Basic Information

Insect: Hypothenemus hampei
Gene Symbol: ken
Assembly: GCA_013372445.1
Location: JABRWK010000007.1:439431-441474[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.1 90 3.8 0.6 3 23 29 46 28 46 0.79

2 16 4.5 3.8e+02 1.8 3.8 1 23 49 72 49 72 0.92

3 16 0.0018 0.15 12.5 0.3 1 23 79 101 79 101 0.95

4 16 0.31 26 5.5 6.2 1 23 105 129 105 129 0.95

5 16 0.0054 0.46 11.0 0.8 1 23 135 157 135 157 0.97

6 16 0.00058 0.05 14.0 1.1 1 23 163 186 163 186 0.93

7 16 1.1e-06 9.4e-05 22.6 0.3 1 23 197 220 197 220 0.94

8 16 2.8e-06 0.00024 21.3 2.3 3 23 230 250 229 250 0.98

9 16 1.4e-05 0.0012 19.1 1.6 1 23 256 278 256 278 0.96

10 16 0.00015 0.013 15.9 2.7 1 23 402 424 402 424 0.98

11 16 0.00084 0.071 13.6 0.8 1 20 428 447 428 449 0.94

12 16 0.00017 0.015 15.7 0.6 2 23 457 478 456 478 0.95

13 16 7e-05 0.0059 17.0 4.7 1 23 484 507 484 507 0.97

14 16 6.1e-06 0.00052 20.3 1.6 1 23 518 541 518 541 0.98

15 16 8.9e-07 7.6e-05 22.9 0.4 1 23 549 571 549 571 0.98

16 16 7.5e-05 0.0064 16.8 0.8 1 23 577 600 577 600 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.1	90	3.8	0.6	3	23	29	46	28	46	0.79
2	16	4.5	3.8e+02	1.8	3.8	1	23	49	72	49	72	0.92
3	16	0.0018	0.15	12.5	0.3	1	23	79	101	79	101	0.95
4	16	0.31	26	5.5	6.2	1	23	105	129	105	129	0.95
5	16	0.0054	0.46	11.0	0.8	1	23	135	157	135	157	0.97
6	16	0.00058	0.05	14.0	1.1	1	23	163	186	163	186	0.93
7	16	1.1e-06	9.4e-05	22.6	0.3	1	23	197	220	197	220	0.94
8	16	2.8e-06	0.00024	21.3	2.3	3	23	230	250	229	250	0.98
9	16	1.4e-05	0.0012	19.1	1.6	1	23	256	278	256	278	0.96
10	16	0.00015	0.013	15.9	2.7	1	23	402	424	402	424	0.98
11	16	0.00084	0.071	13.6	0.8	1	20	428	447	428	449	0.94
12	16	0.00017	0.015	15.7	0.6	2	23	457	478	456	478	0.95
13	16	7e-05	0.0059	17.0	4.7	1	23	484	507	484	507	0.97
14	16	6.1e-06	0.00052	20.3	1.6	1	23	518	541	518	541	0.98
15	16	8.9e-07	7.6e-05	22.9	0.4	1	23	549	571	549	571	0.98
16	16	7.5e-05	0.0064	16.8	0.8	1	23	577	600	577	600	0.96

