Basic Information

Gene Symbol
ct
Assembly
GCA_035045125.1
Location
JAWNNJ010000194.1:2715279-2720912[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.7e-32 2.9e-28 97.7 0.0 3 77 432 507 430 509 0.96
2 3 2.2 1.3e+04 -3.7 0.5 11 27 559 575 546 584 0.60
3 3 2.9e-31 1.8e-27 95.2 0.0 3 76 704 778 702 781 0.96

Sequence Information

Coding Sequence
ATGAGCAACCACAGCTTTTCCAGCTTCCCAGCTTCCCTGCTGCAGTCCTGTCCCATCCCGTTCTTCCGACCTCCCACACTTTTCTGGCATTTTCCCTTTGATTCTGGACTGCCACAGTACGCGGGTCGCGGCACTGGCGGCGATGATTCGATGTCTGAGGATCGCCTGGCGCACATACTCAACGAGGCGTCATCCCTGATGAAGAACAATGCGGCAGCTgccgcacagcagcagcaggagcatcAGCGCCGTCATGCCACAGACGATACGCACAGCAACGAGGACAGCAAGTCGCCACCGCAAAGCTGCAGCCCCACCTTCTACAAGGTGGAGCACCAactcaagcagcagcagcaacaacaacagcagctccaCGCCTCCGAGCACGCGCAGCGCGAGCAGCGcgaggcggcggcagcggcagcggctgttgcggtgcatcagcagcagcagcagcagcaacgcgaGCAGCGCGAGCAGCGGGAGGCCGTGCAgcgcgagcagcagcagcggctgcggcACGAGGATCTGGCGCAGGACAAAATGGCGCGTCTCTATCAGGAGCTAATGGCGCGCACGCCACGCGAGGCTGCCTTTCCAAGCTTTCTGTTCTCGCCGCTGTTTGGAGGCGCCGCGGGCATTCCGGGAGCAGCGGGAAATCCCTTCCCAGGCGCGATGGCGCCCGATGAGAACATGCGTCATGCGATCGAGCGGGAGATCgccaagctgcagcagcagcatcagcagcagacgcaggcGGCCAACTTCAGCAACTTTTCCAGTCTGATGGCGCTACAGCAGCAGGTGCTGAACGGTGCTCAGGATCTGTCGCTGGCCGGCAAGGACATCAAGCTGAACGGACAGCGCACCGGCTTGGAGCagcacagcggcagcaacagctccaAGGATGGCGAGCGTGGCGACGATGAGCGCAGCTTTCCCAGCCTGCCGCATGTGCGCAAATCGGAGGGTGGCAATACGCCAGCACCCTCTGCACCGCAGCCAGCGCTACCGGCCCCGCCCAGCGGCGCAGCGAACGCGGGCGCTGGAGGCGGCATTGGGAGTGGCAGCCATGGCAGCAATTCGGCCGCTCCGAGTCCATTGAGCAACTCGATACTGCCGCCGGCATTGAACAGCCAGGGCGAGGAGTTTGCGGCAAGTCCGCTGCAGCGCATGGCATCGATAACCAATTCGCTGATCACGCAGCCACCGGTGACGCCGCACCACTCGCAACCGCAGCGACCCACCAAGGCGGTGCTGCCACCGATCACGCAGCAGCAGTTCGATATGTTCAACAATCTCAACACCGAGGACATTGTGCGACGCGTCAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGACTGTTTGGCGAATCGGTTTTGGGTCTGTCCCAGGGCTCCGTCTCCGATCTGCTGGCACGCCCCAAGCCCTGGCACATGCTGACGCAGAAGGGCCGCGAGCCGTTCATACGCATGAAGATGTTTCTGGAGGATGAGAATGCGGTGCACAAACTGGTCGCCAGCCAGTACAAGATAGCGCCCGAGAAGCTGATGCGCACCGGCAGCTACAGCGGTAGTCCGCAGATGCCACAGGGCCTGGCCAACAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGAGCTGAAGCTGCAGGAGCCGGCACAGGCGCAGCACATCATGCAGCAGATGCAGGCGGCGGcgatgttgcagcaacagcaagccGCGCAGGCCGCTGCCGTGCAGCAAGCgcaggcgcaggcgcagcagagccaacagcagcaggcagcgcagcagcagcaacaccagcagcagcaggcggcgcagcagcagcaggcagcgcagcagcaggcggcgcagcagcaggcggcacAGCTGTTGCATCATCAGAATATGCTGCTCACCTCGCCAGGCCTGCCGCCGCAGCATGCGATCAGCCTGCCGGCGGCCAATACGCCCAATGCGCCTGGGGGCGTGCCAGGCGCCGTGACGCCCGTGAGCGGGGAGAAGAAGCCGATGCTGATGCCGGTGCATGGGGCAAATGCGATGCGCAGCCTGCATCAGCATATGTCGCCGACGGTGTACGAGATGGCAGCGTTGACGCAGGATCTGGACACGCACGATATTACGACCAAGATCAAGGAGGCGCTGCTGGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTGGGGCTGTCGCAGGGCTCCGTGTCGGAGCTGCTGAGCAAGCCGAAGCCCTGGCACATGCTGTCCATCAAGGGACGCGAGCCGTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAACGTGgagcggctgcagctgctgaagaACGAGCGCAGGGAGGCGAGCAAGCGACGTAGGAGCACCGGACCCAATCAGCAggacaacagcagcgacaCGTCCAGCAACGATACCAATGACTTCTATACGAGCAGCCCGGGTCCGGGCTCCGTTGGCTCCTCGGTCAGCGGCGCACCGCCCAGCAAGAAGCAGCGCGTGCTGTTCTCCGaggagcagaaggaggcgcTGCGTCTGGCGTTTGCGCTGGATCCGTATCCGAATGTGGGCACCATTGAGTTTCTGGCCAATGAGCTGAATTTGGCCACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGGCTTAAGCAGCAGGTGCCGCACGGCCAGCCCGGCCAGGATAATCCCATACCGAGTCGGGAGAACACCAATGCCACGCCCTTCGATCCCGTCCAGTTTCGCAtactgctgcagcagcgtctCGTCGAGCTGCACAAGGAGCGCATGGGTTTGAGCGGCACACCCATACCCTATCCGCCGTACTTTGCCGCCGCCGCGCTGCTCGCCGGACGCAGCTTGGCCGGCATTCCGGGCGCGGCGGCCGCGGCGGGCGCAgcggctgccgctgccgccgctgtcGGCGCTGCCGGCGGCGATGAGCTGCAGGCACTGAATCAGGCGTTCAAGGAGCAGATGAGCGGTCTGGATCTATCAATGCCAACGCTGAAGCGTGAGCGCAGCGATGATTATCAGGacgagctggagctggacgCCAGCGGCCACAACATGAGCGATAACGAGTCCATCGATGGCGGTCACGAGCCGGCCGAGCATAATCTGCTCTCCGATTATAAATCGGCGCTCGCCTcggccgccgccgctgccgcgtACATGAGCAACGCGGTGCGCAGCTCACGCCGCAAGCCCGCCGCCCCGCAGTGGGTCAATCCGGCTGGcgccagcaccaccagcagcagcagtggtgccgccgccgccgctgccaacGCCGCCAGCGACAGCGAACGCATCATCAACGGCGTCTGCGTCATGCAGGCCTCCGACTATGGACGCGATGACAACGACAGCGTCAAGGGCGGCGACGCCGACGCGCAGCAGGATGAGCACGCGCAGCTGGAGATCGATCAGCGTTTTATGGAGCCCGAGGTGCACATCAAGCAGGAGgaggacgacgacgaggacgaacaacaacagcagcagcagccgtccGAGCAACagagcgtcggcgtcggcgttgaCGCCGATGCGCTGGACAAGCTGAAGGCGTTGCATGAGGAGAAGCTGCGGCTGGTGCGCGTGCGGCGTCTCAGCGGCAGCAACGGCGAGGCCGAGGAGCTTGCCAcagcgcaggcagcgacgccagctgcgacgccagcagcggcagcggcagcagcagcgacagcgacgccaaCTGCAGCCACGTGGAACTATTAA
Protein Sequence
MSNHSFSSFPASLLQSCPIPFFRPPTLFWHFPFDSGLPQYAGRGTGGDDSMSEDRLAHILNEASSLMKNNAAAAAQQQQEHQRRHATDDTHSNEDSKSPPQSCSPTFYKVEHQLKQQQQQQQQLHASEHAQREQREAAAAAAAVAVHQQQQQQQREQREQREAVQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLFSPLFGGAAGIPGAAGNPFPGAMAPDENMRHAIEREIAKLQQQHQQQTQAANFSNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRTGLEQHSGSNSSKDGERGDDERSFPSLPHVRKSEGGNTPAPSAPQPALPAPPSGAANAGAGGGIGSGSHGSNSAAPSPLSNSILPPALNSQGEEFAASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAMLQQQQAAQAAAVQQAQAQAQQSQQQQAAQQQQHQQQQAAQQQQAAQQQAAQQQAAQLLHHQNMLLTSPGLPPQHAISLPAANTPNAPGGVPGAVTPVSGEKKPMLMPVHGANAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELNLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGTPIPYPPYFAAAALLAGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIDGGHEPAEHNLLSDYKSALASAAAAAAYMSNAVRSSRRKPAAPQWVNPAGASTTSSSSGAAAAAANAASDSERIINGVCVMQASDYGRDDNDSVKGGDADAQQDEHAQLEIDQRFMEPEVHIKQEEDDDEDEQQQQQQPSEQQSVGVGVDADALDKLKALHEEKLRLVRVRRLSGSNGEAEELATAQAATPAATPAAAAAAAATATPTAATWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00832048;
90% Identity
iTF_00832048;
80% Identity
iTF_00832048;