Basic Information

Gene Symbol
hang
Assembly
GCA_035045125.1
Location
JAWNNJ010001757.1:38493-61258[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.35 25 5.6 1.0 3 23 592 613 591 613 0.93
2 17 1 73 4.2 3.2 3 22 720 739 718 739 0.89
3 17 0.00076 0.054 14.0 3.3 1 22 843 864 843 866 0.90
4 17 0.088 6.3 7.5 0.1 2 21 878 897 877 898 0.93
5 17 0.00089 0.063 13.8 0.2 2 23 1038 1060 1037 1060 0.95
6 17 0.0025 0.18 12.4 0.1 1 23 1068 1091 1068 1091 0.96
7 17 2.1e-05 0.0015 18.9 0.1 2 23 1178 1199 1177 1199 0.97
8 17 0.00037 0.026 15.0 2.9 2 23 1319 1341 1318 1341 0.97
9 17 0.029 2 9.0 0.2 2 23 1350 1372 1349 1372 0.95
10 17 0.0039 0.27 11.8 0.6 1 23 1385 1408 1385 1408 0.97
11 17 0.00016 0.011 16.1 1.1 1 23 1452 1474 1452 1474 0.99
12 17 0.0025 0.18 12.4 0.9 1 23 1482 1505 1482 1505 0.96
13 17 9.2e-05 0.0065 16.9 0.4 3 23 1630 1650 1629 1650 0.98
14 17 0.0064 0.46 11.1 0.1 1 23 1685 1707 1685 1707 0.97
15 17 0.00075 0.054 14.0 0.6 2 23 1808 1830 1807 1830 0.93
16 17 0.7 50 4.7 0.1 2 20 1850 1868 1849 1870 0.91
17 17 0.0082 0.58 10.8 0.3 3 23 1885 1905 1885 1905 0.98

Sequence Information

Coding Sequence
ATGGTTgcctgcctctgccgctgcctctgcctctgcctctgctcaCTGGCCTGCGCCCCCGGCAACGACAACATCAACTACGTCGGCGTCGtcttcgtcgtcgtcgttgtcgtcatcgtcgtcgtcggcgtCGGCATGTTGCCTCTGCGTGTGCTTGGCTGGCGTTGGCCTCAGCTCTGGGCTGCTCTTTGGTTTCGCTTTGGCTCGATTTCATGCCCACATGTCCTGGAGCTTTGTGCTGTAACAAATTGTGATTTAGCCGCCATCACATCTCTGGATCGGCTGTCGCTGCacatctgccacgcctgcatCAGCTACTTGAACTCCTGGCAGAGCTTCAAGAATCGCTGCCTCAGCGCGCAGTCGAAGCAGCGCCAATGGCTGGAGGCGGACAGGAGCAAGCAGCAGACGCTGCTGGGCTACTTGGACTTGAACAGAGCCGAGAACGGCAATGTTGCTCTCacagaacagcagcagcaacaacagcagcagcaacagcagcaacagcagcaacaacagcagcagcaacaatccgAGTTGAAAAGTGAAGCGgccaaagcagcagaaaaGGTTTCCGCCAACATATTGGATGGTATACCCTCGTTGAAGAAGCGCAAATCGTTAACAGTCTATGTGAGTCccaagcaacagctgcaacaacagctgcaacaacagcagcaacaacaacagcaacaacagcaatcggTCAGAACGACGAGCGCGGCGGCGGAAACAAAGCAAACGTTGCACAATCTTTTATTGCAGGTGCCCTCAGCAACGACAACggcaatgcagcagcagcaacatcgcaaataccatcaacagcagcagcagcaacagcaacgtgTGGGccggcagcaacatcagctgcatcaacaacaacatcaacatcatcaacatcaacatcaacatcatcatcaccatcatcagcagcagcagcagcaacatcagccacATCGACATCAACGACGCAAgcgtcagcagcaacaacagccagcgattgcagctgccactgcaacagcaacagcagcagcaactgctgctgctgtgcaacGCATGGCCAAGTTCAAGCCCAAGTTGTACTTGCCACTGGATATTGCGGTGCCTCCGCTGccgccactgccactgccacagttgccagcaacagcaacagttacagcagcaactgttgctgctgctgctgctgctgttgttaacacggcaactgttgctgccgctgccgactcattgccattgccgttgtCGCTGCCAATTGATTTCAGCCAGAATTCCACTCCGAATTTGAATCCGATTTCCAATGCCAATCCCATTCGGAATCCCACTCCGAATCCTATTCCGAATCCTAGATTTAGCAGCGTTTTGCaaccaccgccgccgccgcctctgccgctgccgctggcgTTGCTGCCACCGCTGGCTCAGCCTCCAGTTGCAACATTGACTAGCAACAGcaatgcaacagcagccgctgctgctgttgccacggTCGCCACACCGCTGCTCATGCCGCCCCTGCCCGCGCTGCCCATCAAGGATGAGCCGCTGGATGACACGGACGATGACTTCCAGATGAAGTGCAATGACGAGTCCGATGACATGATGGATCCCACAATGTTCCTAGAACGCTCCGAGCACGAGGGCGACGTACCATTAATGACCTCGGACTATGACTATACGGCCCAGCATGGCGTTACggctgttgtggcagctgcctcGCTGCCAGCGAGCGCTGTGGCAAATGTGGCAGCCGCTGGGGACTCGAAGGTGGCCAGCTGTAGGGCGTGCAGCTTGCAGTTCTCGACGCGGGCGAACGCGCGACGTCACGAGCGGAATCTGCATCCGAATCTGTTTCAACTGTCGACAGACTCGCCGAACAATACGCCGATAACGAAGCCAACGCCAGCGTTGGCCGCGGCGCTGGAAATACAGCGTGccgcagcggcggcagcggcaacagcggaGGCGACAAAGGCGGCAGCCGGTGGCAATATATCGACACAGAAGTACCGACAGGTGGTGATGAATACGTTCATCAAGTGCGAGAACGGGGGTTACGACTACGAGAATCCCGAACAGTATCAGATGCTGTTGACGCGCGACAAGATCGAGTTCATACAGGAGAACAATGAGTTTCTGGAGCAATACCAGACGATGACGTGTCGCTGTTGCAACAAGTACTTCAACACCTACAAGAACTTTATGGCGCACGTGCGCAAGAAGTATCCGTTGCTGCCGCGCAATCTCTGCTTCAACTGCCTCAAGATGAACGACTCGAAGGCGCTGTTCATCTCGCATCTCAAGAAGCGCAACTGCATTAATCTCTTTAGGGTGCTGCATGCGTTGCGCACCAAACAGTCGTCGGGTGCGCCAACTGAACAGGTTTCCCTCTCGGTGGAAGCGACGTCGGTTGCATCGGTGGCATCTGTGGCATCGGTTGCATCGGCGCCAACAACGCCGCATGACACCTCGTCGTGCTCGGACCGTCCCGAGAAGCTGCGCGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAATGCAAGCTGTGTCCAAAGGGTTTCCGCACCAAGCACGAGTTCCGCACCCACGTCTACGACAAGCATGCGGATGTGCAGCGCAAGGATAACAATTCCATACAGTGCAGCTTCTGCGGTTTGGACTTTGCCGATCCCGTCGACCGACGTCGTCACTACAACAACATGGACTGCATTGTCCGGTTGCGTTGCATGACGTGCGACGCCAAATTGGAGACGCATCAGCGATTTCTCGATCATGTCTATCAGGATCATTTGGGCGTCGCGAGCAGCGACAGTGGCAACGCCGGCAATGGCAACACCAACAGTGGCAACGCCAGTCTCGACCATTCGCCCGGCAAGCGCAGTCTCCTGGGCGCCCTCGGCATTGGCATCAGCCAAGGCTCCGCCAACGAGGAAacgcgcagcagcaacagccacaatcCAAACGTCATCGCCGCTCCGCTTACCTCCACACCCAAGCCGACGGCTGCAGCGATCACGCAAgcaagtgttgctgctgcagcaacagcagcaactactgCCACAGCCAGTGGCAATCGGGATGCGCCCAAGTCACAGTATTTCTCACGCATGCCACAAGTGTGCCCCATCTGCGGACAGCagtacaacaactacaacaatgtGCTGCGCCACATGGAGTCAAAGCATCCCAACAAACTACCCGAGACGTACAAGTGTGTACGTTGCGGTTTGGGTTATCCTCGGATCTCCTACCTGCGAGAGCACATGATCAATGTGCATGGCGTTGATAAGAATCGACAGTCCGGCGGCTTCGAGTACATTGTGAATGCGGATGCCGTCAAATTGGCGGATGGCAGCACACCCAATGTCTATACCGGACGTTACGATTATGTGATGAAGGATTTAATGTCCATAACAAATGGTGGGACACTCGATGACGATGAGGACGAGCCGGCATGCAGTGTGGCCAAGAAGATGCGACTCGAcgatagcagcaacaacagcagcattaACACCAGCATTGCCAATCAGCAAAAGGAATGCCCCATTTGCAATGCGGTGTTCAGCAACAATATCGGTCTATCGAATCACATGCGATCCCATTACACGGCATCCTCCTCGGCAGCGACCAGTGCAGCTCTGGCGGCTGCCAATCGCATGACGCCCAAGTCGCTGACAATAACACCGTTGGATGCCGGGGCAAATGCCTCGTCGaccggcagcagcaacagcagcagcagcaacagcagcaccacaACCATAACGGTAACACCAGCCACAGCAAAGACAACAACCGCATCGACCGATCATAGagatgcagcagcagaagatgTTCCATCGTCGGGACCATCAATTGGGATCGGCGGTTTACCGCCAGCTATGGCCAATCAGACACCACAGGAGCAGGCGGTGTTCCGTCGTAGCTTGGATCAGGCGGCGGACCGTCGATTCCGGCGGATGCGTTGCCGTATCTGTCAGCGTCGTTTCAGTTCCAAGAAGTCGTATCGCTATCACATGCTTACCGATCATCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTGTGCAATGCAGAGTTTGCCTACGAGAAGGGTCTCAAAGTGCATCTGTTCAAGGTGCACGGACGTGCCATCAAGGACGAAATGATTGTCAAGCAGTTCGAGTGCGATGTATGCTCCATTGTCTACAGTTCAGAGATGGAGCTGCATCAGCATAAGCGCAGTGTCCACAAATCCCAtccggcaacagcagcacccACATCCGCATCGACAAACGCCATGAAGTCATCAACTCTCAAGTCCCCTACGATGGCAAACGTCGAACTCTCTGATCTCTCCAGCACATCACCTCTGTACTGGTATCAGTGCAAGTACTGTCCATCCAATTTTAATACGAACAAGAAGCTAGCCATTCACATCAATTCGCACGATGAGTTCGATTCGAAGGATTATTCGTGCAAGGACTGTGGCAATGTCTACAGCGGACGAAAGAGTCTATGGGTGCATCGGTATAAGAAGCATCCGCAGGTGCCGGATCCGGCCGAGTGCTCACTCTGTTGCAAGATGTTCTTCGACCGCCAGATGCTAGACAATCATACGCCCACCTGCAACCGCAAGCCCATCACGGCCACAGGGGCGCATcagcaggagctgcagcaaCCGCCGCCGTTGCAACGCGGCGTCTTTAAGCACAAGAcgggcgacgacgacgacgatttGGATGACGACTTGGATGACAATCAGTTGCTGGACGATGtcgatgcagcagcagcagcagcaggtgcgactgcaactgttgctgctgttggcagtGATAGCAATGGTGGGGGCATCAACAGCAATACCCATACCATTAGCACCAGTTCGCTGAAGATACGCATACCGGAGGTCGCGTGCACCATCTGTGGGGCACGCTTCACCGACCAGGAGATGTTCAGCAAGCACATACAGAAGCACGAACAGGAGCTCTATGTCGACAATCCGCTGGCCGCCATGTTCGATGACGGTCCTGCCGACGCCGGACAGTTCCAGGTGGAGCGTCAGAACGAGAACGGGGAATACGCGTGCGATCTGTGCGCCAAGACGTTCCCCCAGGTGATAGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCATCGACGGCGAAGCGACAATGctgaacaacagcagcagcaacagcaacaacaacaactcgatGTTGCATCTGCGCGAACTGCATGCGGTGGGTCTGATGCCCAATCAGCAGCatcagaagcagcaacagttgcagctgcaacagcaacagcagcagcagcagcgcaacaacaacaacaacagcatcaacagcaaccTGAGCAACCTGAGCAAcatgagcaacagcaacaggagcaACCGAAGCAAATCGATGAAGCGGAAACGTGAACTGAAGTGCGAATATTGCGCATCCACGttcatcagcaacaacaatctgcGGCGCCACATGTACGAGTTGCACAAACACGAGGTCTCCAACCTTCCCGAACCGCCCGTTATCGAGGTGGACGAACCTTTAAGCTGCCGTCGCTGCGACCTTCGCTTCGCAACCAAGGAGCTCTGGATCGAACACAAGCTGGCGGATGCCAAGGTGGTGCGACCCTTCTGCCCCTTCCAGTGGGGCTGCGACCTTTGCGGGGAGTACCTCTCCCGCAAGGAGAAGCTCATCAATCACATCAACAACCATCTCAAGGAGGACCTGATTGTACCGGTTCTAGCCAagtcgacaacaacaacagcagcagcagcagcaacaacaacaacaacaggagcAGCACACCACAAGACGGTtgcaacaacatcatcaacaacaacaacaacagcagcaacagcagccgcagcagcagcggcagcaacaacaaaggccaaaatagcagcagcaacggcagttgcagcagcagcagcagcagcagcaaccaagAGCAAAGCAAAGAAGGAGGGGGAAGCGGAGGAGGATAAGATTGATAAGATGGATAAGATTGGCAAGCCGTTGGTGAAGCGGGCGGATGAAAgcgatatcgataacaatagcgatagcgataacgcagaagagcagagcagcacggccgatgacgacgatgaggAGGGTGAGGAGGaagacgacgatgatgatgaggatgatgacgatgacgatgacgacgacgatgatgacgacgatgacgatgacgacgatgaggatgaggatgagcaCGAGCATGAGAATGCTGCTAATGATGATGAGCATCATGAGCACAACAATCGCAATGCtgtcgatgacgatgacgatgacgatatCATCGAGGAGGTTATCGAGGACGATGACATTGTCGTGGAGCTGGACGACGAGGAGAGCGATAAGCAGACGCGTCGCCTCAACTTTGCCAAGCTCAATGGCAAGCCAAAGGTCAAGAGCATACACAACTCTGAGGAGGAGaatgataacgataacgataacgatgcagaggcagtcgcagtcgcagagAGTGAGGTCATGACAATTGATGATATTATTGAGGAAGATGATGGCGAAGATGAGgaggacgatgatgatgatgatgatgaggtgGTTGATGTAAATGTGAATGCACATGTTGTGGCCGATGACGATATTGAGGAGgacgatgatgacgacgacgatgatggggacgacgatgatgatgatgatgatgatgatgatgatgaggacgatgatgatgatgacacAGACGATGATGATAATGGCAGAGAGGGAAACAACGCCAACActaatgctgatgatgatgatgtagACGATGTTGATGATGTGATGCAacatcatgatgatgatgatgatgaagacgatgcgcaggcgcagcagcagcatcagagCAATCTCAGCAATGGTGAGGCCATGGAGGTGGATGCCGAtgttgatgatgctgatgttggCATCgattcatcatcatcatcatcatcatcgtcatcgtcatcaacATCAAGCGGCGAGCGGCCACAATTTCAGATTGagtag
Protein Sequence
