Hrec018708.1
Basic Information
- Insect
- Hyppa rectilinea
- Gene Symbol
- nfxl1
- Assembly
- GCA_951799385.1
- Location
- OX637316.1:2401843-2404323[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 3.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.011 1.9e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 18 3.1e-07 0.0056 17.6 15.9 3 19 186 202 185 202 0.95 4 18 9.8e-07 0.017 16.1 9.8 3 19 239 255 237 255 0.91 5 18 1.7 3e+04 -3.9 1.9 6 10 280 284 279 284 0.83 6 18 1.6e-09 2.9e-05 24.9 12.5 1 19 290 308 290 308 0.99 7 18 7.9e-06 0.14 13.2 19.3 3 19 345 361 337 361 0.88 8 18 1.2 2.2e+04 -3.4 0.4 7 11 365 369 365 369 0.84 9 18 6.7e-05 1.2 10.2 20.3 1 18 395 412 395 413 0.97 10 18 4.5e-10 8e-06 26.7 14.0 1 19 422 440 422 440 0.99 11 18 0.67 1.2e+04 -2.6 1.7 5 10 448 453 448 459 0.86 12 18 0.0002 3.7 8.6 6.4 9 19 488 498 486 498 0.89 13 18 0.076 1.4e+03 0.4 9.9 1 12 508 518 508 518 0.90 14 18 0.31 5.6e+03 -1.5 3.5 14 18 547 551 547 552 0.87 15 18 0.12 2.2e+03 -0.2 0.5 7 12 567 572 567 579 0.83 16 18 5.3e-06 0.096 13.7 4.8 1 11 588 598 588 599 0.97 17 18 0.00023 4.2 8.5 11.7 4 18 630 645 628 646 0.82 18 18 0.00037 6.7 7.8 10.1 1 16 687 701 687 706 0.86
Sequence Information
- Coding Sequence
- ATGGCGCGCCGATACAGAGACGCGGCTGCAAAAATGCAACAAAACGTCCAGAAACATCTAAAAGATATGAAAGAACTGTCGTCGTCTGAAGATGAGGATCCTTGCGAATCCAATGTCTTGGAAAGTATGTTTCAGAGCTACTGGCGCGGCGGCGGAGATACTCAAATGCTGAATAGAACCAAAAACCTCCTTGAAGAAGCCATAAGCGGCCGTTCTGTTACGTGTCTTATATGCATAggatcaattaaaaaatctcaTGCTATATGGACTTGTGATCATTGTTTTTCGTACTTCCATCTTTCTTGCATTCAAAAATGGGCGAACGATAGTATAAGCTTGCGCAGTGAAGAAAGTACAGGCCCGATAGCTgttataaaacaacaaaaaatcgaATGGTGTTGCCCTAAGTGCCGAAATTCTTACTCTAAGGAAGAAATCCCTCGTAAATATCGCTGCTTCTGCGGCCAAACTGATGATCCACCACACCATCCTTGGCTTATTCCTCATACCTGTGGTGAAGTCTGTGgaaaaaggttgtctactggtGAAAATTGTAAACACAAGTGCTTGCTGCTTTGCCACCCTGGTCCCTGCCCTCCATGCCCACAAACTGTTAATGGCATATGTTTCTGTGAAAAGGAAAATAAGAGAGTGAGATGCAGTGCTGCTAAGTGGTCATGTGGCCAACTTTGTAAGAAAACTCTTCTGTGTAAGACTCATTACTGTGAAAATGTCTGTCATGCAGGTGATTGTACTCAATGTAGCTACACTAGTATTCAGCCGTGTCAATGTAATTCAGAGAAAGCTAAAAGACCATGTAATGATCCAATCTGGCAGTGTAAGAAGCCTTGTAACAAGCTATTTTCCTGTGGGTATCATAAATGTGAGAGAATCTGTCATTCAGGCAACTGTGGAGATTGTCCCAACTCGGGAACTTTATCGTGTCCCTGTGGAGCTAACCAGCGCTTTGTCCAATGTCCAGATGTTATGGAAACCTGCCTAGGTACTTGTGGTAAGAGACACGAAGGTTGTGATCATAAGTGTCCAGAGAAGTGCCACAATGGTAACTGCCCACCTTGCCAAGTTTTAATTGAAAAGAAATGCCACTGCTCCACACATACAAGGGCTTTACCATGTAGCAAGGACTTCAAATGTGATACTAAATGTAGAGGAATTAGGCTATGTGGTAAACATGGTTGTGGAAGAAAATGCTGTAACGGAAACTGTCCCCCATGTGAGAAGATATGTGACAAAGGCCTCCACTGTGGTAGGCATAAATGCACAAATATTTGTCATCGTGGACCATGCTATCCATGCCCGCTAGAATCCAAAGTAACTTGCAGATGTAAAGAAACTTGTATAAGAGTCCCTTGTGGACGGGAAAGGCAGACAAAACCTCCAAAATGCAACTTGCCCtgcaaaattaaatacaaatgtgGTCACAGCGAAGAAAATAAACACTCTTGTCATTTTGGTGACTGTCCACCTTGCAAAGCAATCTGTGATAAGCAGTATCCTAAGTGTAGTCATCATTGTAAAGCGGTTTGCCATGAATATGTTGCAGTGCTGTTCAAACAAGTTGAAAAACCTGCAACTCCTTGGGAGGTACAACCACCAAAGACTAAGATCATGACCTTAGATTGTCCTCCATGTGAAACACCAGTACCAATGGTTTGCTTTGGAGAGCATGAGACGGACCAGCAGCCCTGCCACACAGCTTCACGAAGACCATGTGGAAGAGAGTGTGGCAAACCATTGGGTTGTGGCAATCACAAGTGCTCTTTACTCTGTCATCTTTACAGCCCTGTTCCTGAATACCCAAATGTGCCTTCAACTTGTAAGCAATGTAACAGAGAATGTTCAGTTCAACGCCCTGAAAAATGTGCCCATAAATGTTTTGTTAGGGCCTGTCACCCTGGTCCGTGCCGCCCGTGTGAAATACTTGAGCGTTTAGCCTGCCACTGTGGTGTTACAGAGATATACTTACGCTGTCGAGAATTGTCTACAGCTACAGAAGAGATGTTATCATGCAAGCAACAATGTCCTAAGAACTTAGATTGTGGCCATCGCTGCCGTAAGACATGTCATTCTCGAGCTTGCGGTAACCAAGTATGCATGAAGAAAACTAAAGTACACTGTCCTTGTGGTACTATAAAGAAGGAAGCTCCTTGCAACACAGTTAGAAACGGAGAGAGTAAAATAATGTGTGATAatacatgtgaagctaagaaaGCTGCTGCTAAAATAGAACAAGAGAAAGAGAAACAGAGATTGAGAGAAGTAGAGGAAGAAAAGAATCGTAAAGAATTAGCAGAGTATGAGTGGAAACTAAGTggcaagaagaagaagtacaagGAAAAGAAAATGGTTGTTGGTAAAGATGACCGTGGATTGCTTAAGAAGTATTGGGTACCAATATCATCATTTCTAGTTATGATGCTAGgagctatttattatatatttgatgTAGGATTAGAATAG
- Protein Sequence
- MARRYRDAAAKMQQNVQKHLKDMKELSSSEDEDPCESNVLESMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCDHCFSYFHLSCIQKWANDSISLRSEESTGPIAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGQTDDPPHHPWLIPHTCGEVCGKRLSTGENCKHKCLLLCHPGPCPPCPQTVNGICFCEKENKRVRCSAAKWSCGQLCKKTLLCKTHYCENVCHAGDCTQCSYTSIQPCQCNSEKAKRPCNDPIWQCKKPCNKLFSCGYHKCERICHSGNCGDCPNSGTLSCPCGANQRFVQCPDVMETCLGTCGKRHEGCDHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRALPCSKDFKCDTKCRGIRLCGKHGCGRKCCNGNCPPCEKICDKGLHCGRHKCTNICHRGPCYPCPLESKVTCRCKETCIRVPCGRERQTKPPKCNLPCKIKYKCGHSEENKHSCHFGDCPPCKAICDKQYPKCSHHCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCETPVPMVCFGEHETDQQPCHTASRRPCGRECGKPLGCGNHKCSLLCHLYSPVPEYPNVPSTCKQCNRECSVQRPEKCAHKCFVRACHPGPCRPCEILERLACHCGVTEIYLRCRELSTATEEMLSCKQQCPKNLDCGHRCRKTCHSRACGNQVCMKKTKVHCPCGTIKKEAPCNTVRNGESKIMCDNTCEAKKAAAKIEQEKEKQRLREVEEEKNRKELAEYEWKLSGKKKKYKEKKMVVGKDDRGLLKKYWVPISSFLVMMLGAIYYIFDVGLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- iTF_01440670;
- 80% Identity
- -