Hrec032022.2
Basic Information
- Insect
- Hyppa rectilinea
- Gene Symbol
- -
- Assembly
- GCA_951799385.1
- Location
- OX637330.1:9319694-9358885[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 38 0.0015 0.14 13.6 2.8 1 23 475 497 475 497 0.99 2 38 0.21 19 6.9 1.1 1 23 515 538 515 538 0.90 3 38 0.049 4.5 8.9 0.5 2 23 545 566 544 566 0.94 4 38 0.00063 0.059 14.8 0.1 2 19 574 591 574 593 0.95 5 38 0.00048 0.045 15.2 7.8 1 23 609 631 609 631 0.95 6 38 0.00048 0.045 15.2 7.8 1 23 653 675 653 675 0.95 7 38 0.00048 0.045 15.2 7.8 1 23 697 719 697 719 0.95 8 38 0.00048 0.045 15.2 7.8 1 23 741 763 741 763 0.95 9 38 0.00048 0.045 15.2 7.8 1 23 785 807 785 807 0.95 10 38 0.00048 0.045 15.2 7.8 1 23 829 851 829 851 0.95 11 38 0.00048 0.045 15.2 7.8 1 23 873 895 873 895 0.95 12 38 0.00048 0.045 15.2 7.8 1 23 917 939 917 939 0.95 13 38 0.00048 0.045 15.2 7.8 1 23 961 983 961 983 0.95 14 38 0.00048 0.045 15.2 7.8 1 23 1005 1027 1005 1027 0.95 15 38 0.00048 0.045 15.2 7.8 1 23 1049 1071 1049 1071 0.95 16 38 0.00048 0.045 15.2 7.8 1 23 1093 1115 1093 1115 0.95 17 38 0.00048 0.045 15.2 7.8 1 23 1137 1159 1137 1159 0.95 18 38 0.00048 0.045 15.2 7.8 1 23 1181 1203 1181 1203 0.95 19 38 0.00048 0.045 15.2 7.8 1 23 1225 1247 1225 1247 0.95 20 38 0.00048 0.045 15.2 7.8 1 23 1269 1291 1269 1291 0.95 21 38 0.00048 0.045 15.2 7.8 1 23 1313 1335 1313 1335 0.95 22 38 0.00048 0.045 15.2 7.8 1 23 1357 1379 1357 1379 0.95 23 38 0.00048 0.045 15.2 7.8 1 23 1401 1423 1401 1423 0.95 24 38 0.00048 0.045 15.2 7.8 1 23 1445 1467 1445 1467 0.95 25 38 0.00048 0.045 15.2 7.8 1 23 1489 1511 1489 1511 0.95 26 38 0.00048 0.045 15.2 7.8 1 23 1533 1555 1533 1555 0.95 27 38 0.00048 0.045 15.2 7.8 1 23 1577 1599 1577 1599 0.95 28 38 0.00048 0.045 15.2 7.8 1 23 1621 1643 1621 1643 0.95 29 38 0.00048 0.045 15.2 7.8 1 23 1665 1687 1665 1687 0.95 30 38 0.00048 0.045 15.2 7.8 1 23 1709 1731 1709 1731 0.95 31 38 0.00048 0.045 15.2 7.8 1 23 1753 1775 1753 1775 0.95 32 38 0.00048 0.045 15.2 7.8 1 23 1797 1819 1797 1819 0.95 33 38 0.00048 0.045 15.2 7.8 1 23 1841 1863 1841 1863 0.95 34 38 0.00048 0.045 15.2 7.8 1 23 1885 1907 1885 1907 0.95 35 38 0.00048 0.045 15.2 7.8 1 23 1929 1951 1929 1951 0.95 36 38 0.00048 0.045 15.2 7.8 1 23 1973 1995 1973 1995 0.95 37 38 0.00048 0.045 15.2 7.8 1 23 2017 2039 2017 2039 0.95 38 38 0.00033 0.031 15.7 0.1 1 23 2044 2066 2044 2066 0.98
Sequence Information
- Coding Sequence
- atggcgctgtgtgaaagtCAGCTGGATTCGGTGTTGCCACAACTTAAAAGGGAGGAGTCGTCTAGCAGTGAGGGCAGTCAGAAGCAAACGCCGGAGAAGAAAACGAAAATCGATCATAATGGGGAGATTTATGGGTTGAATCAagTGCCTGGTGGATTGCCGCTATCAGTGGACTACCGCTCGCCAGTGTCACACTTCGTGCCGCCGGAGCTGTACGCGGCAAGACAGAAGCAGGAACCGATCACTACTGcTGAGATCAGCGACCCGCCGACACCTGTGAAGCGGAAGCGCGGCAGGCCCAGGGTGGACAAAACGAGCCCCGAGTACCTAGCCAACTTGGCAGCCAGAAAACAAGCCAAGGAGATGGcggCTATGATGAATAACAGGACGCCCGAAAGTGGGGAAAAGCGTAAGCGGGGAAGGCCACGCGTGGACAAAACAAGCCCAGAGTATTTGGCTAGAAAGAGGGCCCGCGAGttagAAGCGCTAGAGAGAAAAGCCAAGAGGGAGTATAAACGCCGTGCAACGGGAGATTCTGCAGCGTCATCATCTGCCGGGGAGACTACTCCCAGGACCAAGAGAAAATATACGAAGAGGACACCGAGCGCTAAGAAAGATGCTccaCCTTCGACGGAGCGCGTAAAGGGGAAACGTGGTCGTCCGCGGAAAGTGGACCAACTTGCGGCCAGCAATAAGCAGCAGCAGCAAGCTAAGATTCGCGTGAGGAATAATCTGATGCCGGTCAACTCTGAACCGATCACCTTGGACAGCGATGATGAACCGGATTTGGGTTCGCCAAGTCAGGCATCAGACTCGCTGAGCTTGGATGAGAATCTTCGAGCGTTGAGGCATATTCATGAGAAGTACGCCAATATAGATAAGGACGATCTATACGACACTCACTTGCTGGCCGCCAACTTTAAGAAGCCCCACGACTCCCAGCGCAGAGGTGATGATGACGAGGTGCTCTCCATCAGGAGTTCCGAAGGGTGCGCATCAGTCAAAGAAATGGACACGAGGGTCGAGAAATTGGAAGATAGTTCCAATTCTGACTCCGACAGCAGCAGTTCTGGATCTGAGCGACAAGCGGTCCCTTCCAAAAGCACACCTGGATCCCGAAACAAGCGTAGCAGCAGTTCCAGTTCTGGTTCCAGCACATCATCAAGCTCCGACTCCTCAAGTTCATCAGACAGTTCTGATACAGAGTCGGAATCTGGCGACGAGAAACCCAAGACTGAAGACCCACCGCCGGTGGTCAATCATACAACCAATGATGACGATAGGTCGTTCGGCGCTTGGTCGTACAGCGGGCCGGCTTCCGACAGCGGATCCGACTCAGATCCGGAACGCGCCGCGGATCCGGCAGCTCCGGCCTCGCACGATGAGATCAGCGAGTCTGACAATGAATCCGCTGACAAGAGCTTCCAATGTCATATCTGTTCCAAGTGGTATTCCACGCGGGTGACGCTAAAGATCCACCGCCGCGTGCACCAAAACCGCGGCGGCGGCAACTCCCGCTCGCGCGCGCGATCCTCCGACCGGTACGAGTGCGACTGCTGCAGCGAGACCTTCAACAGGCGCGAGAAGCTGTGGGAACACAAAGCGGAAGCACACCGCGGCGCCATGACAGTTCGATGTGAAGTCTGCCGGAAGTGCTTCGAAGACGACGCAGAGTTAGCTGAGCATGATCGCACACACACTGCAGACGAGCGAGCTGGCCGCTGCCCCACGTGCGGGCTGACGTTCCCGCGCTACGAGCAGCTGCGGCGCCACGCGGCCTGCGCGCacggcgccgcgccgccgcccggcTCCGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGTGAGTGCTACACGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCCCTCACGCGGCACATGCACAACCACGCCAAGCAGCTGTACCGCTGCGTCGTGTGTAAGGCATCATTCGGGCGAGCAGATCAACTGGCGCAGCATCTGAACAGCCATCTCGCGAACTACAAGCGTCTGAAGCCGTGA
- Protein Sequence
- MALCESQLDSVLPQLKREESSSSEGSQKQTPEKKTKIDHNGEIYGLNQVPGGLPLSVDYRSPVSHFVPPELYAARQKQEPITTAEISDPPTPVKRKRGRPRVDKTSPEYLANLAARKQAKEMAAMMNNRTPESGEKRKRGRPRVDKTSPEYLARKRARELEALERKAKREYKRRATGDSAASSSAGETTPRTKRKYTKRTPSAKKDAPPSTERVKGKRGRPRKVDQLAASNKQQQQAKIRVRNNLMPVNSEPITLDSDDEPDLGSPSQASDSLSLDENLRALRHIHEKYANIDKDDLYDTHLLAANFKKPHDSQRRGDDDEVLSIRSSEGCASVKEMDTRVEKLEDSSNSDSDSSSSGSERQAVPSKSTPGSRNKRSSSSSSGSSTSSSSDSSSSSDSSDTESESGDEKPKTEDPPPVVNHTTNDDDRSFGAWSYSGPASDSGSDSDPERAADPAAPASHDEISESDNESADKSFQCHICSKWYSTRVTLKIHRRVHQNRGGGNSRSRARSSDRYECDCCSETFNRREKLWEHKAEAHRGAMTVRCEVCRKCFEDDAELAEHDRTHTADERAGRCPTCGLTFPRYEQLRRHAACAHGAAPPPGSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSATRSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKASFGRADQLAQHLNSHLANYKRLKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -