Basic Information

Gene Symbol
Zfhx3
Assembly
GCA_013372445.1
Location
JABRWK010000007.1:1211919-1222944[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 4.9 4.1e+02 1.7 0.2 2 23 142 164 141 164 0.87
2 20 0.00019 0.016 15.6 1.8 2 23 298 320 297 320 0.95
3 20 4.7e-05 0.004 17.5 0.7 1 23 352 376 352 376 0.92
4 20 0.005 0.42 11.1 0.5 1 22 418 439 418 442 0.91
5 20 9.2 7.8e+02 0.8 4.2 1 20 586 605 586 610 0.89
6 20 5.4 4.6e+02 1.6 0.2 2 19 643 660 642 663 0.94
7 20 0.78 66 4.2 1.0 1 23 691 715 691 715 0.91
8 20 3.6 3.1e+02 2.1 0.2 1 22 802 823 802 825 0.79
9 20 0.47 40 4.9 0.4 2 23 833 855 832 855 0.93
10 20 0.034 2.9 8.5 3.9 2 21 938 957 938 961 0.91
11 20 0.043 3.7 8.2 1.3 1 23 974 999 974 999 0.92
12 20 0.0032 0.27 11.7 1.6 1 23 1017 1039 1017 1039 0.97
13 20 0.0007 0.059 13.8 0.7 2 23 1046 1068 1045 1068 0.94
14 20 0.00038 0.032 14.6 3.0 1 23 1179 1203 1179 1203 0.92
15 20 0.0055 0.46 11.0 0.6 1 22 1223 1244 1223 1247 0.89
16 20 0.0011 0.093 13.2 0.2 1 23 1297 1321 1297 1321 0.93
17 20 0.00014 0.012 16.0 0.1 3 21 1388 1406 1386 1407 0.93
18 20 0.55 47 4.7 1.5 2 19 1540 1557 1539 1562 0.90
19 20 0.00012 0.0099 16.2 2.5 1 23 2105 2127 2105 2127 0.99
20 20 0.0008 0.068 13.6 0.3 1 23 2219 2241 2219 2241 0.98

Sequence Information

Coding Sequence
ATGCCCACGTCGTCCACGGCTCCTGAGCCGACGACGCGGCCCGACGCCGCCATAATGAGTCCCGAACAAGAGGCATCGCCACCCCCGGCTGCTCCGGGGGCctcaccaccaccaccaccaacCCGTCTACCTTCGCCGGCTGGTTCCACATCGGACGTTGAACAATTCGCTGGCAAAATTGTATACAATCCAGACGGATCTGCTTATATAATTGAAGATTCAGATGCGAGCGATGGCGAAAACCAGCAGCAACAGCCACCGATCCCCGAAAATGGTCCTCCTTTGCAGGCTGTTTACGTATCGCGAATGTTAAGACAACCGACTAGACCCTCTGAGCTTCCAGCGGTCCACAGTTATCGAGTGGTGGCATTGAGGGACGCCAGACCACCAAGGCCGGCCTCCCTACCGATCAAACCTATATTAATGTGTTTTGTGTGTAGGCTCTCGTTCGGATTTGCGCGTTCGTTTGCGAGCCACGCGAGCGCGGAACACGGGGTGACGTTACAGGATGCGGAACGTGAAATACTCGCCCAAGATTGTGGGGCGATTCTTCAATGTGTCGGAGCGGAAAAACGACCAGTCGTGTCCCTGTTGGAACCGCTCGGAAGTCCCGTCACTTCGGAACCCCAACTTGTCCAACAAACTTCAATAGCCAATGCGCAAACCTCTCAGCAACAGCAGTCCCAATCAGCTCCGGGAAAATCACCTAGTCCTCCGTTTGCTTCACCTCCCGCTTTCATGACAGGAACAACGATAGGTGTATGTCCTGAACATTTGCAAGGACGACCATCTGGAGTGGATTGTCAAAGATGCGAAATGATTCTGGCTTCGGGCCGTTTGGGACCTGCCGGTTTAGCGAATGTGCATAGCAGGAATTCTTGTAAAACCTTGAAATGTCCTAAATGCAATTGGCATTACAAGTATCAAGAAACTTTGGAGATTCATATGAAAGAAAAGCATCCCGAAGCTGAAACGAGTTGTATTTATTGTATAGCTGGTCAGCCACATCCTCGACTGGCGCGAGGCGAAACGTATACTTGCGGTTATAAACCGTACAGATGTGAGGTCTGCAACTACTCCACAACTACCAAAGGTAATCTGAGCATCCACATGCAATCGGATAagcatttaaataatatgcaAGAACTGCAGAATGGTGGAGGACCGAACGGTGAAGCACGACAAGCTTCTCCGAAAGCCCCATCACTGCACCATTCGCCAGTAAGTTCCGGacataaaccaaaaaataattttcgttgTAACGTGTGCAATTATGAGACAAACGTGGCCAGAAATTTAAGGATACACATGACCAGTGAAAAGCACACTCACAATATACTGGTTCTTCAACAGAACGTTAAGCATATGGAGACTTTAAGTGCATTGCATCATCAGCAGCATCCTCAACAACATATGGAAAGCCTTTATGGGATCTATCCGGGATTGGGAGATAAACCAGAAGCCGCCTTGGCTGACATGGCTTACAATCAAGCATTGCTCTTTCAAATGATGACTGGGGGTCAATTGCCCGGCCATGCCGGACCCGTTGACATGGCTGCCCATTCTGATATGGGACTGAACCCAGAAACTATGGAGCCACCTCCGGAACCAGCGGATCCCGATCCTGAAAAAACGTATCAGTGTTGCGTTTGTAATGTGTTCCAAACTGACTCCTTGGAAGACCTGGGGCGACACTTAGCATTAGATAGAACCAGACTGAGGGAACAAGAAATCCTGGCCGTGGTAGCTGGACACTACGTCTGCAAGCTATGCACGTACAAAACGAATCTCAAAGCGAATTTCCAGCTACACTGCAAGACTGATAAGCATCTCCAAAGGCTCCAGCACGTCAATCACGTGAAAGAAGGGGGTCCGCGGAACGAATGGAAACTGAAGTACGCTTCGGCACCCGGGGGTGTACAAATCAGGTGCAATGCGTGCGATTATTATACAAATTCCGCGCATAAATTGCAATTACATTCGGCGGCAGCACGTCACGATGCGGGCGTGGCGTTGCTCAAACATCTTCACGAACGTTGCTCGAACCTGCAAACAAACCAACCGAGAGTATTTCATTGTTCGTTGTGCGGATTTTCGGCTACGAATCGATTGCCGTTATTACAGCACGTCCGGTCATTGAAACATTTGCAAATGGAGCAACTTCATCAGCTCCAAAGGAGGGCGGAAGGCAAAGAAAACACTCCCGATATTGGAGAAGTGTTTCATGTAGTTCCAGGACCGCCAGATCAGAACCAACAACAAAGGCAAACACCTGAACGACGTGACAGCATCAACAGTGACCTTTCCCAAATTGACACACACAACGCCAATCCGATTTTGAAAACAGAGGCCAGTAATTGTGATCTGGACGAATTGGGCAACATGGACGCCACTTCTGGAACGCACATGTGTCCCTATTGTGAATATTCAAGCGAGAGTGAAATGCGAATTCAAGCTCACGTGCTTGCGCAACACGGACAAGAACAACAAGTCTTGCATTGTCCATTGTGCCaggatttatttaaagaacgAGCCAGTTTGGAACGGCATGTTATGCAAGTTCATTCAGTCAATAGCGAGGGTCTGCAACGATTACTAATATTGGTGGATCAAAGTCATTGGCTGAACCAAACTTCTAGAACGTCGACTCCGAATAATACCTCGGCTACTATAGTTCAAAACCAAATATCTCCTACTTCGGTGTCTTCAAGGGATTCTAGTAGTAAGTTGGAAATAACTGGAAACAGCGATGAAGCCGCCGTAGACTTGCTATCTCCAGGCAGTGACGATATTACTGAAAACGAGAGCGAAAGGTGCAATACttgtttgaaaacatttagaaaTGTTGACGAGCTTTGTCATCATCAAACTGAAACCGGTCATCAACTTGAGGTGAAACAAACCCCTAGCGGCCCAGGTTACGTTTGCTGGAAGAAGGGTTGCAATCAGTTTTTTCCTACCGCTCACACCCTTCAAATGCATTTCAAGGAAGTTCACGCAAAGAATTCTATTGCGAACATGTCAGTTAGCGAAAAACACGTCTACAAGTATCGTTGCAATCAGTGCTCATTGGCATTCAAAACTCtggaaaaattgcaattgcaTTCCCAGTACCATATGATCCGGGATGCAACCAAATGTGTACTATGCGGGCGAAGTTTTAGATCACTGGTGGCTCTCCATAAACACGTTGAAAGCGTTCATTCCGAGTTGACTGATGAAGAACTAAATGCTTACAAACAAAGCTTATTGACTAATCCACTCTTGTTGGCTGGACTTCAAGGACAAATTTTAGACAATTCGACTAACGACTTGCTCAAGAAAGAAACCCTTAGAGGTGAAGAAAGCGAAAGTCTTATGGAAGTTGATGAGAGCAAAGACCTAAGTGTGCAAGCGCTTGACGACAGCAACAGCAATCAAAATGACGGGGAAAATTCAGATGACAGTATTGTATATAAAGATCAGCAGTTCCTAGAAGACTACCTCAACAGTCAAGCAATGGCCGAGGATAGCTACAACGATCCCAATCGAAAATACAAATGTCATAGATGCAGAGTAGCATTTACGCGTCAAAGCTACCTCACGGCTCACAACAAGACTCTATTACATAGAAAAGGTGAAAAATTAACGTATCCCATGGAGAAATATTTGGATCCGAATCGTCCCTATAAATGCGACGTGTGCAAGGAGAGTTTTACACAAAAGAATATTCTGCTTGTCCATTACAATTCTGTAAGTCATTTACATAAATTGAAACGTGCCATGCAGGAACAACAAActaataacaacaacaattcaCCAGTCAGTCCCATTACTGGACCGTCTCAAGCGCAAAACTTGTCTTTGACCCCAAAAAGCTCTTCAACGGACGACGACGACAAGAAGAAATACCGATGTAATATTTGTAAAGTGGCCTACACGCAGGGCAGCACATTGGACATTCATATGCGTAGCGTGTTGCACCAAACGAGAGCCAGTAAATTGCAAGATTTGGCGATGGCCGGACAAATCGATCTGTCAAAGCCGTTAATCGAACAGCCCGACATCTTACAGTCTCCGAAACAACCCTCACCGAACCCTAGTGGAGGGGATGGCACGAAGCTACCCTGCCCCACCCCACCTAGTCCATCCGGTATACCATCAGGTAATCAAGGGATGAATTGTCCTAAATGCGGCTCTTCTTTTTCGACCCAAGATCAGTTGAGCGCGCACCAGCTTTACTGTTTGTTCGCCACTCCAATGTCAGTTGTTGGTGCGAACAACGATGATCGGCACGGTGGTGAATTCGAACTCGATGCACAATCAAAAGTCATGTCTGGTAAAAAAGGCTCACCTATCTACAAACATTTATTGGAAGGTTACGGATTCGATTTAGTGATGCAATACAACGAGAGCCATCAACGTAGACAGCGACAAGCAgccgaaaaagaaaaagccgAGGCCGAACAGAAATTGGCAGAAGAGCATTGCCACAACGACAACGATATTATCCCTGAAATTCTTCCTGAATTGAATGAATTACCTGAAGTAAAAGAAGAGAAGTGCGATGATGACAAACCAACTAGTGATAAAGAAGATGAAGTTGCAAGTGGAAGTTTACCAGAAGTGAGCAAATCGACGTGCCAAACCTGCAACAAGGAGTTTTCAAGTGTGTGGGTGCTGAAAAGCCATTGCGAGGAAGTGCATAAAGACTTAGTTCCATTagaatatttagaaaagtaCGCGCAACAACTGAAAAACGAAATCGAAAAGAAAACAGTAGTGGTCACTGCTGCCACAAGTTCCACGACCAATACAGTCACTCCAACCAGTCCTGAAACACCAGAAAAAGATGATGAAAGCAAAGAGACTTTACATGCGAAACTCAATTTGCAAACACCCCCTGAAGCTACATCAACGGCCCCAAGTACGCCAACAAGTAGCACCACTCCTGCAAGTTCTACAGATTCTTTACCGGCAAACATTCAAGCCATGTTGGCACAAACCATGGCTCAAAATCCAATGGCTTTGGCACAACAAATGTCCGAAATGCAAGCGGCATTAAATGTGATGCAATTACAACAATTGAACTTCAATCCCGTGATGCAAATGATGGGAATGGGATTACCGCTCGGACTCAATGCTTTGGCAGCAATGAATTTACAACCCCCTTTGGTACCTCTCATGATGCCGCCGCCACCTTACGACCCAATGGGACAGTTTTCAGGGCAGGACCAGCAGGCGATGTTAGCTAAGCAACAAGCGGCTATGTTGCAACAACAAGCTGTCGTCAATGCTGCCGCCGCCAATCAGAAACGAGCCCGGACTAGAATTACCGatgaacaattgaaaattttgcgTGCCCACTTCGACATCAACAACTCACCATCTGAAGATCAAATACATGAAATGGCCAATCAGAGCGGTTTACCGCCCAAAGTGATCAAACACTGGTTTCgaaatacattatttaaagaaagacAACGGAACAAGGACAGTCCCTATAACTTTAACAATCCTCCGTCGACCACTTTAAACTTGGAAGAATATGAGAAAACTGGAGAAGCTAAAGTTATGCCATTGAATAGTTCGTCAGGCAGTAGTAGCACTGAAGAAACGAACAAAAGTAAAGAATCTACTTCACCAGTTCAAACtgaagttaaaaaagaaattaaggAAGAACCAAATGATGAACAAGGACGAGCTGGGGACTTATCTGATGAAAAGCCGCATTTTTTCAATCCAAACTTGCAACCGCCTCAAAGTCCTGCTACCTCCGTTGCATCCACTGAAAGTATTAACGTCTCCTCGCAACCTACCACGCCAAATAATTTGTCGCTCACTTCCATTATTGCATCACAACTTGGAGATAGTCTTTCCACTAGCACTCCAACACTTAATATGACGCATCACGGTTTGACCAGTCCAATGTTACCTCCACCCAAGTTAAATCAACAGAACTTTCCCAATCCAAATAGTCTACAAGGAATGTTACCATTGTCTTCAAATCGTTGTCTTAGTCCGAACAGAGATTTTAGTACCAGCAGCCAGGGTTCAACTGGGTCTACTGGTAAACGCGCTAATCGAACAAGATTTACTGACTATCAAATCAAAGTGCTGcaagaatttttcgaaaataatgcGTATCCAAAAGATGATGATTTGGAATACCTTTCTAAATTGCTAAATCTGAGCCCTAGAGTGATTGTTGTGTGGTTTCAAAATGCGAGACAAAAGGCTAGAAAGGTGTATGAAAATCAGCCAGCTGTAGAACCGACTCCAGGAGTGGATGAATCAGGCACGAATCGATTTCAAAGAACACCAGGACTGAATTATCaatgcaaaaaatgtttgttagtATTCCAACGATATTACGAACTAATTCGACATCAGAAGACTCACTGTTTTAAAGAGGAAGATGCAAAACGAAGCGCACAAGCGCAAGCGGCTGCTGCCCAAATAGCAGCGGTTCTAAGTTCTGAGGACTCTAATTCCAGCACTACAGTTGAACAAAATCAACAACTTCAAGGACAACAACAGAGCTTAATTACTACTCCAAGCAGTTCCAATCAGGCAATGAGTCCTGGACAACCGAACGCCTCGACTACACCCACTCCAAGTCAGGGAAATTTTCCTAGCTCATCACCTACCCCCTCTGAAGCAAAGGAAGGTACTTTTCAATGTGACAAATGCAATCTGGTATTTCCTCGGTTTGAACTCTGGCGAGAACATCAACTAGTTCATTTGATGAACCCAAATTTATTTCCAACATACCCTCCAGATAGTCCTTTCGGCATTTTGCAACAACATGCACAATTACAGCAACAGTTGGGAGAAGTTGCCAAGCAGGGTAACTCATTACCTCATACCTCCAATGTGCCCCATCCCTTGATCAACATGTTGAACAACGTAACtggacaaaaaagaaaattgaagagtTTGGTGACGTGGAAAGTGACGCTTCAGATCAGCCCAAAGACAAACGGCTGCGCACAACCATCTTACCAGAACAGCTAG
Protein Sequence
MPTSSTAPEPTTRPDAAIMSPEQEASPPPAAPGASPPPPPTRLPSPAGSTSDVEQFAGKIVYNPDGSAYIIEDSDASDGENQQQQPPIPENGPPLQAVYVSRMLRQPTRPSELPAVHSYRVVALRDARPPRPASLPIKPILMCFVCRLSFGFARSFASHASAEHGVTLQDAEREILAQDCGAILQCVGAEKRPVVSLLEPLGSPVTSEPQLVQQTSIANAQTSQQQQSQSAPGKSPSPPFASPPAFMTGTTIGVCPEHLQGRPSGVDCQRCEMILASGRLGPAGLANVHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPEAETSCIYCIAGQPHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQNGGGPNGEARQASPKAPSLHHSPVSSGHKPKNNFRCNVCNYETNVARNLRIHMTSEKHTHNILVLQQNVKHMETLSALHHQQHPQQHMESLYGIYPGLGDKPEAALADMAYNQALLFQMMTGGQLPGHAGPVDMAAHSDMGLNPETMEPPPEPADPDPEKTYQCCVCNVFQTDSLEDLGRHLALDRTRLREQEILAVVAGHYVCKLCTYKTNLKANFQLHCKTDKHLQRLQHVNHVKEGGPRNEWKLKYASAPGGVQIRCNACDYYTNSAHKLQLHSAAARHDAGVALLKHLHERCSNLQTNQPRVFHCSLCGFSATNRLPLLQHVRSLKHLQMEQLHQLQRRAEGKENTPDIGEVFHVVPGPPDQNQQQRQTPERRDSINSDLSQIDTHNANPILKTEASNCDLDELGNMDATSGTHMCPYCEYSSESEMRIQAHVLAQHGQEQQVLHCPLCQDLFKERASLERHVMQVHSVNSEGLQRLLILVDQSHWLNQTSRTSTPNNTSATIVQNQISPTSVSSRDSSSKLEITGNSDEAAVDLLSPGSDDITENESERCNTCLKTFRNVDELCHHQTETGHQLEVKQTPSGPGYVCWKKGCNQFFPTAHTLQMHFKEVHAKNSIANMSVSEKHVYKYRCNQCSLAFKTLEKLQLHSQYHMIRDATKCVLCGRSFRSLVALHKHVESVHSELTDEELNAYKQSLLTNPLLLAGLQGQILDNSTNDLLKKETLRGEESESLMEVDESKDLSVQALDDSNSNQNDGENSDDSIVYKDQQFLEDYLNSQAMAEDSYNDPNRKYKCHRCRVAFTRQSYLTAHNKTLLHRKGEKLTYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQTNNNNNSPVSPITGPSQAQNLSLTPKSSSTDDDDKKKYRCNICKVAYTQGSTLDIHMRSVLHQTRASKLQDLAMAGQIDLSKPLIEQPDILQSPKQPSPNPSGGDGTKLPCPTPPSPSGIPSGNQGMNCPKCGSSFSTQDQLSAHQLYCLFATPMSVVGANNDDRHGGEFELDAQSKVMSGKKGSPIYKHLLEGYGFDLVMQYNESHQRRQRQAAEKEKAEAEQKLAEEHCHNDNDIIPEILPELNELPEVKEEKCDDDKPTSDKEDEVASGSLPEVSKSTCQTCNKEFSSVWVLKSHCEEVHKDLVPLEYLEKYAQQLKNEIEKKTVVVTAATSSTTNTVTPTSPETPEKDDESKETLHAKLNLQTPPEATSTAPSTPTSSTTPASSTDSLPANIQAMLAQTMAQNPMALAQQMSEMQAALNVMQLQQLNFNPVMQMMGMGLPLGLNALAAMNLQPPLVPLMMPPPPYDPMGQFSGQDQQAMLAKQQAAMLQQQAVVNAAAANQKRARTRITDEQLKILRAHFDINNSPSEDQIHEMANQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVMPLNSSSGSSSTEETNKSKESTSPVQTEVKKEIKEEPNDEQGRAGDLSDEKPHFFNPNLQPPQSPATSVASTESINVSSQPTTPNNLSLTSIIASQLGDSLSTSTPTLNMTHHGLTSPMLPPPKLNQQNFPNPNSLQGMLPLSSNRCLSPNRDFSTSSQGSTGSTGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLNLSPRVIVVWFQNARQKARKVYENQPAVEPTPGVDESGTNRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQIAAVLSSEDSNSSTTVEQNQQLQGQQQSLITTPSSSNQAMSPGQPNASTTPTPSQGNFPSSSPTPSEAKEGTFQCDKCNLVFPRFELWREHQLVHLMNPNLFPTYPPDSPFGILQQHAQLQQQLGEVAKQGNSLPHTSNVPHPLINMLNNVTGQKRKLKSLVTWKVTLQISPKTNGCAQPSYQNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00830063;
90% Identity
iTF_00830063;
80% Identity
iTF_00830063;