Sequence Information

Coding Sequence: ATGGATGACACTAATTTGGACCTTTTGGCTAACAACCTTGAATTGGATTCAGAATCAGAAAGTTCTTCGCAAAATAAACGTCCCTGTAACCATTGCGGAATTCCCTACAAACTCTTGGGCCGTCATCTTGAGACCCATGGTCCTCATAATTGTTTGGAGTGTCTTCTCCATTTTCCCACTGAACGGGAGTATAAGGAACATGCATGTCAAGTACACAACCAAAAGGAAATTGCTTATATTTGCGAGATATGCAACCAGGGATTCTTTTCTCCAACTCAATTGGCTTTACATAATTACAAACATACAGAAAAGTATTGCTGTCCTCATTGCGATTTTGTTACCCGAGGAAAACATAAACAGTCATTGATCAACCATATTAAGAGACACGAGGGACAATTCTCCTATTTTTGCGATATTTGCGGCCAAGGCTTTCTAGCGAAACACACCCTTTCATCTCATATGGAAATGCACGAGGATATTCCAAAATATGAGTGTGAGGTGTGCCAGAAAAAATTCACTGTTAAAAGgTACCTCGATGTTCATAAATCTCTCAATCACAAGCTAGAACTGTATggaattgaagaaatatatCAATGTGAAATTTGTGGACGCAGCTTTACGTTtgagaaaagtttaataagaCATCTCAGTGCTATTCATAAAAGAGGTGAAGATCGCACAGTGGATTGCCCGATatgcaaaaagaaaatcgcCAATAAGCATAATTTGAAGAAACACATGCGTGTTCATACGGGagaaaaacagttttgttGCGACCTGTGTGGCAAAGCATTTGCTGAGAAGAAGTATCTGCAGAAACATCAGGTGGTACATGACAGGGAAAAGGATGATAAGAACACgaatactaaaaaatttattttatccgATGATGAGAACGAAGAAGATGTTGAAAGCTATTTACTCTTGGCTGATGAAGAGAATAAAGATGTTGTAGCCAAAGTTTTAGAACCCCAGCTgtatttggtaaaaaatgaaaaaggttTACAAGTCATCTTTGGGTCAGTGACTACAAAATCTCAACAGGTCTCGAAAACCTCAAATCTTTGTGCCATTTGTGGAAAACTAGTCGACAATATTAAGAGACACAGACACAGAAGTGCTTTCTCTTGTAACTCTTGCTTtatccatttgaaaaatcaaaaagaccATGAAGAGCACATGCAGCTACACGAATCGGATCATTATAAATGCGATCAATGTCcaagaattttcaaaactctTACCGAACTGTCTGTGCATCATTACAAACATACTAACCGATACGAGTGTCCCAAGTGCGGTCGGCAATTGAAAACTTGTCGAGGACTGAAAAATCACGTGGCAAAAGAAGAATCTGTTTTTAGACTTCATTGTGACATATGTGGCGAAGGTTTCAACGTACCATGTGAACTTCAAAGGCATTTAGAGCTTCACGATAATGATAAAAAGTACAAATGTCACTTGTGCTCGAAGCGattcaatttgaaagtttatttgcAAAATCATCAAAGACTCAACCATAAAATGGAGATTTACGGTATTGAACAAGTGTTTCAATGCGAGTATTGTTCGaggattttttcatttgaaaaatcgcTAAAAAGGCATTTAAACATGGTACATCAAATTGGAGAAGTTAAGCgatttgaatgtaaaatttgtcaaaaagttGTAACTACTTCTTATGGTTTAACTGTGCATATGAGGCTGCACACCGGAGAGAAAAAGTATGATTGTAAAGTTTGTGGCAAGAAATTCCCCAAAAAGCAATACGCAGTTAGACATATGGCATCTAAGCACTCAAGAACGAAGGATTAG
Protein Sequence: MDDTNLDLLANNLELDSESESSSQNKRPCNHCGIPYKLLGRHLETHGPHNCLECLLHFPTEREYKEHACQVHNQKEIAYICEICNQGFFSPTQLALHNYKHTEKYCCPHCDFVTRGKHKQSLINHIKRHEGQFSYFCDICGQGFLAKHTLSSHMEMHEDIPKYECEVCQKKFTVKRYLDVHKSLNHKLELYGIEEIYQCEICGRSFTFEKSLIRHLSAIHKRGEDRTVDCPICKKKIANKHNLKKHMRVHTGEKQFCCDLCGKAFAEKKYLQKHQVVHDREKDDKNTNTKKFILSDDENEEDVESYLLLADEENKDVVAKVLEPQLYLVKNEKGLQVIFGSVTTKSQQVSKTSNLCAICGKLVDNIKRHRHRSAFSCNSCFIHLKNQKDHEEHMQLHESDHYKCDQCPRIFKTLTELSVHHYKHTNRYECPKCGRQLKTCRGLKNHVAKEESVFRLHCDICGEGFNVPCELQRHLELHDNDKKYKCHLCSKRFNLKVYLQNHQRLNHKMEIYGIEQVFQCEYCSRIFSFEKSLKRHLNMVHQIGEVKRFECKICQKVVTTSYGLTVHMRLHTGEKKYDCKVCGKKFPKKQYAVRHMASKHSRTKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -