Hgut016235.1
Basic Information
- Insect
- Hypselothyrea guttata
- Gene Symbol
- -
- Assembly
- GCA_035045125.1
- Location
- JAWNNJ010002393.1:2358691-2361138[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.068 4.8 7.9 5.9 3 23 231 251 229 251 0.96 2 12 0.011 0.75 10.4 0.4 1 23 257 282 257 282 0.92 3 12 0.0048 0.34 11.5 0.9 2 23 290 314 289 314 0.93 4 12 0.00022 0.016 15.7 2.0 1 23 326 348 326 348 0.98 5 12 2.3e-06 0.00016 21.9 0.2 1 23 355 377 355 377 0.98 6 12 0.0066 0.47 11.0 0.1 1 23 383 405 383 405 0.98 7 12 0.0064 0.46 11.1 4.0 1 23 411 434 411 434 0.98 8 12 0.0088 0.62 10.7 3.9 1 23 440 462 440 462 0.96 9 12 0.00015 0.011 16.2 3.6 2 23 469 490 468 490 0.96 10 12 0.00071 0.051 14.1 0.6 1 23 588 611 588 611 0.95 11 12 0.01 0.73 10.4 1.2 1 19 617 635 617 639 0.94 12 12 1.7e-06 0.00012 22.3 4.1 1 23 645 667 645 667 0.99
Sequence Information
- Coding Sequence
- atgCATGAGGGGAGTGCATACTCCTTGCACTCACTATGCCGCATctgcctgcagcagctgcaagccGATGCCGCCTTCGATCTGTTCCTGGTGCCTGGTCTGGCCAAGAAACTCTGCTTCCTCACCTCCCTCTCCGTGGAGCAGCAGGACGGATTTCCCAATCAGCTGTGCAACGgctgttacgtccgactgaacgaTCTGCATGAGTTCCAGCAGCTGTGCGTGGCCTCCGTGCAGCGGTTTCAACAGATGCTGGAGgaggcagcgacgtcgacgtcggctgTTCAGATAGATGGCTTTGAGGTGCTgcaggaggcggaggaggaggagcacgTGAACTATGATCCGCTGCTGAATCACAAGCTGGAGCTGATTGAGAACGAGGAGGATGTATTCAAGATGCTGGAGCACTGCGACAAGGAGGCGCAGGAGGTGGAGCAGTTTGTCAAGCAGGATGCGGACGAACTGCTGGACGAGGAATCCTCCATAGAGAGCAGCTATGAGCAGGAGCAGGCTGTGAGCAGTGAAGGTGAGGGCGAGGGTGAGGGCGAAGTCGACGCCGATGCCGATGAGGACGACGATGATACGCCGCTGGCGCAgcgtttacagggtatgcgcgGCAAGCATGTGGAGCACAGCAGGCGCAAACGCATTCCGGCTGCTGAGCGGCATCTGCATCGCATCATCGACTGCCACATCTGCCATCAGAAGTTCAAGAAGGCCATACGCTACGAGGAGCACATGAAGCATCACAACGATCTGCTGCCCTTCCAGTGCAAGGTGGAGAGCTGCCGCAAGGGATTCACCACAGCCGGAGGACTGCGTCTGCATGTGGATCATGCGCACACGGAGCTCTCCGAGGTGCATGCCTGCAGCGTGCAGGGCTGTGGCAAGAGTTTTCCACGCATACGCCTGCTGACCTTCCACATGAAGAAGGTGCACAACATCTCGAAGGCGGCGGCGCCGCCCAGAGATTACCCCTGCAGCGAATGCGACAAGATCTTCCGCTGCCCCATGGCGTTGAAGAAGCATATGTACAAGCACGATGGCAAGGAGCTGCCGTTTCCCTGCAACATCTGTGGCAAACGCTTTGTGATCAACAGCGCGCTCAAGGATCATCTGATGCGGCATGCGGGGATCAAGAACTACGTCTGTCCGTATTGTGGCGTTGGGAAGACCACCAGGCAGGAGTGGAACACGCACATCCTGACGCACACGCAGGAGAAGAAGTTCAAGTGCCACATATGCGAGCATGCCTCGCACAACAAGCAGAGTCTGGCCAACCACATCAAGATCGTGCACGAGAAGATCAAGAACTACGCCTGCCAGTACTGTGGCAAGACCTTCGGGAAATCGCATGCCTGCAAGATACACGAGATGACGCACACGGGGGAGAAGCGCTGCGAGTGCAAGGTGTGTGGCAAGAAGTTTCTCTACCCAAAGAGCCTGACCAAGCATCTGAAGACGCACGAGAAGCGCGTGCTGCGCGCCATCGAAACCTATCGCCAGCGTCAGGCGGAGCTGGGCGAGCACATGGCAACTGATGCAGTTGCAGCTACGGATGCAGTTGCTCcaactgccgctgccgccgatGAGCTGCTGAAAGTCTGCGCCGAATCGGTGGCCACCATACCCAAGGATCCGCGTCGTGTGCAGCGCGTGGACATCGCACAGCTGGCGGGCACCGCTGTGAATCCCATCAGCTCCGTGGCGGTGCCGTCGTGGTCGCCGCAGCTCAACTTCACCAAGAAGGAGGGCAAGCACATCTGCCCCAGCTGCGGGCAGGGCTTCAACAACATTGGCAACATGAAGCGGCACTTCAAGATCATACACGAGAAGGTCAAGGATTTCGCCTGCCGCTTCTGCCCCAAGCGCTTCGCCAAGGCGCAGACGCTGCGCCATCACGAGTGGATACACACCGGGGAGAAACCGTTTGAGTGCAAGACCTGCGGCACGCATTTCCGGCAGGAGACGGCGCTGAAGCGGCATCAGCGCACGCACGAGAATCGTCCGCCCGTCATCTCCTCCAAGTTCTATGCGGCGCgggaggagctggagcagcaggagcgcTCGAAGCGGGAGGCCAGACGCAAGGCGGAGCTGAAGCGACGCGAGATCGCGGAGGCGGCCAAGCAGCAGCTCTCCTCGCTGCACCACATCGAGATCAGCGATCAGCAGCTGCACTCCTACGATGAATACCAGGAGGCAGCTGCCGAGCGTGCCGCTGCCTCGGCGGAGCTGCAGGCGCAACAGTTCGAGGAGAACGAGCTGAAGCGGAGGGCGGACGAGGAGCGGCTCAAGGTGCAGGCGGCCGCCCATGAGCAgctgcagaagctgcagcagcagcagcagctggacaaGGAGCAGAGCTCCTACGACGGCTACTACGCGCAGAAGGCCCAGGCGGACGGCACCTCGCTCCAGGAATTCAAACTCGATCATGTCTAa
- Protein Sequence
- MHEGSAYSLHSLCRICLQQLQADAAFDLFLVPGLAKKLCFLTSLSVEQQDGFPNQLCNGCYVRLNDLHEFQQLCVASVQRFQQMLEEAATSTSAVQIDGFEVLQEAEEEEHVNYDPLLNHKLELIENEEDVFKMLEHCDKEAQEVEQFVKQDADELLDEESSIESSYEQEQAVSSEGEGEGEGEVDADADEDDDDTPLAQRLQGMRGKHVEHSRRKRIPAAERHLHRIIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCKVESCRKGFTTAGGLRLHVDHAHTELSEVHACSVQGCGKSFPRIRLLTFHMKKVHNISKAAAPPRDYPCSECDKIFRCPMALKKHMYKHDGKELPFPCNICGKRFVINSALKDHLMRHAGIKNYVCPYCGVGKTTRQEWNTHILTHTQEKKFKCHICEHASHNKQSLANHIKIVHEKIKNYACQYCGKTFGKSHACKIHEMTHTGEKRCECKVCGKKFLYPKSLTKHLKTHEKRVLRAIETYRQRQAELGEHMATDAVAATDAVAPTAAAADELLKVCAESVATIPKDPRRVQRVDIAQLAGTAVNPISSVAVPSWSPQLNFTKKEGKHICPSCGQGFNNIGNMKRHFKIIHEKVKDFACRFCPKRFAKAQTLRHHEWIHTGEKPFECKTCGTHFRQETALKRHQRTHENRPPVISSKFYAAREELEQQERSKREARRKAELKRREIAEAAKQQLSSLHHIEISDQQLHSYDEYQEAAAERAAASAELQAQQFEENELKRRADEERLKVQAAAHEQLQKLQQQQQLDKEQSSYDGYYAQKAQADGTSLQEFKLDHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -