Basic Information

Gene Symbol
grh
Assembly
GCA_035045125.1
Location
JAWNNJ010000171.1:50677-93394[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.063 5.8e+02 -0.4 1.7 55 116 691 762 645 796 0.55
2 4 0.35 3.2e+03 -2.8 1.9 6 36 883 912 879 916 0.54
3 4 0.37 3.4e+03 -2.9 1.6 91 111 1007 1027 975 1040 0.46
4 4 4.9e-63 4.5e-59 199.5 0.6 24 221 1155 1347 1141 1349 0.93

Sequence Information

Coding Sequence
ATGTCCACATCCACCGCGACAACCAGCGTCATCACGTCCAACGAGCTTTCGCTGTCCGCTGTCCACGGCCATCATCAGCACGGCCATCAccatcacacacacaacacccACAACACCCACAATACTCACAACACCcacaacacgcacacactgcatcaacacacacacaacacacacaatcgGCTGGGTGTGCCGGGCGGGGGGCATCTGAGCGACGCCTCACTCTCCCCCATCCAGCAGGGCGCCAACATcgtggccagcagcagcaacagctctcCTTTGGGCCATAACGGAGTACCGCTGCTGACCACGATGCATCGCTCTCCGGACAGTCCGCAGCCGGAGCTGGCGACCATGACGAATGTGAATGTGCTGGATCTGCATACGGACTCATCGAAGCTCTACGAGAAGGAGGCGGTGTTCATCTATGAGACGCCCAAGGTGGTGATGCCGCCGGATGGCAGTGGCgggggcggcggcggtggcggcaatggcaatggcagtgGCGGACCCGGCTCCAATGGCGGCCATGACGATGGTCAAGTGATAGACGCCAGAATCGCAGCACAGCTGAGCAATCAACATTTGGCCGCCCAGCCGCAGCAGACGGAGCATCAGCCGCTGGCCAAGATCGAATTCGATGAGAATCAGATCATACGCGTGGTGGGTCCCAAtggggagcagcagcagatcatCTCGCGCGAGATCATCAATGGGGAACATCACATTCTGTCCCGGAATGAGGCTGGTGAGCACATACTCACGCGCATCGTTAGCGATCCGTCGAAGCTGATGCCGAATGATAATGCCGTGGCCACCGCCATGTACAATCAGGCCCAGAAAATGAACAACGAACATCAGGGTGTCTATCAGACGTCGCCCCTGCCCCTGGACGCCTCGGTGCTGCATTATGGCAACGATAATGTGATCAAGACGGAGGCCGAGATCTATGAGGATCACAAGAAGCACGCAGCTGCGGGTGGTGCAGTTAGTGGTGCTGGTGCTGGCGGTGGTTCCATTATCTACACCACCACCGATCCCAATGGTGTTAACGTCAATGTCAAACAGTTGCCACATCTGGCGGCCGTGCCACAGAAGCTCGATCCCGAACTCTATCAGACGGACAAGCACATCGATCTGATCTACAACGATGGCAGCAAAACCGTCATCTACTCCACCAGCGATCAAAAGGGCCTGGAGATCTACTCTGGTGGCGATATCGGCAGCCTCGTTTCCGATGGTCAGGTCGTAGTGCAAGCGGGTTTGCCCTATGCCACCACAACCAGCGCGACCGGACAGCCCGTCTACATTGTGGCCGATGTCGAGGAGCATTTACAGGGtgtactggCACTGCCCTCTTCCTACTGCACTAAGCAATACCCGGCAATTCATTTTatcgccatcatcatcatcatcatcatcgtcatcaacGTGTTGCTGCATTTTGCATCCGCAGCTTTGGCCCGGCTCAAGGGGCGCCGGGCGGGGGGTAGGCACGAAGAAGTTTACCTGGCACCggatatttatgcaaatgatgCCAGAACTGCCCAGCCAGAAGCGCAGCGGAAGGGTTGCAAGCGCCTAGAGCCGGACAGCGGCAACAGTGCCATAAGGGAAGAAGGCTCGCTACCGCAGAGCCCGGCCCTCGGTACGGCCCCGGTACTGCCCCGTCGCGGCATCAGCAGCTACGGCTTggagccacagcagcagccacaacagcagctgcaacatgtgGCACACACGCACTACGGCAGCCCATCGCCCGTGCATTACTTCGAGCCAGCCAAGGACGAGGCAACAGCCTTgccacaacaccaacaacatcaacaacaccTGCCACTTACTGCCGCAGGCCTAATGCAATCAGTGGCCAACGAGTTGCAGCAGCCGCcacctgccccgccccccctGCCACCGCCCATGGGCGACTCTAGTCACGCCAACGACATGCCGCTCTCCCCCGCCGCCAGCTACGCCGTCTACAGCTACTACAGGGATGCGGAGCAGCAGGCAGcgcaacaccagcagcagcagcagcaacatctcgTCTGGAGCGCCGGCAAATTAAATGGACAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaagGCTTTCTGCTCGGTTCCCACCCCTCGTCGTCGGCAGCCACAACCGGCGTGGTgtccacaacaacaatctcaaaccagcaacaacagcagcagcagcagcaacaccagcagcagcagcatcagcagcagcagcagccaccgCATCCCAGCGATATTGTTACCATAACCACAGCGGGTGTGGGGAGTGCGGGCTCCATCGTCTCTGCcgcagtgcagcagcaacagcagcaacagcagcagcagcaacagttgctgagCATCAAACGAGAGCCCGAAGACTTGAGCAAGGATCCCAAGAACGGCAGCATTGGCGCCGCGGCTAACGGTGGCACGGTGATAACGCAGAAGATCTTGCGCGTGGAGGCAGCACAAATCGATAGCGATAACCgtagcgataacgataacgatagcgATTGCGATAACGATAGCGTCGCAACTGCAACCGCAACTAGTCCCGCCAGCAGCCCCACAACAGCCCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCtcacaccagcaacagcagaccaacagcagcagcaacaacagcaaccccaacaacaccagcaacagcaacaacacggTCGCACTGCAAGCACAGAGTCCCAGTCCGGGACCCTACATAACCACGGATGGTTATGGCATGTACACGACCGCCCGCCTGCCGCCCGGACCCCCGCCCACAACGACATTCATAACGGAACCCTACTACAGGGAATACTTCGCGCCGGACGGACAGGGCGGCTACGTGCCAGCGGGCACAGCGCGCAGCATTTATGGCGACGACGTCTCCGTAACGGCAGCTCAGCCCGTCTACGAGGCCCGATTCAGCAGCAATGCGCTAACCACAACCACAGTGCTCACCAGCAGCAATCCACACCATCacagtcagcagcagcagcagcagcaacaacagcagcagcaacatcagcagcaacagcagcaacagtcgcagcATCAGCAGGAATCCGGCAAAAGCGGGGGCACGCCCCTATATGCCAAGGCTATAACGGCAGCGGGTCTGACAGTCGATCTGCCGAGTCCGGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAAAACCACATACAGCAGTCTTTCGACTATACGGAACTCTGTCAGCCGGGCACCTTGATCGATGCCAATGGCAGCATACCCGTCTCCGTCAACAGCATACAACAGCGTACTGTGGTCCATGGCAGTCAGAACAGTCCGACCACATCCCTGGTGGACACCAGCACAAACGGCTCCACACGCTCGAGGCCCTGGCATGATTTTGGTCGGCAAAACGATGCggataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTATAACCTGGAGAGTCCGATCAGCTCGTCGCAGCGTCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTACGGCATAACGCTGGAGTACGTGCACGATGCGGAAAAGCCAATCAAGAATACGACGGTTAAGAGTGTGATCATGCTAATGTTTCGCGAGGAGAAGAGCCCCGAGGACGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTTAAGCAAAGAATCTTGGATGCAGATACGAAGAACTCGGTGGGCCTGGTGGGCTGCATTGAGGAAGTGTCGCATAATGCCATTGCCGTCTATTGGAATCCGCTCGAGAGCTCAGCTAAGATCAACATTGCCGTACAGTGTCTCAGCACGGATTTCAGCAGTCAAAAGGGTGTCAAGGGTCTGCCGTTGCACGTACAAATCGATACGTTTGAGGATCCGCGAGATGCGACGGTCTTCCATCGGGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCTGAGCGCAAGACACGCGATGAGGAGAGACGCGCTGCCAAGCGCAAGATGACGGCCACGGGACGCAAGAAGCTGGACGAGCTCTACCATCCGGTAACAGATCGCAGCGAGTTCTACGGCATGCAGGATTTGGCCAAGCCGCCGGTGCTCTTCTCGCCAGCCGAGGACATGGAAAAGGGCTTCTATGGTCATGAGACTGATTCGCCGGAACTCAAAGGCGCCTCTCCGTTCTTGTTGCACGGCCAGAAggtggccacgcccacgctgAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGATAAGAAGGATCACATATTGGATCAGAGTATGTTAAACAGCACGCCCATGGCCGATTTTGGGCCGCCCATGAAAAGGGGGCGCATGACGCCGCCCACCACGGAGCGTGTCATGCTGTACGTGCGGCAGGAGAACGAGGAGGTGTACACGCCCCTACACGTTGTGCCGCCCACCACCATCGGACTGCTAAATGCGattgaaaacaaatacaaaatctcaacaacgagcataaataacatttatcgCACAAACAAGAAGGGGATTACGGCGAAAATTGATGATGAAATGATATCGTTCTACTGCAATGAGGACATCTTCTTGCTGGAAGTGCAACAAATCGAGGACGACCTGTACGATGTGACGCTCACGGAGCTGCCCAATCAgtag
Protein Sequence
MSTSTATTSVITSNELSLSAVHGHHQHGHHHHTHNTHNTHNTHNTHNTHTLHQHTHNTHNRLGVPGGGHLSDASLSPIQQGANIVASSSNSSPLGHNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDSSKLYEKEAVFIYETPKVVMPPDGSGGGGGGGGNGNGSGGPGSNGGHDDGQVIDARIAAQLSNQHLAAQPQQTEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNEHQGVYQTSPLPLDASVLHYGNDNVIKTEAEIYEDHKKHAAAGGAVSGAGAGGGSIIYTTTDPNGVNVNVKQLPHLAAVPQKLDPELYQTDKHIDLIYNDGSKTVIYSTSDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATTTSATGQPVYIVADVEEHLQGVLALPSSYCTKQYPAIHFIAIIIIIIIVINVLLHFASAALARLKGRRAGGRHEEVYLAPDIYANDARTAQPEAQRKGCKRLEPDSGNSAIREEGSLPQSPALGTAPVLPRRGISSYGLEPQQQPQQQLQHVAHTHYGSPSPVHYFEPAKDEATALPQHQQHQQHLPLTAAGLMQSVANELQQPPPAPPPLPPPMGDSSHANDMPLSPAASYAVYSYYRDAEQQAAQHQQQQQQHLVWSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQQQQQQQQHQQQQHQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQQLLSIKREPEDLSKDPKNGSIGAAANGGTVITQKILRVEAAQIDSDNRSDNDNDSDCDNDSVATATATSPASSPTTALEMYATTGGTQIYLQTSHQQQQTNSSSNNSNPNNTSNSNNTVALQAQSPSPGPYITTDGYGMYTTARLPPGPPPTTTFITEPYYREYFAPDGQGGYVPAGTARSIYGDDVSVTAAQPVYEARFSSNALTTTTVLTSSNPHHHSQQQQQQQQQQQQHQQQQQQQSQHQQESGKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKGFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLNSTPMADFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDEMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-