MVACLCRCLCLCLCSLACAPGNDNINYVGVVFVVVVVVIVVVGVGMLPLRVLGWRWPQLWAALWFRFGSISCPHVLELCAVTNCDLAAITSLDRLSLHICHACISYLNSWQSFKNRCLSAQSKQRQWLEADRSKQQTLLGYLDLNRAENGNVALTEQQQQQQQQQQQQQQQQQQQQQSELKSEAAKAAEKVSANILDGIPSLKKRKSLTVYVSPKQQLQQQLQQQQQQQQQQQQSVRTTSAAAETKQTLHNLLLQVPSATTTAMQQQQHRKYHQQQQQQQQRVGRQQHQLHQQQHQHHQHQHQHHHHHHQQQQQQHQPHRHQRRKRQQQQQPAIAAATATATAAATAAAVQRMAKFKPKLYLPLDIAVPPLPPLPLPQLPATATVTAATVAAAAAAVVNTATVAAAADSLPLPLSLPIDFSQNSTPNLNPISNANPIRNPTPNPIPNPRFSSVLQPPPPPPLPLPLALLPPLAQPPVATLTSNSNATAAAAAVATVATPLLMPPLPALPIKDEPLDDTDDDFQMKCNDESDDMMDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAVVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYENPEQYQMLLTRDKIEFIQENNEFLEQYQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLFRVLHALRTKQSSGAPTEQVSLSVEATSVASVASVASVASAPTTPHDTSSCSDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGVASSDSGNAGNGNTNSGNASLDHSPGKRSLLGALGIGISQGSANEETRSSNSHNPNVIAAPLTSTPKPTAAAITQASVAAAATAATTATASGNRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRQSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDEDEPACSVAKKMRLDDSSNNSSINTSIANQQKECPICNAVFSNNIGLSNHMRSHYTASSSAATSAALAAANRMTPKSLTITPLDAGANASSTGSSNSSSSNSSTTTITVTPATAKTTTASTDHRDAAAEDVPSSGPSIGIGGLPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSIVYSSEMELHQHKRSVHKSHPATAAPTSASTNAMKSSTLKSPTMANVELSDLSSTSPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSKDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCCKMFFDRQMLDNHTPTCNRKPITATGAHQQELQQPPPLQRGVFKHKTGDDDDDLDDDLDDNQLLDDVDAAAAAAGATATVAAVGSDSNGGGINSNTHTISTSSLKIRIPEVACTICGARFTDQEMFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIIDGEATMLNNSSSNSNNNNSMLHLRELHAVGLMPNQQHQKQQQLQLQQQQQQQQRNNNNNSINSNLSNLSNMSNSNRSNRSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLSCRRCDLRFATKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDLIVPVLAKSTTTTAAAAATTTTTGAAHHKTVATTSSTTTTTAATAAAAAAAATTKAKIAAATAVAAAAAAAATKSKAKKEGEAEEDKIDKMDKIGKPLVKRADESDIDNNSDSDNAEEQSSTADDDDEEGEEEDDDDDEDDDDDDDDDDDDDDDDDDDEDEDEHEHENAANDDEHHEHNNRNAVDDDDDDDIIEEVIEDDDIVVELDDEESDKQTRRLNFAKLNGKPKVKSIHNSEEENDNDNDNDAEAVAVAESEVMTIDDIIEEDDGEDEEDDDDDDDEVVDVNVNAHVVADDDIEEDDDDDDDDGDDDDDDDDDDDDEDDDDDDTDDDDNGREGNNANTNADDDDVDDVDDVMQHHDDDDDEDDAQAQQQHQSNLSNGEAMEVDADVDDADVGIDSSSSSSSSSSSSTSSGERPQFQIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-