Hgut015774.1
Basic Information
- Insect
- Hypselothyrea guttata
- Gene Symbol
- -
- Assembly
- GCA_035045125.1
- Location
- JAWNNJ010002372.1:28292-32876[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.3 2.4e+02 2.6 0.1 2 23 114 136 113 136 0.90 2 13 0.007 0.5 11.0 1.2 2 23 145 167 144 167 0.93 3 13 6 4.3e+02 1.7 0.9 12 23 179 191 178 191 0.91 4 13 0.0054 0.39 11.3 9.0 2 23 420 441 420 441 0.97 5 13 1.1e-06 7.8e-05 22.9 2.8 1 23 447 470 447 470 0.96 6 13 0.00019 0.014 15.9 0.6 1 23 475 498 475 498 0.96 7 13 0.00018 0.012 16.0 4.5 1 23 516 538 516 538 0.96 8 13 0.00012 0.0082 16.6 1.6 1 23 543 565 543 565 0.98 9 13 3e-05 0.0021 18.4 1.7 1 23 571 593 571 593 0.95 10 13 2.2e-05 0.0015 18.9 0.7 1 23 599 621 599 621 0.98 11 13 3.1e-07 2.2e-05 24.7 2.7 3 23 629 649 628 649 0.99 12 13 2.1e-08 1.5e-06 28.4 1.0 1 23 655 677 655 677 0.99 13 13 1.4 1e+02 3.7 5.2 1 19 682 700 682 705 0.88
Sequence Information
- Coding Sequence
- ATGCCGGACACGGAGCCGCCGTACGGTAATTTCGACGCAGAGCGCGTCTGTCGCGTCTGCCTGAGCGAGGTGGGCGAGTTCTGCTTCATCTACGACGAGGCGCCCGTGGAGCAGGGGGCGAACCTGGCGCAGATCCTCAACGAGTGCACTAGCTACGCGTGCGAGCGGTTCGATGGAATGCCGCATCACATGTGCGACACGTGCAACAAGGCCGCCTGCCAGGCGTACCGCTTCAAGCTGGATGCAGAGAAGGCCCATCGCTCCCTGTGCTCCATGCTGGGACGCACGCCCTCCATTGGCTCCAATCGCAGCGATGTGTGCACCCAAACGGAGCTGCTTCCGTGCGGCATCTGCGACGACATGTTCCTCAACGTGCTCGATCTGCGCATGCATCGGCGCAGCCGACACCAGAGCGCAACCGAACTGGAGCTGCGCTGCAAGCTGTGCGATGCACGCTTCTCCGCCTACCGCCAGCTGCGCAATCATCTGACGCAACGGCACGATGAGCCGGCGCTCGCGCTTCTGTTACCACATCGCCAGGATCAGTTCGTGCGGCACATGCAGAGCGTGCATCGTGTGGCgcaggaggaggcggaggcgcAACGACGCCGATGCCGGCGACGGCAACGACGTGGGCAGCAGACGGCACAGACCAAGCACAGCGCCTGGCTGATCGATGAGGCAACCATGCAGAGCGGCGATGAGCTGGAGTCGACGACATTGCTGCTGAATGCCAGCGCCGTCTCCGAGCACAGCCACAATGAGGATAACAACGATCAGCACACCAATCCCATATCCAGCAACGAGGAGGCCGACGATGATGAGGCCAAGAAGTCGCTCTGGCTGCACATCAAGCCAGAGCCGGAGCCCGAGCTGCAGCCGGATGTCGAGGGCAGAAGAAGGCCCGCCAAGCAGACGCTGGTGAAGGAGGAGCCAATCGCTACCGAGCAGGCGGAGCAGCAGCTAAGCATTAAgcaggatgaggatgaggatgaggaggagctGGGGCTGGAGCTGGACGAGGATGATGACAACTTGCGCAGCTCGGATGAGCAGGACTTGGACTTGGCTGACTACGATGAGGATGAGAATGAGGATGAGGAAGACGAAGCGGCGGCGGAAATGGAAGCAGAATCGCAGCCAGCAAACTCCAGAGCAACTTCTGGTCAGGTGCAGATGGTGCGCGAGTATCTGAAGAAGCCACGTCGACGACGTCGCAGCAACAGGCAGGAGGATGCCACAGGCAATCCGGAGAATCGCTGCGAGATCTGCCAGCGCACCTTCTCCCGCCACTGCCATCTGCTGCGGCACAAGCTGTCGCATCTGGAGAAGAAGCCGCACAGCTGTCCGCACTGCCCCAAGGCGTTCGCGCGCAGCGATCACCTGAAGGCGCACGTGCAGAGTCTGCACGCGACCAAGGAGCACAAATGCCAGCTCTGCGATGCCGCCTTCGCCCGCCTCGACGCCCTCGAGCGGCACAAGCTGAGCAAGCACAACGGCGAGGGCCTGGATGCCACTAGCGACCTCAAGGTGCACATCCAGGAGCACACCTGCGAATACTGCGCCAAGCGCTTCTCCAGCAAAACGTATCTGCGCAAGCACAAGCTCCTACACACCGAGTTCCTCTACGCCTGCAAGAGCTGTGACGAGACGTTCAAAGAGCGACAGCAGCTGCGCAGTCACGAGAAGACCCACACCGGGCAGCGCAACTTCCTCTGCTGCATCTGCGGCGACAGCTTCGCCCGCAACGACTATCTGCGCGTCCACATGCGGCGCCACAACGGCGAGAAGCCCTACAAGTGCCGCTACTGCGTCAAGGCCTTTCCGCGTGCCACGGATCTCAAGGTCCACGAGCGCTATCACACCAACACCAAGCCCAATTTGTGCAACACGTGCGGCAAGAGCTTCCACCGCGCCTACAACCTGACCATCCACATGCGGACGCACACGGGCGAGCGTCCCTACAAGTGCGATCAGTGCCCGAAGAGCTTCAGCCAGAGCAACGACCTCAAGGCGCACATCCGGCGGCACACGGGGGAGCGCTACAAGTGCCCCCATTGCGACGCCTACTTCCTGCAGCTGTACCACATGCGCAACCATTGCCTCAGCGCCCACAACAAGCACATCGAGACCAAGACGGGGCGCCTCCAGCGCATTGGGCTGCTCGACGAGGGCAGCCACAATCACCTGACCACCGTGGTCATGCCACCGACCAACATGACGGCCACAGCCACATCTGCCACTCcagccacagctgccacaatcATGCATTCGCCTGCCGCATACAACATCACATCGCCAGTCTCTGCCTCAGCTGCAGCCTCGATCTCCACGGGCGCTCCAACCCAACCATCTGTGCCTCTGCAGGCGGAGGGGCATGGTTTTGCGGGCGCAGCGGCGGCGCCAGCTTTTGGGGCATTCAACATAACGCCTGTTGTCATGGCTCAATTGATGTACAATCACAGTGGCAACAGTCAACAGAGCAACGCCAGCGGCAGCGAGGCAGGCAAATAA
- Protein Sequence
- MPDTEPPYGNFDAERVCRVCLSEVGEFCFIYDEAPVEQGANLAQILNECTSYACERFDGMPHHMCDTCNKAACQAYRFKLDAEKAHRSLCSMLGRTPSIGSNRSDVCTQTELLPCGICDDMFLNVLDLRMHRRSRHQSATELELRCKLCDARFSAYRQLRNHLTQRHDEPALALLLPHRQDQFVRHMQSVHRVAQEEAEAQRRRCRRRQRRGQQTAQTKHSAWLIDEATMQSGDELESTTLLLNASAVSEHSHNEDNNDQHTNPISSNEEADDDEAKKSLWLHIKPEPEPELQPDVEGRRRPAKQTLVKEEPIATEQAEQQLSIKQDEDEDEEELGLELDEDDDNLRSSDEQDLDLADYDEDENEDEEDEAAAEMEAESQPANSRATSGQVQMVREYLKKPRRRRRSNRQEDATGNPENRCEICQRTFSRHCHLLRHKLSHLEKKPHSCPHCPKAFARSDHLKAHVQSLHATKEHKCQLCDAAFARLDALERHKLSKHNGEGLDATSDLKVHIQEHTCEYCAKRFSSKTYLRKHKLLHTEFLYACKSCDETFKERQQLRSHEKTHTGQRNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRYCVKAFPRATDLKVHERYHTNTKPNLCNTCGKSFHRAYNLTIHMRTHTGERPYKCDQCPKSFSQSNDLKAHIRRHTGERYKCPHCDAYFLQLYHMRNHCLSAHNKHIETKTGRLQRIGLLDEGSHNHLTTVVMPPTNMTATATSATPATAATIMHSPAAYNITSPVSASAAASISTGAPTQPSVPLQAEGHGFAGAAAAPAFGAFNITPVVMAQLMYNHSGNSQQSNASGSEAGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -