Hgut005709.1
Basic Information
- Insect
- Hypselothyrea guttata
- Gene Symbol
- retn
- Assembly
- GCA_035045125.1
- Location
- JAWNNJ010001141.1:258223-281004[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-26 9.1e-23 80.5 0.0 2 89 277 362 276 362 0.96 2 2 1.2 2e+03 -0.7 0.6 26 69 464 512 449 560 0.63
Sequence Information
- Coding Sequence
- ATGCGCCAATATGTGCAATCTTTTAGCCAACAAAGCCCCAGCtCGCATGGCGATCGCACCGACGACGAGATGCGAGATTGTGACTCCGTCGATGGGGAGCATCATCAGCTGAGCGCCAAGGCAGCGATCGCAGCTCGTCTCAGCCACACAGTAGCCGGCGGCGTTGGCCTCAACTTTGCCAGTCCCGAGCAGCAAACAGATCTGCCTCTCAGCCATCACCATCAGCTGCCGCCCAATCATCCGCTCAACGCCCTCGGCAGCTTCATGAGCATCGGCGGCCTTCACAGCATTCCAAATCTGCAGCACAGCGACGTCCTGGAGAAGCTCAAGATGCAGGTGCGAGACATGAAAGTGGGTCTCATGGATCAGGACTATGCAGCGGCGGCCCATGCGGCGGCCTTTGGTGTCAACATGCTGCCCACCACGATGAGCTCGGCCTTTCCGCTGCCCCACAATTCGGTGGCagccgcagcggcagctgccacattTGGCGGCCCCGTGCCCACAGCCAGCAATGGCGCCAGCTACAATGGAGgcgccgcagcagctgctgtcaaTAATGGAGCAACAGGtggagcaggaggagctgcagcaggagcagcagctgcagcaggtggcaacgccaatgccaacagcaacaacaacaataatgggCATCCCTTTTCCTTTGCCTCACCAACAGCGCCCAGCGCCAAAGAAGCTAATTCCGCGTCAAATTCATCGACATCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGATCCCAAGCGCAAGGAGTTTCTGGatgatttattttcatttatgcaAAAGCGCGGCACACCCATCAATCGCCTGCCGATCATGGCCAAATCGGTGCTGGATCTCTATGAGCTGTATAATTTGGTCATAGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAATTGTGGCAGGAGATCATCAAAGGGCTGCATCTGCCCTCGAGCATCACCAGCGCTGCCTTCACGCTGCGCACTCAATACATGAAGTATCTGTATCCCTACGAATGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCAGCCATCGATGGCAATCGGCGCGAAGGACGACGCTCCAGCTACGGCCAATACGAGGCGATGCACAATCAGATGCCACTGACGCCCATTTCACGCCCCTCGCTGCCCGCGGGCATTCAGCAAATGTCCCCCCTGGCCCTCGTCAcccacgccgccgccgccaacAATCAGCAGGCGCAggcagcagccgccgccgccgcagcGCATCGCCGCCTTATGGGCGGGCCGGCGTTTGGGCAGATGCCGAATCTGGTCACACAGGAGATCGAGAACCGGATGATGGAGTATCTGCAGCTGATACAAGCCAAGAAGGAGCAGCAGGGCGCAACCGTGCACAcacaccagcagcaacaacaacagcagcaacaacaacaacagcaacaatcgctgcatctgcatcagcagcagcagcagcaacaacagcagcagcagcaacagcaacgccaACGCTCCCAGAGTCCAGAGCTGAGCACTCGGGACGCGCTCAGCGCTCAGGTGGCGCTCTGGCACATGTACCACAACAGCAGTCCCACAGGCTCCGCCCACACCTCCCCCCAGCAGCGCGAAGCCCTGAACCTGTCGGATTCGCCGCCAAACCTGAACTTGAGCCACATCAAGCGGGAACGCGAACGCGAGCCCACACCCGAGCCCGTGGATCATGAGGATGCAGTTCACCAGCCGCCGCCCGCTAAGCGTGTGGGCAGCGGCCTCATGCCCCCCGGCTTCCCCGCCAACTTCTACTTGAATCCACACAATATGGCAGCGGTGGCCGCTGCCGCCGGCTTCCATCATCAGGCGAACAGCAGTtcgcatcatcatcagcatcatctgcagcatcaacagcagcagcaggatgcCGCCTCGGAGGGGGAGGCGGATGAGGATTACGGCAATGCGGAGCACAATACCACCGGCAACTCATCGTCCACCCACGATGAGCACGAACCACAGCAGCTGAACGgacaccatcatcatcatcatcatcatcatcagctgcaCGAGCACGACtcgcatcatcatcaccacTCGCAACACCATCAGAATCACCTGGACAAGTCCGATGATTCAGCCATCGAGAACTCGCCCAGCACATCCACCACGGCCTCCGCCTCCGGCGGCAACCGCCACAGTTCACCCGTATCCACCAAAAAGAAGGCGGCCAACTCCAACAACAAGGCCCAGACCAATTCCAAGGACACGCAGCACCACAACGAGGCGGCAGGGGCGGCGGCTGCCAAGCTGCATCCCCTCGAGACCCTCAGCCTGCTCTCCGGCATGCAGTTCCAAGTGGCACGCAACGGCACTGGAGCAAATggggagcagcagctgctggtcaATCTGCAGCTGAACGGCGTCAAGTACTCGGGCATGTTGGTGGCCAATGGGCAGGGGGAGCGACGGAGGACGGAGCTGGAGGGCAGCACGGCGAAGCTAGCGAAGGAGCAGCCCGAGAAGCAGAAGGAGCagaaagagcagcagcagctagagcaggagcagcagcagcagcaacagccggaGGAGGatgagcaggaggaggaggaggaagtgGAGGAGCAGCAGTCGGAGGCTGGAAAGCGAGAGCATTGTGCAGCTGAGGGCAAGGGGGAGCAGGGCGTGGAGCTGGCAGAGGAGGATATTGTGCATGCAGCGAGTGGCGGCATTATGGGCGTGGCGGGCGCTGGCAACGGGCCGGTGGGCGTGGTGCCCATGCTTAAGGATGCGGTGGTCAGCTCCTAA
- Protein Sequence
- MRQYVQSFSQQSPSSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGVGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMSIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMDQDYAAAAHAAAFGVNMLPTTMSSAFPLPHNSVAAAAAAATFGGPVPTASNGASYNGGAAAAAVNNGATGGAGGAAAGAAAAAGGNANANSNNNNNGHPFSFASPTAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPAGIQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQGATVHTHQQQQQQQQQQQQQQSLHLHQQQQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKREREREPTPEPVDHEDAVHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSSSHHHQHHLQHQQQQQDAASEGEADEDYGNAEHNTTGNSSSTHDEHEPQQLNGHHHHHHHHHQLHEHDSHHHHHSQHHQNHLDKSDDSAIENSPSTSTTASASGGNRHSSPVSTKKKAANSNNKAQTNSKDTQHHNEAAGAAAAKLHPLETLSLLSGMQFQVARNGTGANGEQQLLVNLQLNGVKYSGMLVANGQGERRRTELEGSTAKLAKEQPEKQKEQKEQQQLEQEQQQQQQPEEDEQEEEEEVEEQQSEAGKREHCAAEGKGEQGVELAEEDIVHAASGGIMGVAGAGNGPVGVVPMLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -