Hham007425.1
Basic Information
- Insect
- Hypothenemus hampei
- Gene Symbol
- GATA-B
- Assembly
- GCA_013372445.1
- Location
- JABRWK010000025.1:949265-963708[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-18 1.2e-14 53.5 2.7 1 34 300 332 300 334 0.97 2 2 4.9e-17 1.2e-13 50.3 4.9 1 35 354 387 354 388 0.97
Sequence Information
- Coding Sequence
- ATGTTATGCAACCAATTAAACGTTCAATTGTTTACAGATGTACAGTACACGGATACGGCGACCCCTTACAGTCCCGCCTCCCAGACGGAGGGGGCGGAGTTATCTCCTGCTTCTCGACCGGCCACGCCTTTGGAGTTCACCACTTACCAACCGAACGAAGCCGAACAAGACAATTATCACGCAGCGTTGAATCTTATACGTGGAGAAAACGGAACGTTTTTTAGATTCGATGAGGTACAAATCGAAGAAACGCCAACAGGAACTTTTTTACAATTGGGCGCCTCTCAAGCCGCCATGTCAAATGGCACTTCTCCACAGCAAAGCGAAACGCCCAGCCCGGGGTCCCCCAATAGAGGCACGGCTTATTCCTCGTTGGCACTCTCCCAAAACACGACAAACGACCAAAACGTGTCAATTATCGAACCTGTAACCGCCCAACTTACTCAACTCACAAGTCACATAAGTTATACTGGAGGATTGGACACTAGCAACAATACATTTACttctTTGTACTCAAGAAATTCCGGATACAACGCGCCCACAATGCATTATTACAATACTGGTTCTCCAGAAATGCATGCCCAAAATCAGCTCTGGACAAATAGCACGGGCGTCGGTTCCAACAACAATCTGTTAACCGAAGATTATCCAGGTGCGGTCACGTCTCTTCCGAACACGACCACTCTCCCAGCATTCAATCGGTTGTCCACGTTTCAAAATAGTCCCAGGACGAATGCATGCAGCACAATGGGATACCAGGATTTCCCTTACGGGGACTGTGTTACTGGGACTTATAGAATACCACCTCCCGCGCCCCAAAAACGAATGAGCGCTGCTGGGACCCTATCAGCGAttgCTCCAGGCACGACCACGGAATACTTCACCGAAGGTAGAGAGTGCGTAAATTGTGGAGCAATTGATACTCCGTTGTGGCGTAGAGATGGTACCGGCCATTACCTTTGCAACGCCTGCGGACTCTACCATAAAATGAACGGCATGAACCGACCCTTAGTCAAGCAGCCTCGTAGATTGtctGCGTCACGTAGGGCCGGTTTAACGTGCACCAATTGCCAAACCAATGTTACGGCGCTTTGGAGGAGGAACACGCAAGGCGAACCAGTGTGTAACGCTTGCGGGCTTTACTATAAACTGCATTCCGTTAATCGGCCATTGTCGATGAAGAAAGACACCATTCAGacgAGAAAACGGAAACCAAAAGGGAGTAAATTGAGCCAATCGCGAAGCAACCCGGCATCCAATAAGGCTAGTTTAAACAATCGAATTAAAGTAGAACATTGTGTTAAACTGGAATCTACTGGACTAGACTCTTTCAATTTGACCCAGCTACAGCAAACGAACTCAAATTTCATGTATCAAAATCAAGCCCATTTGAGCCCTTATTCGTCGCCGCAAAATCTGTCCcaaaatgattattataatGTGTTACCGAATACGGCAAGTCCCAGTCCTCAATCAAATCACTCCGAGTCTCCACATTCACCGTTAATgttaaacaacaacaacacaAAAGTGATCATTCATGATCACAACTTGGAAAGGCCTACCGTTGTTTCGTTGActcaataa
- Protein Sequence
- MLCNQLNVQLFTDVQYTDTATPYSPASQTEGAELSPASRPATPLEFTTYQPNEAEQDNYHAALNLIRGENGTFFRFDEVQIEETPTGTFLQLGASQAAMSNGTSPQQSETPSPGSPNRGTAYSSLALSQNTTNDQNVSIIEPVTAQLTQLTSHISYTGGLDTSNNTFTSLYSRNSGYNAPTMHYYNTGSPEMHAQNQLWTNSTGVGSNNNLLTEDYPGAVTSLPNTTTLPAFNRLSTFQNSPRTNACSTMGYQDFPYGDCVTGTYRIPPPAPQKRMSAAGTLSAIAPGTTTEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCQTNVTALWRRNTQGEPVCNACGLYYKLHSVNRPLSMKKDTIQTRKRKPKGSKLSQSRSNPASNKASLNNRIKVEHCVKLESTGLDSFNLTQLQQTNSNFMYQNQAHLSPYSSPQNLSQNDYYNVLPNTASPSPQSNHSESPHSPLMLNNNNTKVIIHDHNLERPTVVSLTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -