Hrec022917.1
Basic Information
- Insect
- Hyppa rectilinea
- Gene Symbol
- Zfy1
- Assembly
- GCA_951799385.1
- Location
- OX637319.1:17621613-17630952[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.4 37 6.0 1.7 1 23 154 179 154 179 0.84 2 15 0.13 12 7.5 2.7 2 23 226 247 225 247 0.96 3 15 0.034 3.1 9.4 0.1 6 23 259 277 259 277 0.94 4 15 3.7 3.4e+02 3.0 0.4 3 23 289 310 288 310 0.92 5 15 1.5e-07 1.4e-05 26.2 1.6 2 23 333 354 333 354 0.97 6 15 2.5e-05 0.0023 19.3 1.3 1 23 360 383 360 383 0.96 7 15 0.095 8.9 8.0 0.0 1 23 389 411 389 411 0.92 8 15 1.4e-06 0.00013 23.1 2.0 1 23 417 439 417 439 0.98 9 15 0.4 37 6.0 3.5 1 23 559 581 559 581 0.95 10 15 0.00039 0.036 15.5 2.0 2 23 588 610 587 610 0.92 11 15 4e-06 0.00038 21.7 1.5 1 23 616 638 616 638 0.98 12 15 1.2e-06 0.00011 23.4 4.4 1 23 644 666 644 666 0.98 13 15 0.00011 0.011 17.2 0.2 1 23 672 694 672 694 0.98 14 15 0.00027 0.025 16.0 2.2 1 23 700 722 700 722 0.93 15 15 0.0009 0.083 14.3 1.7 1 23 728 751 728 751 0.93
Sequence Information
- Coding Sequence
- ATGCCTCGTTACGAGTACACGCCACGGGAGTATGCCGAAATGCATTTTATCTACGGAGAAGCAAGAGGTAATGCCAGGGCGGCCGCAAGATTGTATCGTGAAAGATACCCGAACCGGGATCGACATCCCGACTATCGCGTATTCATTAGAGTGCATAACGCGCTTCTTGAGGGAAGAATTCTTGGCACCGGAGTTGGGGGTGCCAGTGAAGGGCGACCGTCACAAGTCAATGACGAAATTATTATTCGAGAAATCGAGGAAGATTCGTCGGTCTCAATTCGCGTCATAGCGCAACGCACAGGTATTCCAAGATCGACGgcAGCAAATCTACCTAACGTTACTAATAGATCAAGTTTACGTGTAGAAGAGGAAGCACAGAGCAAGTTGCTTTACACAAGTGTCAGAAATGCTCTCATTGACTTTCATATTGATCTGGATGAAGATGATTCGGATGTAGAGTTTGTTTGCCAAAAGTGTGTGGAGAAGCCAGCGTTCACCACTGTGCACAATCTCACTGAACATATTCGACACGAGCACTCTCCTGACACACTCGACAGTAATGTTAAAGCATTCATCACAAACTACATAACGTTCGAACAAGTACTAGCAGAGCATTCCGACGAAGAGACACAATCTGATACTAAAGAGAAGCCCCAGATAGTTCTGCCGACCCTACACTGTCCGTTCTGCGCGTGTGTGTTCTCATCGGCCACGCGACTCGTGTACCATCTCAACAAACACGTAGAGGTGAACATGGCGGCCGGCGTCAAGTGCTGCGACCTCGTCTTCAGCGACAAGAAAAACTTCGTTCAACACTTGCAAGATGCTCACGTCGATAGGACAGCCGATACGCCAGTGCCAGCGTGCGTCAGTTGTGGCTTCACCGCAGACCACGCCAAAGAAATGAGACAGCATTATAAAGACGCACATAACGATGTGAAAATTACGAAAGAGAAAAAACTAGAGAGTCCAAAGAACCAGAGGTACATCCCAGCGGTGTGCCCCGAATGCAACAAGACGTTCTCCAACAAGTACAATATGTTCACCCACATGCGCAGTCACACGCACACTGCGGTCTATCCGTGCGACAAGTGCACCCGGACCTACCGCAACCAGGGGAACCTCACCTACCACAAGAGACTGGCGCACCAGGGAATACTCGGCTTCATTTGCATCGAGTGCGGGGAAGCGTTTCCCAGTCGGTCAGAGCGCGACATACACGCGCGGATACATTCGGGAGAGACGCCTTACAAGTGCCCGCACTGCGGCAAATCGTATCGCGCCAAGAACACACTCACACGACACCTCGAGATACACGCGGACATACGCAAATACGAGAGCCCCTGCGACTTGCCCGAGGAGCCCCGCAGTGTCCCCTATGTTCTGTCCGAGCTGTCCGATGACGAGCCGCTGGCCACGTTCGCCACCAAAAAGCCCGCGAAATTGTATACCAACTTCTACAGAGCACTCGTCAACTTTAGAGACCATTTTGTTAATGATCAACATCATGAGGATTATCCTGACTTCACCGACTCCAGTGTATGTGACGCTGAAGAGAACGACGTGGACAGGTTCGACGACCTGTCACAGTGCAATATGAGGCGGGACAGACTGGACGAGGAGACGAGGCTAGAGCTGAGAGAAGTGCAGATCAAAATCGACAACAAGACATACTATACGTGTAAGATCTGCAGCAAGAACCTAAGCTCCGCGCACACATACCTGTTCCACAAGCGCATTCACACGGGCGAGCGACCGTGCGTGTGTCACGTGTGCGGCAAGCAGTTCCGCGCACCCAACGGACTGCAGCGGCACCTCACGGAGACGCACGAGCGCGTGCGCCGATACAACTGCTCACTCTGTACCAAGAACTTTGCCAACTCACAGAATCTCAAGCAACACTTACGGATACACACCGGAGAGAAGCCTTTCGTGTGTTCTCACTGTGGGAAGAGGTTCACTCAGAGTGGTTCGTTACACGTGCACCTGAAGACACACAGTGAACAGTTTCCTTATGAGTGCGCGGAGTGCGGGGCTAAGTTTAGACTGCGGTCGGGGCTGGTGCGGCACAGGCTGAAACATACGGGCGAGCGGCCGCATGTGTGCGCGACGTGCGGCAAGGGGTTCCGGCAGCGACACGAGCTCACGACGCACAGCCTCGCGCACAGCGGCGCCGCGCCGCACGCCTGCGCGGCCTGCCCGCGCGCCTTCCGCCAGCGCCGCGCGCTGCGGCACCACGTGCGGCGCGTGCACGACGCGGGACCTCCCGACATCGCCTACAATGTCACACTCTACTAG
- Protein Sequence
- MPRYEYTPREYAEMHFIYGEARGNARAAARLYRERYPNRDRHPDYRVFIRVHNALLEGRILGTGVGGASEGRPSQVNDEIIIREIEEDSSVSIRVIAQRTGIPRSTAANLPNVTNRSSLRVEEEAQSKLLYTSVRNALIDFHIDLDEDDSDVEFVCQKCVEKPAFTTVHNLTEHIRHEHSPDTLDSNVKAFITNYITFEQVLAEHSDEETQSDTKEKPQIVLPTLHCPFCACVFSSATRLVYHLNKHVEVNMAAGVKCCDLVFSDKKNFVQHLQDAHVDRTADTPVPACVSCGFTADHAKEMRQHYKDAHNDVKITKEKKLESPKNQRYIPAVCPECNKTFSNKYNMFTHMRSHTHTAVYPCDKCTRTYRNQGNLTYHKRLAHQGILGFICIECGEAFPSRSERDIHARIHSGETPYKCPHCGKSYRAKNTLTRHLEIHADIRKYESPCDLPEEPRSVPYVLSELSDDEPLATFATKKPAKLYTNFYRALVNFRDHFVNDQHHEDYPDFTDSSVCDAEENDVDRFDDLSQCNMRRDRLDEETRLELREVQIKIDNKTYYTCKICSKNLSSAHTYLFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERVRRYNCSLCTKNFANSQNLKQHLRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYECAECGAKFRLRSGLVRHRLKHTGERPHVCATCGKGFRQRHELTTHSLAHSGAAPHACAACPRAFRQRRALRHHVRRVHDAGPPDIAYNVTLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01230874;
- 90% Identity
- iTF_00123588;
- 80% Identity
- -