Hgut002097.1
Basic Information
- Insect
- Hypselothyrea guttata
- Gene Symbol
- -
- Assembly
- GCA_035045125.1
- Location
- JAWNNJ010000415.1:52737-54442[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.3e-15 7.2e-12 44.9 0.0 2 43 348 389 347 391 0.93 2 3 0.049 82 3.1 0.0 28 37 421 430 416 435 0.89 3 3 1.2e-20 2e-17 62.7 0.0 2 42 457 497 456 499 0.96
Sequence Information
- Coding Sequence
- ATGcagagcagcaacCAGAGCTGCGAGGTGCTGCTGGTGGCCAAGGACGGGATTAGCGTGCGGGCGCATCTCTTTGtgctgagcagctgcagcgatcTGATGCGGAATCTGCTGGTGGATCTGCCCGTGGGGCAGGAGGCGACGGTGATGCTGCCAGACATACGGGGCGAGCTGCTGGAGGCGATGCTGTCTTTTATTTACCTGGGCGAGACCAGTTTGTCCTCCGCGCTGCTGTCCGAGTTCCTGGAGGCCATCAGCCTGATGGGCATTAAGTCGGCTATCAGCTTCGAAACAAATCCCACAGCGCTGAGCGGCGCCAATCTTGTCAGCGATGCCATGGCCGTGGAGGCGGCCAAATCCATCAGTGGGCTGCACATTGCCACCACGTCGCTgctgcaggagcaggagcagcaggtgGACGCCAGTGTGCAGCTGCCGAATgcggtgcagcagcagcagcagcagcaggaggaaaACCGAGCGCTGGAGTTTCTCGATGTGTACGGGGAGCAGCCAAAGATCACGTACTCCATTGAGCCCATGGGCGGAGCCGCCAATGGCAATCAGTTTATACTCACAGAGAGCACGGCTGCCTACACCATCACACAGGCGGCGCCCGCGCTGACCAAACTGGGCGCCGCCAGCGTGCCtacggaggaggaggagcctGTGGAGGAGCCTGCCATGGGCGAAGAGGATGCAGAAGCCGAGCTTAGCGATGAACACGAGGAGTCGGAGTCGCAGCTCATCGAGGAGGAGTATGTCGCCTCCAGCGGCCCGCTTATCGAGCTGACGAACGAGGCGGAGGCAGAGGATGTGGCGGACGATGAGCTGCATGAGGAGGACATggccgaggaggaggaggacgacgatgaggatgaggagtTCATCGATGTGAAGCCACGCAAATCCCAGCTGGACATCAAGCTGATCAAAACAAAGGTGCGTTCCCGATCTCCCACCGCCAAGGCCTCCAAGAAGACCATGACGAAGCAGCATCAGCAATACGCCGCCCTCAAGAAGGAGATCAAGGAGGATCTGAATGATGCACTCGATCTGGCAGCCGACGCGGTGCTCCATGAGGGCATCAGCCTGCAGAAGGCCGCGGATCGCTTTGACATATCCAAAACCGTTTTGTGGCGTCGCGTGCGCTCCAATCCCGCCTACTTGACCAAGAAGCGCGAGAAACCCTCCCTCTCCGAAGCCTACGAGCGCCTGAAGAAAGGGGATTCCCTCAAGAACATCAGCCAGGAACTGCACATACCCATGTCCACGCTGCACAGGCACAAGGTGAGGCTGGCGGCCCAGGGGCGTCTGCCGGAGTTCGTCGCCTGCCGACGCAGGGACAGCACACCGAAGGACGAGCTGCGGGACAAGCTGGCGAAGGCGGTGCACGCCTGCCTCAACGGGGGCATGTCCCAGAACCATGCCGCCAATCTCTTCAACATACCCAAGAGCACGCTCTGGCGGCACCTCCAAAGAAGGGTCTCTGAGGCGGAGCGCAAGGtcaaggaggagcaggaggaggaggacgaaGAGGATGCTCttaattaa
- Protein Sequence
- MQSSNQSCEVLLVAKDGISVRAHLFVLSSCSDLMRNLLVDLPVGQEATVMLPDIRGELLEAMLSFIYLGETSLSSALLSEFLEAISLMGIKSAISFETNPTALSGANLVSDAMAVEAAKSISGLHIATTSLLQEQEQQVDASVQLPNAVQQQQQQQEENRALEFLDVYGEQPKITYSIEPMGGAANGNQFILTESTAAYTITQAAPALTKLGAASVPTEEEEPVEEPAMGEEDAEAELSDEHEESESQLIEEEYVASSGPLIELTNEAEAEDVADDELHEEDMAEEEEDDDEDEEFIDVKPRKSQLDIKLIKTKVRSRSPTAKASKKTMTKQHQQYAALKKEIKEDLNDALDLAADAVLHEGISLQKAADRFDISKTVLWRRVRSNPAYLTKKREKPSLSEAYERLKKGDSLKNISQELHIPMSTLHRHKVRLAAQGRLPEFVACRRRDSTPKDELRDKLAKAVHACLNGGMSQNHAANLFNIPKSTLWRHLQRRVSEAERKVKEEQEEEDEEDALN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00832280;
- 90% Identity
- iTF_00832280;
- 80% Identity
- iTF_00832280;