRYIDLSKSSAVPMGSHSEEVALQTLLEAKGNSAAAVLTLLQTQSSAFQMKWTAYELEQFLRGLEKHGKDFGKIADDLLTKTSGECVQMYYFWKKLCVDYKVSHLKMEPVTPITPTVEQKPYVCEIADCSASFSSKAALHGHVRIHAYGRNASNNNSSHTQNNSNSNNNNNNHNNNNNQHVTVISANSNNHTCSNNSNNSNSSNACAPPISNNANHCINATIATATAATTIIKLSNNNNNMHNMSNTNPQNAALLTVAAATVAATATASALKDNSNGNINSSNTNIVKDTEFPCKVCGKVFNKVKSRSAHMKTHRVQDADPTTNSKHQPPANGGAISSAVSATAPATATAAATVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00832093;
90% Identity: iTF_00832093;
80% Identity: iTF_00832093;