Basic Information

Insect: Hyppa rectilinea
Gene Symbol: -
Assembly: GCA_951799385.1
Location: OX637327.1:5802960-5810176[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.016 1.5 10.4 0.1 1 23 196 218 196 218 0.94

2 10 0.12 11 7.7 0.0 2 20 246 264 245 266 0.93

3 10 0.00021 0.02 16.3 0.3 3 23 291 311 289 311 0.96

4 10 7.3e-07 6.8e-05 24.0 0.2 1 23 315 337 315 337 0.98

5 10 0.073 6.8 8.3 0.8 1 23 342 365 342 365 0.94

6 10 0.17 16 7.2 0.4 1 23 371 394 371 394 0.92

7 10 7.6e-05 0.0071 17.7 0.7 1 23 401 424 401 424 0.98

8 10 2.7e-05 0.0025 19.1 2.3 1 23 430 452 430 452 0.98

9 10 0.00013 0.012 17.0 6.4 1 23 458 480 458 480 0.98

10 10 1.8e-06 0.00017 22.8 1.0 1 23 486 508 486 508 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.016	1.5	10.4	0.1	1	23	196	218	196	218	0.94
2	10	0.12	11	7.7	0.0	2	20	246	264	245	266	0.93
3	10	0.00021	0.02	16.3	0.3	3	23	291	311	289	311	0.96
4	10	7.3e-07	6.8e-05	24.0	0.2	1	23	315	337	315	337	0.98
5	10	0.073	6.8	8.3	0.8	1	23	342	365	342	365	0.94
6	10	0.17	16	7.2	0.4	1	23	371	394	371	394	0.92
7	10	7.6e-05	0.0071	17.7	0.7	1	23	401	424	401	424	0.98
8	10	2.7e-05	0.0025	19.1	2.3	1	23	430	452	430	452	0.98
9	10	0.00013	0.012	17.0	6.4	1	23	458	480	458	480	0.98
10	10	1.8e-06	0.00017	22.8	1.0	1	23	486	508	486	508	0.98

Sequence Information

Coding Sequence: ATGGATACAGAGATAATGGTAGAGGCGCTGCCATTGCTGGGGATGTGCAATTTGTGTTTAAACGAAGGTGCGGTAAAGAGTATGTTGATTGGACATAAGCACAATGGGAAATCGGAAGTTTATTCTGAGATGCTGGTGAAATGCTTTACAATAGACGTATCAATACTCCAATTGGGTGACACGAAGCGCCTTATATGTGAGCTGTGCATCAGTAGGCTACGTGACTGTGTGCTGTTCAGGGAGCAAGTGGAGTCATCTTTTAACACACTGGAGACTACGTATAAGTTGCATAaggGAGAAAAAAATGAGCATGACGGCATTAAAAGAGAGATAACTTTAAATGTAGATTTTGATGATGACTACCAGCATgacgttgatgatgatgatgatgatgaagatgatgtAGAGGATCCAGaaataaaacctTTAATCAAAACGGAACCAGAAGAATGCACAAGAAAAACTAGAAGcagaactgtaaaaaaaataacaaaatgccCCGTGAAAAAGTTTCACGATTTTAGTGAAACGGAGACCATGTTAAAAACGGGACTGTTCCCGTTCAAAATACGGAAAAACCGGACTTTCTCGTGCTCCATATGCCCGGAGAAATCAACGAATTTGGACGACATCAAAGTTCATATAGTTGACCACAACAAAACCAACTTGCATTTGGCATTCAAAAAAATGATCTTTTCAAACTCCCAACGGTTCTACAAGTCCGGAACGAAATTGAGATGCAAGATCTGTACAACAGATGTCGCTACTTACGAGGAACTAAGACAGCATGTAGAAAATTGTACCCGACTAAAATTTTCCAATCGCAAATGGAATAATTTACCGTTTAAACTAGAAAAAGATCAGTTAGATTGCCCGGTGTGcaagaaaacatttttgaattaCGTCAGTTTAAATACGCATATGAACGTCCATTATCCTAATTATATATGTGAGAATTGTGGCAAGGCTTTTGCTTCAAAAGCAAGGCTGAGAGGTCACATGCGGACCCACGAAGTTGGTACATTCCCTTGTCGATACTGCAACGCCTCATTCGACAGAGTAACGAAGAGAGAGAACCACGTATCCAAAGAACATAAATCCGGGATTAGATACGCTTGCAAACGCTGTAACATCTCCCTCACATCATTTTACGCCCGACAAAAACACTTGGCTGAAGTTCACAATGAAGAATTGAAACGGTATAAGTGTAAGGCGTGTCCCCAAAGTTATATCACCCCGGGACATTTGTCCAGTCATGTTCGCCGAGACCATTTGAACGAGCGAAATCACAAATGCGATAAATGCGATCTGGCGTTTTACACAAAGAATGCTCTTAAAATGCATATGATAAAGCATGACGGAGAAAGAATACACACTTGTCATGTTTGTCAAAAGTCGTATCAAAGAAAGAAGACGCTAAGAGAGCATTTACGGatacataataatgataaaCGATTCGTTTGTCCTGTGTGTGGGAGGGCTTTTACGCAGAAGTGCACTCTTAAAGGGCATTTGAAGGTCCATGAGCGAAAACCGGATATTGATGACCGTGTGATGCAGCCTTTACATTCTATTTAG
Protein Sequence: MDTEIMVEALPLLGMCNLCLNEGAVKSMLIGHKHNGKSEVYSEMLVKCFTIDVSILQLGDTKRLICELCISRLRDCVLFREQVESSFNTLETTYKLHKGEKNEHDGIKREITLNVDFDDDYQHDVDDDDDDEDDVEDPEIKPLIKTEPEECTRKTRSRTVKKITKCPVKKFHDFSETETMLKTGLFPFKIRKNRTFSCSICPEKSTNLDDIKVHIVDHNKTNLHLAFKKMIFSNSQRFYKSGTKLRCKICTTDVATYEELRQHVENCTRLKFSNRKWNNLPFKLEKDQLDCPVCKKTFLNYVSLNTHMNVHYPNYICENCGKAFASKARLRGHMRTHEVGTFPCRYCNASFDRVTKRENHVSKEHKSGIRYACKRCNISLTSFYARQKHLAEVHNEELKRYKCKACPQSYITPGHLSSHVRRDHLNERNHKCDKCDLAFYTKNALKMHMIKHDGERIHTCHVCQKSYQRKKTLREHLRIHNNDKRFVCPVCGRAFTQKCTLKGHLKVHERKPDIDDRVMQPLHSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00906417;
90% Identity: iTF_01084522;
80% Identity: -