Hham014103.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hypothenemus hampei
Gene Symbol
nfxl1
Assembly
GCA_013372445.1
Location
JABRWK010000002.1:2817607-2820731[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 1.7e+04 -7.8 5.6 15 19 161 165 160 165 0.81
2 19 0.0026 23 5.1 1.9 4 12 196 204 195 204 0.94
3 19 3e-08 0.00026 20.9 17.0 1 19 210 227 210 227 0.99
4 19 1.2e-07 0.0011 18.9 13.7 1 18 263 280 263 281 0.94
5 19 2 1.7e+04 -4.6 1.6 6 10 306 310 305 310 0.86
6 19 2.4e-10 2e-06 27.6 12.8 1 19 316 334 316 334 0.99
7 19 0.0028 24 5.0 9.4 3 18 371 386 369 387 0.90
8 19 0.87 7.5e+03 -3.0 2.4 1 5 396 400 396 407 0.85
9 19 9.7e-07 0.0084 16.1 18.5 1 18 421 438 421 439 0.97
10 19 1.1e-10 9.4e-07 28.7 13.5 1 19 448 466 448 466 0.98
11 19 0.2 1.8e+03 -0.9 1.8 5 10 494 499 494 499 0.95
12 19 0.0001 0.88 9.6 6.1 9 19 515 525 513 525 0.90
13 19 0.03 2.6e+02 1.7 9.2 1 12 534 544 534 544 0.96
14 19 0.41 3.5e+03 -1.9 2.0 13 19 571 577 570 577 0.81
15 19 0.00082 7.1 6.7 4.2 1 11 613 623 607 627 0.90
16 19 2 1.7e+04 -6.0 4.3 6 10 641 645 638 645 0.81
17 19 8.5e-05 0.74 9.9 13.1 4 19 655 670 653 670 0.91
18 19 8.4e-07 0.0073 16.3 10.3 1 16 713 727 713 733 0.92
19 19 0.95 8.3e+03 -3.1 0.9 6 10 763 767 762 767 0.89

Sequence Information

Coding Sequence
atgaataaactAAAGACAAATCCTTGGTCAAATAACAGGGTGACTAAACCTAAAAAAACTACCAGCGATTTTGGACCAGCCTTAGGGGCTTCTAGcgaatcaaaatttaaagaaatacagGCGAAACATCATAAAACTATCCAGAAACATGTCGAGAACTATGAGTCGTCATCAGAAGAAGAAGACTTGGACACTGTCAATCTTCTTGATTCGATACTAAAAGACTACAATACAAAAGGGGGTACTTCAGACCAATTAATTCGGACAAAAACCTTTATTGAGGACTCATTCATTTCTGGTGCAAGCACTTGTTTGATTTGCATTTCAAGAATTAAAAGAGATGATCAGATATGGAGTTGTCACGATTGTTATGGAGTCTTCCATTTAACTTGCATCCAACGCTGGTCCAAGGACACAGTAATGCAACAGAAACATAGAATTGAAGAACAAATGAGTAGCACAAATACATTATCCTGGTGTTGTCCTAAATGTCGATTCAAATACCTTCCACAAGAGTATCCAACAAAATATCAATGTTTTTGTGGAAAAGTGGAAAATCCTCGTTATGAACCCTTTTTAGTTCCCCACTCTTGTGGTGAAATTTGTCATAAGAATCTAAAACCTTTGTGCGGGCACAAATGCTTACTTTTATGTCATCCAGGTCCCTGTCCTCCATGTCCAGTTACTGTAACAGTTAGTTGTTATTGCGGTTGTCAAAAGCCCACTTTGAGGAGGTGTTGCTACAAGGGCTGGTCCTGTGGCAATAAATGCAATAAACTTTTAAGTTGTAACAAACATAAATGCAATGCGGAGTGTCATTCTGGAGATTGTCCTCCTTGTGAAAAGAAAAGCATTCAGAAATGTCTGTGTTTATCAAAACAAGCATTAAGAGAGTGCGCTTCTCCTCAATGGCAATGTGAGACAGTTTGTCTTAAACCGCTGGACTGTGGTAATCATAAATGTCAAGTGGTGTGCCATGAGGGTGCATGTGAAAGTTGTCCATTAAAGAAGCAAAGGTTTTGTCCATGTGGAAAAAATTCCTTCATATTGCCATGCACTGAGGCGACACCTACGTGCGGCTTAACGTGTGATAAGCTGCTGGACTGTCAATTGCATAATTGCAATTCCCGGTGTCACAAAGATAAATGCGGTTTGtgtttGGAAGTTGTTGAGAAGTCTTGCAGGTGTGGTCAACATTCCAAAGAAATCCAATGTTGTAAGCAATATTTATGCGAAACCAAATGCAAGAAAATCAAAGATTGCGGGAAGCATCCGTGTAATAGAAAAtGTTGCGACGGCAATTGTCCGCCTTGCGAGAAACCTTGCGGCAACACTTTACAGTGTGGGAACCATAAATGTTCCTCTGTTTGTCACAGGGGACCTTGTTATCCCTGTCAACAAACAAAACAGATTTCTTGCCGATGCACCTTCACGAAAATCACCGTGCCCTGTGGTCGAAGGCACAAAATTAAACCGCCAAAATGCCAACAATTATGTCTatTGTCTCCAGATTGTGACCATGACATGCGAACGGACAATCATAAGTGTCATTTCGGAGATTGTCCCCCCTGTAAGCAGATATGCCTGAAGGAACAGGCCTGTGGACATCATTGTCGCGCCATTTGTCATTCAGCAGTTCTTGTAAAAGTTCAGGGTCCAAAACCGAACATGCCCTGGGAACAAAATGCACCTGTAGTAGAAAAACAGGCTCAGCCTTGTCCCGACTGTAAAATTCCCGTTACAGTAACCTGTTTTGGTGGCCATGAAACTGCCGCTTGGCCGTGTTACATGGCCAAACCAAGCAGTTGCGGTCGATCATGTGGACGTTTGTTGCCTTGCACCAATCATAAGTGTTCCTTGGCCTGTCATGTTGTTGATGGTGCAATAAATGAATTGCAGGCCGGAAGTAATTGTGAACAATGTGAAAATCCTTGTATGAAATCCCGGCCGGAAAATTGTACTCACCTTTGTCCCAACCCTTGTCATGCAGGCGATTGTCCTCTGTGTAAGCAAATACTTCGAATTAAATGTCACTGTGGTATTTCTCAACTTTATGTTCAATGTTATCAATGGTTGGATGTGGCCAAACGAGATGAGCTTCAATGTTGCGGCAATCAATGTCCTAAAAATtaTGGCTGTGGCCATCGCTGCAAGGCCAACTGTCATCCAGGTGATTGTCCCCTTGCAGATttatgtaaaaagaaaattaaaataacttgcAAATGTAGAAGATTGAAAAAAGAGTTTCAATGTGAAACTGTGAGAAAGGGTTTGGCCATTATAGAGTGCGATGAAGTTTGTTTAGAAATACAAATGGAAGAAGAGAAGAAGAAGGTAATTGAGGACGAGTTAAGACGTAAAGAAGAGATGGCAAGGATGCAAAAAGAATTGGAGATGtttgagaaaaagttttcAGGCAAGAAAAAGAATCGagagaaaaaagtttacaGTGAAAGCACCGACGATGgttttctaagaaaatattGGATTTATTTGTTAGCGGTTTTCATACTTATCGTTTCGTTCATGGTTTATTACTTGctaaatttgtga
Protein Sequence
MNKLKTNPWSNNRVTKPKKTTSDFGPALGASSESKFKEIQAKHHKTIQKHVENYESSSEEEDLDTVNLLDSILKDYNTKGGTSDQLIRTKTFIEDSFISGASTCLICISRIKRDDQIWSCHDCYGVFHLTCIQRWSKDTVMQQKHRIEEQMSSTNTLSWCCPKCRFKYLPQEYPTKYQCFCGKVENPRYEPFLVPHSCGEICHKNLKPLCGHKCLLLCHPGPCPPCPVTVTVSCYCGCQKPTLRRCCYKGWSCGNKCNKLLSCNKHKCNAECHSGDCPPCEKKSIQKCLCLSKQALRECASPQWQCETVCLKPLDCGNHKCQVVCHEGACESCPLKKQRFCPCGKNSFILPCTEATPTCGLTCDKLLDCQLHNCNSRCHKDKCGLCLEVVEKSCRCGQHSKEIQCCKQYLCETKCKKIKDCGKHPCNRKCCDGNCPPCEKPCGNTLQCGNHKCSSVCHRGPCYPCQQTKQISCRCTFTKITVPCGRRHKIKPPKCQQLCLLSPDCDHDMRTDNHKCHFGDCPPCKQICLKEQACGHHCRAICHSAVLVKVQGPKPNMPWEQNAPVVEKQAQPCPDCKIPVTVTCFGGHETAAWPCYMAKPSSCGRSCGRLLPCTNHKCSLACHVVDGAINELQAGSNCEQCENPCMKSRPENCTHLCPNPCHAGDCPLCKQILRIKCHCGISQLYVQCYQWLDVAKRDELQCCGNQCPKNYGCGHRCKANCHPGDCPLADLCKKKIKITCKCRRLKKEFQCETVRKGLAIIECDEVCLEIQMEEEKKKVIEDELRRKEEMARMQKELEMFEKKFSGKKKNREKKVYSESTDDGFLRKYWIYLLAVFILIVSFMVYYLLNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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