Basic Information

Insect: Hypothenemus hampei
Gene Symbol: Hivep1
Assembly: GCA_013372445.1
Location: JABRWK010000050.1:364314-384542[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 9.3e-05 0.0079 16.6 1.7 1 23 192 214 192 214 0.98

2 8 0.0016 0.13 12.7 5.1 1 21 220 240 220 244 0.89

3 8 0.058 4.9 7.8 0.1 2 20 399 417 398 419 0.92

4 8 2.5e-06 0.00021 21.5 2.0 1 23 998 1020 998 1020 0.99

5 8 3.8e-06 0.00032 20.9 4.5 1 23 1026 1050 1026 1050 0.92

6 8 1.5e-05 0.0013 19.0 1.4 2 23 1470 1491 1469 1491 0.97

7 8 0.00015 0.013 15.9 2.4 1 23 1497 1521 1497 1521 0.92

8 8 0.00049 0.042 14.3 2.7 1 23 1539 1563 1539 1563 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	9.3e-05	0.0079	16.6	1.7	1	23	192	214	192	214	0.98
2	8	0.0016	0.13	12.7	5.1	1	21	220	240	220	244	0.89
3	8	0.058	4.9	7.8	0.1	2	20	399	417	398	419	0.92
4	8	2.5e-06	0.00021	21.5	2.0	1	23	998	1020	998	1020	0.99
5	8	3.8e-06	0.00032	20.9	4.5	1	23	1026	1050	1026	1050	0.92
6	8	1.5e-05	0.0013	19.0	1.4	2	23	1470	1491	1469	1491	0.97
7	8	0.00015	0.013	15.9	2.4	1	23	1497	1521	1497	1521	0.92
8	8	0.00049	0.042	14.3	2.7	1	23	1539	1563	1539	1563	0.93

Sequence Information

Coding Sequence: ATGGACAGGGGTAGTATCGACAACTATTTACACAAGAAATTCAAGAAACAATTGAGCATTGAGCCAAAATCGCTTAGTAACAATCATCAACAAAATGATAAAGAGAACAAGGATCGTTTTAGGATCGTGGACCCGGGTGAGGAAAAAGGGGATTTCCCTAATGTCCCAAGCAAAGACAATAATAAACCAACGACCGTGCCAAATCATAGTACAAACAGTGTCAGTAGCGGCGAAGGCGCAAACGCAATCGAAGCTCCTGACCTGTCCAACAACAACAAGTCTTCCATATCAAGCGAAAGTGGGAACTTCAAACTGTGCATatcaaaaaacgaagaaattcTTCTTGATCGTAGTTTAGTTAATTTTGATATCTCCACTTTTAAATGCGGCAATTTGACGACCAAACTTATTAATAGTAATAGCAGTAGTTCACCCAGCGAAGTACCCGCCGAGTACTATAGTCAACAGGACAGGACGCCACCTCTTGTGCAAGAGGAAGAGCATAATAAGTGCGATCAGCAATACAAAAATGAGGACACTGTTCCGCAGCCCGAAAAGAACCCGAACGGAAAATACGTGTGTCATTATTGTAATTTGGTATGTGCCAAACCCAGCGTGCTTCAGAAGCATATCAGAGCACACACTAACGAACGCCCATATCCATGCACCAGTTGCGGATTCAGTTTTAAAACGCGTTCGAACTTGTATAAACATTGCAGGTCCCGAACACATGCCAATCGGGTGATGGGAGTTAAAGCTCAAGAAAATGTGGAAACACAAAATTTCAGTGATAGTGCCACCCAAACTCCACAAGAAACTGTAGATGGTGCCAATGTAAGAAGTAAACCGTATAAGCCAAGATTTCATACTGTTCAGCATTGCgagcaacaacaacagcaggAAGAAGAGAGAACATTTAGTGGAACGGATTTATCGCATCACATTAACGAAATCATAAGCAAAAATAATTCCATCGTAAACTCAAGCGAtccaaatttgttaaaaagacGGTTCAGTGAAGTATCAGATAATACAACCAACGATTATAATAGAACGACCTACAGCCCTTCTTCAGATGAACCGTTAAACCTCACCAATAAGAATCGGAAAAGATGTATGAGCGAAGCTGCGGAACCCGTAATGCAAAAGAGTCTAATTAAAGAGCTGCTATTAAAGAACCTTTATTCGGACATGCAATGTCCATACTGTAAAATGATTTTCCAAACTGTAACGGAATTGGAGCTACATAAATTGCGAAGCTGCAAAGGCAAGCCTTCGGAAGCGAAATACACCAGGAGCAGTTCCGTGAATGTGGCttcaattttaactaaaaacaagAATGCATTTGATAATATCCCGCAATTCCAAAGTGcagtttttccattaagtTCACCAGGACCATTTTTAGGGAAAACTCGTTTGGTAGATGGGGATAAAAACAGGTCTTTTTCGTTTGATTCTGTTAATGTTACTTCAATCGAAACAACTACGTCTCCAAATTATGTTCTATCTCCTGTATCTTTAAAAGAGGAGAAAAAGCCACCCGTGCGGATGTTTGGTGGAGaagtgaaaattcaaaatatccgTTCCGGTCAGAGTCAAAGTTATAGAATTGATAGCAAGGAATCGAATAGGCATTCGGATGGGAGTTTTAATGAGTTTGAAAGCAAAATGAATGAGAACAGAGTGGTAAAGTCCACTTTACAGTCCGGAGGAACGGTGCTTACAAATAAAACCTCTAAGGAGGAACCTAAAATTATGAGAGACGTAATTCGAGTGTACGAAAATACCTCTGTCTCTCCCAACATAGATATGGCAAATTTAGGAAAGCCtcattttaattatgattCTACCAGGTTAGATTTAGATCCTATGGAAAGCAAATTAACAAATGAGTCGAAATACCCTAACAGGTCAGACTTTTGTCAGAACGCTGTGAAACTTTTAGCTCCCAATTTGAAACATCCCACCATTCACATGTCGGGAATGATGCCCTGTATATATAGCTCGGAGCCCAGAGTTGTTTCCCCTTCTTTGCTGACTAAACCCAAGGGCAAATTATCCATGACAAACATATCATCATCGTTAGTAGAAACAGAGAGTGACCGTAGAAGCAGCCCTTTTCGACCAGTCGCAAGAAGTGTGATTCAAAAACCAGTGGAATCCATAAACAGTGTATGCAACCCGATGAATTTATTAgtgaatggaaaaattgtgCGTTACGTTCCTGGAATGCCTGGTCCAGTCGCCGCTGAAGTTCCCATGGAATATCCCGGTGTCCACGTTACTACTGCAGAAAAAAATTCGCCaagtaaaaatgaaagtaGTGTTATCCATAAGCCGATCACTCCAATTGTATTCAAGGGGTTTGATAAAAAGCTAGAGAAACTCCAAGAGCCCACAGCACctacaaaaattgttgttgaGCCGCCCAAATTGAAATCTCCTAGCGTAGAAACGTCTTGTGAACAAAAGAAGTTTGCGAGACCAAATAGTTTGGCACTCAAACCCACCACCGCATCCTTGAAACAGCACCACGGCCTCACTCCCACGATCTTCAATCAGATCCTTATCAGTCCAGACACGCCTCGCGTGGAGAAAAAATACGCTCAACACCTGTTTGACGGCAATTATTTCAGTTACTTGGGTTTGAAGAGTTCTACCAAGCCTGTTTATTGTACTCTGAACAAAACACAACCGTTTTACGTGCctcattttaagaaattaagcATGTACTCGGAGTGGAGGCAGCAGGACACCAAAGTGGACAAGATGTATGTCAGTGCTTACGATTCCAGACAAAGAAATCAGCGGTATACCACTGCTGGACGGACTGATGCCAATCTGATTATTCATTCTAGTTACAAGtaTTCTTCCTCGGATTTATCAAATAAGAGTGAAAAAGATGAAGATGCTCAAAAAAGTGGTATAGTAGGAGGCTATGAATGCAACGAGGAGTCTCCTTATATTCGTGGACGAGGTAGAGGTAGATATGTGTGTGAACAGTGTGGAATTCGTTGCAAGAAGCCATCGATGCTCAAAAAACACATTAGGACACATTCGAATGATCGACCTTACGCTTGCAATCATTGTAATTTCAGttttaaaacaaaaggtaACCTAACTAAACATATGAAGAGCAAATCTCATACTAAAAACTATACAGCGACCAGTAGTGGGTCAGGATCCTCAACTAGGCTCAGTGGGTCGCAAAGTTCCGATTCTGATACAGATGATAGTGGCATGGACAGTAGTgatgaaTCAATGACTCGACAACAGGAACATGAAGCAGCTTACGGTCTACTATCCCTGTCACAGAAAACCTCAGTTTCAGTGCCTTCAACTGAATTACTGAGCCCTTCGTCAGGTATAATCCGAACAACAAGTCCAGCATCTTCAAGTGATCAATTTATTACCTCGGAAGAAGTGGCATATGTCTCCAAAACCAATTATGcaaaaaacaagattttagACAATCTAAAATTCAAACCGAATCGGCAAATCACGGACAATCTTTCACCGAGTGCGAGCGAAGAAAAGAACAAAGACGATGAGAGTTTAACTGCATATCTAGGCAAAACTACTATGACAAGACCGTTGACTTATCCCTACACCTGTCCGATAGTAGATtctaaaacagaaaaaaatgttttggaaCCTCCCACACCTGAACCAAAAAGCATAAAACAGTTTCATGTAATTCAAAAGTACGCCAAGCCGTCTATTGAACGTGAATCCGAGTATCGTCAAGAAAAACCTGCCACTGTCTATTTACCTAGTACAGTGCCTACTTTGAAAGTCAATGATGTAGTAGTGGAGGAAGGTCCTGTAGAAAGGAAACGGAAAATTGCTGTGATCGaaaatagttataaaaataaacttcataGGAATGATGAAGTTATGGATCTATCCATTAATTCCAGTAAAAATAGGGATCCGCCAAGCGTTGTTAGaatTGAAAGGGTAAACCAATATCAGGGTTACGATACACCTCGACGTGAAGAAAATTACCAGGAAATCCGAGTACTAGACTATAGGATATCATCAGATTTGAGCGAGAGAAAACGCGTAGAAGAGTTGAACTATCGCAACCTGGAACTGAACAGAAAAATTACCGCACCTGAATCAATGTTTCCCAATAACAACCAAGATGTGGAAATGAACAGTAACAGCAGCAATGATACAAGACCAATGGACTACGATAACAGTGCAATGGAAACTCTAGCGGAGGTAGCCACCAAACAGGTGAAATTAGACAAGAATATGATGGCTAAAAATGTAGCTTCGGAGTTCCTTAAATTGGCCActcaaatcgaaaatttggACGGCACAAGAGAGACCAACAACTTTATTCCTGCTACGAAGGAAGCTGTTAATGATTTGATCGTCAAGTCGGAGGGAAATAAAAGCTGTACGATATgctcaaaaagttttaataaacccTTCCAGTTAAGATTGCATATGAACATACATTATTTGGAGCGCCCATTCCGATGTGATTCTTGTTCAGTGAGTTTTAGAACTAAGGGACATTTACAAAAACACGAAAGAAGCGCTAGTCATTACAGCAAATTATCCTCGGCTCCTGCACAATCGTCATCTGAGCCAAGACCATTTAAATGTTCAGACTGCAATATTGCTTTTAGAATTCATGGTCATTTAGCCAAACATTTACGATCCAAAATGCATATAATGAAATTGGAATGTTTGGCTAAAATTCCATTTGGGCTTTATGCAGAACTGGAAAGATCTAACAGTCTTCTCACTGAAATTAACACTAGTGATGGGGACCAGTGTTTGGAGAGTTTAAAgACTTTAGCCAAGAAAGTGTTTATGAATGATCCGGAAAAACTTCAAACGTTAACCAACGAAGGGGAACCTGGATCGAATTTAGACCCAGATGgctaa
Protein Sequence: MDRGSIDNYLHKKFKKQLSIEPKSLSNNHQQNDKENKDRFRIVDPGEEKGDFPNVPSKDNNKPTTVPNHSTNSVSSGEGANAIEAPDLSNNNKSSISSESGNFKLCISKNEEILLDRSLVNFDISTFKCGNLTTKLINSNSSSSPSEVPAEYYSQQDRTPPLVQEEEHNKCDQQYKNEDTVPQPEKNPNGKYVCHYCNLVCAKPSVLQKHIRAHTNERPYPCTSCGFSFKTRSNLYKHCRSRTHANRVMGVKAQENVETQNFSDSATQTPQETVDGANVRSKPYKPRFHTVQHCEQQQQQEEERTFSGTDLSHHINEIISKNNSIVNSSDPNLLKRRFSEVSDNTTNDYNRTTYSPSSDEPLNLTNKNRKRCMSEAAEPVMQKSLIKELLLKNLYSDMQCPYCKMIFQTVTELELHKLRSCKGKPSEAKYTRSSSVNVASILTKNKNAFDNIPQFQSAVFPLSSPGPFLGKTRLVDGDKNRSFSFDSVNVTSIETTTSPNYVLSPVSLKEEKKPPVRMFGGEVKIQNIRSGQSQSYRIDSKESNRHSDGSFNEFESKMNENRVVKSTLQSGGTVLTNKTSKEEPKIMRDVIRVYENTSVSPNIDMANLGKPHFNYDSTRLDLDPMESKLTNESKYPNRSDFCQNAVKLLAPNLKHPTIHMSGMMPCIYSSEPRVVSPSLLTKPKGKLSMTNISSSLVETESDRRSSPFRPVARSVIQKPVESINSVCNPMNLLVNGKIVRYVPGMPGPVAAEVPMEYPGVHVTTAEKNSPSKNESSVIHKPITPIVFKGFDKKLEKLQEPTAPTKIVVEPPKLKSPSVETSCEQKKFARPNSLALKPTTASLKQHHGLTPTIFNQILISPDTPRVEKKYAQHLFDGNYFSYLGLKSSTKPVYCTLNKTQPFYVPHFKKLSMYSEWRQQDTKVDKMYVSAYDSRQRNQRYTTAGRTDANLIIHSSYKYSSSDLSNKSEKDEDAQKSGIVGGYECNEESPYIRGRGRGRYVCEQCGIRCKKPSMLKKHIRTHSNDRPYACNHCNFSFKTKGNLTKHMKSKSHTKNYTATSSGSGSSTRLSGSQSSDSDTDDSGMDSSDESMTRQQEHEAAYGLLSLSQKTSVSVPSTELLSPSSGIIRTTSPASSSDQFITSEEVAYVSKTNYAKNKILDNLKFKPNRQITDNLSPSASEEKNKDDESLTAYLGKTTMTRPLTYPYTCPIVDSKTEKNVLEPPTPEPKSIKQFHVIQKYAKPSIERESEYRQEKPATVYLPSTVPTLKVNDVVVEEGPVERKRKIAVIENSYKNKLHRNDEVMDLSINSSKNRDPPSVVRIERVNQYQGYDTPRREENYQEIRVLDYRISSDLSERKRVEELNYRNLELNRKITAPESMFPNNNQDVEMNSNSSNDTRPMDYDNSAMETLAEVATKQVKLDKNMMAKNVASEFLKLATQIENLDGTRETNNFIPATKEAVNDLIVKSEGNKSCTICSKSFNKPFQLRLHMNIHYLERPFRCDSCSVSFRTKGHLQKHERSASHYSKLSSAPAQSSSEPRPFKCSDCNIAFRIHGHLAKHLRSKMHIMKLECLAKIPFGLYAELERSNSLLTEINTSDGDQCLESLKTLAKKVFMNDPEKLQTLTNEGEPGSNLDPDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -