Basic Information

Insect: Hyppa rectilinea
Gene Symbol: Sall1
Assembly: GCA_951799385.1
Location: OX637312.1:2637310-2647210[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.9 1.7e+02 3.9 0.1 2 23 7 28 6 28 0.96

2 14 0.26 24 6.6 0.5 1 23 1006 1029 1006 1029 0.91

3 14 1.5 1.4e+02 4.2 0.9 1 23 1108 1130 1108 1130 0.96

4 14 2.2e-05 0.002 19.4 2.6 2 23 1133 1154 1132 1154 0.97

5 14 0.024 2.3 9.8 3.0 1 23 1160 1182 1160 1182 0.98

6 14 0.012 1.1 10.8 3.0 2 23 1189 1210 1188 1211 0.94

7 14 0.051 4.7 8.8 1.5 5 23 1224 1242 1223 1242 0.96

8 14 0.022 2 10.0 1.1 3 23 1249 1270 1248 1270 0.96

9 14 0.0061 0.57 11.7 0.3 2 23 1287 1307 1286 1307 0.98

10 14 0.0015 0.14 13.6 0.8 1 20 1313 1332 1313 1335 0.87

11 14 0.00049 0.046 15.1 0.7 1 23 1343 1365 1343 1365 0.99

12 14 0.0063 0.58 11.7 7.2 1 23 1371 1393 1371 1393 0.98

13 14 7.8e-06 0.00073 20.8 1.4 1 23 1399 1423 1399 1423 0.98

14 14 0.0018 0.16 13.4 4.2 1 23 1429 1451 1429 1452 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.9	1.7e+02	3.9	0.1	2	23	7	28	6	28	0.96
2	14	0.26	24	6.6	0.5	1	23	1006	1029	1006	1029	0.91
3	14	1.5	1.4e+02	4.2	0.9	1	23	1108	1130	1108	1130	0.96
4	14	2.2e-05	0.002	19.4	2.6	2	23	1133	1154	1132	1154	0.97
5	14	0.024	2.3	9.8	3.0	1	23	1160	1182	1160	1182	0.98
6	14	0.012	1.1	10.8	3.0	2	23	1189	1210	1188	1211	0.94
7	14	0.051	4.7	8.8	1.5	5	23	1224	1242	1223	1242	0.96
8	14	0.022	2	10.0	1.1	3	23	1249	1270	1248	1270	0.96
9	14	0.0061	0.57	11.7	0.3	2	23	1287	1307	1286	1307	0.98
10	14	0.0015	0.14	13.6	0.8	1	20	1313	1332	1313	1335	0.87
11	14	0.00049	0.046	15.1	0.7	1	23	1343	1365	1343	1365	0.99
12	14	0.0063	0.58	11.7	7.2	1	23	1371	1393	1371	1393	0.98
13	14	7.8e-06	0.00073	20.8	1.4	1	23	1399	1423	1399	1423	0.98
14	14	0.0018	0.16	13.4	4.2	1	23	1429	1451	1429	1452	0.95

Sequence Information

Coding Sequence: ATGGACCAACTTTCGGTGCAGTGCCCCGTGTGCACGCTATTCTTGCACAATGGGATAACCCTGGAGGCCCACTTGGATACCCATCCCAAAGACCAGGTTATAAAAGCTTTGTGTAATATAGCAAACAAGGGCTCTAATTATGCCAGCAGGACTTCCACACCGGTACATTCTGAGCGGTCATACAGGAGCAGGTCACGGACACCTGCCACTGATGACAGTGCCAAGTGGACTGGATCACGAAGTAATGAACATGAGCGCTACTGGCGTAGAACACCAAGTAGAGCATCAAAATCAACAACAGTATCAAATACATCTAGAAATGGTACACCTGATATTAGAATGCTTGATGTTAACTTTGAGAACCATGGCATTGCTGGTGGTGGTGCAGGACAGCATATAAACAATCCGTTTAATTTAAAAGCTGATAAGCTTCAGCAGACCTTCCAGTGTCCTGCAGTTCCAGAGTATGATCCACAGTTCGTTTACTATCCAGAGCAACAAGAGGACAGGGAGATTAAGTATTCCCGGAGTGCTGAGTACAATGCCATGGACAACAATATGTTTTCTTACAATGTGCCACCTCTGGCTGGGCCAGGTATGAAACTGTTACAAGGGGTGCCTAAAAAAGCGAATGACCTTGTTAAAGTTTTACCAAAACCAAATAACATACTCCTTAAGACCaatatgggtggtgtgcaataCATAGGGGCAGGGGCCAAACCCATGCATGTTATGGTGCCATCTGCACCTACTTTCATGCAGAAGAATGTGCAAAGCAACATGATCATGACTGGCAGTGTACCAAACCCACTGATGCACATTGATACCAAAACAACTTCACCCCCTCTAGCTAGCAACCAACTGAACCAAATGACTTCTGGTGCATTCACTCCAGGAACAACTGTTGTTACCCAAAACTCCCAAATTATTTACAGAGAAATGGTGCACAACATAGATGGTAAGCCTTTTATAACTACGATGCCCACAGTACTTGGAGCTCCTGAGAACGTctctagcttagctcaagctagcTCCATGTATCAGAATGTTATGGTTGTAGATCAGTTTGGAAATACTTCATGTATGTATACTACACCGCAACAAATCATGAACAAAGCATGTCCCACATCCATTTATGATGAGTCTGCTACTCTCATGCCTAATGCACACATTGATAAAACTGTACAAAGTATTACTGATCCCAAAACACTTATTATTGAGGTTGGTCCTCTCATACCTCCaactgaaagtatttgtgaagaTCCAAGCTCCACCGTACCACTGCCAGTCACCAGCAGTCCAGTAGACCATACTGAGATACCCATTGAGACAGTGGACCCTAAATATGAAGTGCAAGGCAGTACTAAAGGCTTGAAAATTCTGAGCAACATCAAGGTTGAAGTTCCTGTGCAACATCACAAGAACATGGTTGACACTGTCATGGATCTAACTGAGAGTAATGAGGCAGACTATACAGTAGAACGTGTTGAGTCACCTGACAAGATCTTACCTGATCTAGAAGATAACAACCACCTGTCTTCTGATGACACTCAGCCTTCATCAATGTCCAGTGCTGATAGCATGATCTCCCATACATTTTCTGTGATAAAGAATGTTGGTAATCCAACCAAAAGTTCTGATAGTAAGTTGGATACAGACTTTTCAGACAGCTGTCCTGTGCCAGATTTAATATGTAATGAGAAGCCTTCCATATCACCTTGTAGTGAGTTGTCAGAAAATGGCGACAATTCAACCGATCGTACCTCAATGTCTCCCAAACCTGAGAATAATCAAGTTAGCCATAGTAAGTTAGGACTTCCAGAAAAGAAAATTCAGCTTTCACAGAAGCCTTACAGGCACAACACACTAAGACTGAACAATATTTTTGTGAAGAAGCAGAAGAAAGTTTTGCAGATTAAGAATGCCAAGGCCTTTCCTGTTAGCAAAACAAAGAAAACTGAACAAAGAGACATGGTGTCTCCTACGTCATCTTCTTGCAGGTCGCCGGAAAATTTTACCATGAATAAACTGCACCAAGCAGATAAGACAGAATGTAAGGAGAAGACCAACATTTTGCAAACCATATCTGTGGAGGAGATCAAGGAAGGTGATGATAATAATGACTTTGATGTTGACACATCAGAACAGTCTATGGACATAGAACAGCTTGCATCTACTGATCTGAATCAGCCTGAGTTTGCTGCCAATCTTGATATGATACAGGTGAAGGAGGAAATAAACTCGAGCAACGAAGGAGGGTTTAGTAACGAGACAGTGACGACGGACCGCATGCTGACTCCACTGGAATCCTTACGACCTATAAATGTTGTTAGTTATGGTAATCTGTCCAATGAGGATTTTAACGAAGAGTCCAACGACCGGGAGTTACTGGACCTCGAAGCGGCATCTAAGAACAAACAGTTTGTCAGCATGATGAACGAGAATTATTTCGGGGACAATATTTACGCAGATTACTTTACTCCTGACCGCGTGGAGGCGTTCGACGCCGAGCGCGAGGCGGCGGGGTTCAAGGAGGGCGCTAAAGACGGTATGTACCTGTGGGGTGAGCCTTCGCAGAAGGACAACGACTTTGTGCTGCCTAATTTTATACACGAGAGTTACAAAATAGCCGAGAGTAATGGGATAGATTATTCTGAGCTAGGTACTAGAGAAGTGCAGGTGGATGTGGAGGTGGACGGGTGCGAGCGAGACAGCAAGGCGGACGTGCTAAGCGAGGGCCGCAGCGAGGGCGACGCGCCCATCAACATCTGCGCCGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGGCAGGAGAGCAACGGAGACATGGAGTCGCCCTGGAGCGGGATGTACACAGAGGTGACCCCCGCGGAGCCCTACGACCTGATCGCCCGGGAGAGCTGGGTGTCGGACGGGTCAGAGGTGGACGCGAGCGAGAAGCGGGAGCCCATCGAAGAAGACTTGCCGCTGCCGGCCCCGCCGCTGGCGCCCGCGTTCAGCCGCGCGCGCGTGCACACGTGCGGGGCGTGCGGCGCCACGTGCGCGTCGCTGAAGGCGCTGCGCGCGCACAAGGCGCTGCTGCACGCGCTGCCCACGTGCTCGGCCAGCAAGACGTCCTACAGCAGGCTGGTCACGGCGCGGGCCATCAAGAAGGAAGAAAAACCTGATACAAACAACCTACTACCACCAATAGACTCAAAGGACTCGATATCGTCGACGATCCTCCAAGTGTACGAGAGCATTCAAGTTGAGGAGGCCAAGCCGAAGATCGAGGTAGACCGGTTGATCAAGCAGGAAGTAAAGCGGAGACGGAAAGACTACGTGTGTCCTACCTGTAAGGTAGACCAGGGGAATCATGCGAAGTTCCAGGCTCATCTGAAGACACATCCGCTGGAGTGCCTCACGTGCGGCAAGTGCTTCTTCAGAAAAGCCAACCTGTCCTTGCATATAAAGACTCATTTAGGAATAAAGAATTATAAATGTGAGGTGTGCGAGAAGCGTTTCCTGACGCGCCAGAAGCTGTCGGAGCACCACAACGTGCACACGGGCCGCACGCCCATCAAGTGCACCATGTGCGACGACACCTTCCGCCGGTACTCCAACATGGTGCAGCACAGGGACCGCCACCACCTGGCCAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGGCTGGTGTTCCACTCGCGCGCCAAGCTGCGCTGGCACCAGGAGACGCACGCCGAGCGGCCGCGCGCCTGCCTGTACTGCAGCGACAAGTTCGTGCACGCCGCCTCGCTCACGCGCCACGTGCGCCGCTCGCACAACGAGTACTTCCTGGCCGAGCAGCACAAGGGCAAGCAGGACAACGTGCAGTGTCCTGTCTGCAAGCAGGTGTACCTGCGCGCGAACCTGCGCACCCACCTGCAGACGCACAGCGGCCAGCGGCCCTACATCTGCATCGTGTGCAACAAGTCGTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACGCGTCGCGCTCGGCCAAGCCCTACAAGTGCAGCCTGTGCAAGGGCGCCTTCATCCGCCAGACGGAGTACATCTCGCACATGAACTCGCACAAGTCCGTGCGGCCCTACACCTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTGCGCGAGCACGAGACGGCCAAGAAGTACGTGTGCAAGGTGGCCGAGTGCGGCAAGTCCTTCCACCGCAGCTACTACCTGTCCGAGCACATGAAGGTGCACAGCGGCGCGCGGCCCTTCGCCTGCAGCATCTGCGGCAAGACGTCCAGCAACAAGTCCAACCACAACAAGCACGTGAAGATCCACCACGCGCGCGAGCCCGTGGCCACGGAGGCGTAG
Protein Sequence: MDQLSVQCPVCTLFLHNGITLEAHLDTHPKDQVIKALCNIANKGSNYASRTSTPVHSERSYRSRSRTPATDDSAKWTGSRSNEHERYWRRTPSRASKSTTVSNTSRNGTPDIRMLDVNFENHGIAGGGAGQHINNPFNLKADKLQQTFQCPAVPEYDPQFVYYPEQQEDREIKYSRSAEYNAMDNNMFSYNVPPLAGPGMKLLQGVPKKANDLVKVLPKPNNILLKTNMGGVQYIGAGAKPMHVMVPSAPTFMQKNVQSNMIMTGSVPNPLMHIDTKTTSPPLASNQLNQMTSGAFTPGTTVVTQNSQIIYREMVHNIDGKPFITTMPTVLGAPENVSSLAQASSMYQNVMVVDQFGNTSCMYTTPQQIMNKACPTSIYDESATLMPNAHIDKTVQSITDPKTLIIEVGPLIPPTESICEDPSSTVPLPVTSSPVDHTEIPIETVDPKYEVQGSTKGLKILSNIKVEVPVQHHKNMVDTVMDLTESNEADYTVERVESPDKILPDLEDNNHLSSDDTQPSSMSSADSMISHTFSVIKNVGNPTKSSDSKLDTDFSDSCPVPDLICNEKPSISPCSELSENGDNSTDRTSMSPKPENNQVSHSKLGLPEKKIQLSQKPYRHNTLRLNNIFVKKQKKVLQIKNAKAFPVSKTKKTEQRDMVSPTSSSCRSPENFTMNKLHQADKTECKEKTNILQTISVEEIKEGDDNNDFDVDTSEQSMDIEQLASTDLNQPEFAANLDMIQVKEEINSSNEGGFSNETVTTDRMLTPLESLRPINVVSYGNLSNEDFNEESNDRELLDLEAASKNKQFVSMMNENYFGDNIYADYFTPDRVEAFDAEREAAGFKEGAKDGMYLWGEPSQKDNDFVLPNFIHESYKIAESNGIDYSELGTREVQVDVEVDGCERDSKADVLSEGRSEGDAPINICADERMPPRGELSGQESNGDMESPWSGMYTEVTPAEPYDLIARESWVSDGSEVDASEKREPIEEDLPLPAPPLAPAFSRARVHTCGACGATCASLKALRAHKALLHALPTCSASKTSYSRLVTARAIKKEEKPDTNNLLPPIDSKDSISSTILQVYESIQVEEAKPKIEVDRLIKQEVKRRRKDYVCPTCKVDQGNHAKFQAHLKTHPLECLTCGKCFFRKANLSLHIKTHLGIKNYKCEVCEKRFLTRQKLSEHHNVHTGRTPIKCTMCDDTFRRYSNMVQHRDRHHLAKRAKVRDFVCQCGLVFHSRAKLRWHQETHAERPRACLYCSDKFVHAASLTRHVRRSHNEYFLAEQHKGKQDNVQCPVCKQVYLRANLRTHLQTHSGQRPYICIVCNKSFTTKWNLKLHRWTHASRSAKPYKCSLCKGAFIRQTEYISHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHETAKKYVCKVAECGKSFHRSYYLSEHMKVHSGARPFACSICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908225;
90% Identity: iTF_01026666;
80% Identity: -