Basic Information

Insect: Hypothenemus hampei
Gene Symbol: ZBTB41
Assembly: GCA_013372445.1
Location: JABRWK010000001.1:1991539-1993736[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.5e-06 0.0003 21.0 1.6 1 23 165 188 165 189 0.96

2 12 0.00016 0.014 15.8 0.4 1 23 224 247 224 247 0.96

3 12 2.7e-05 0.0023 18.2 2.3 1 23 253 275 253 275 0.98

4 12 2.8e-06 0.00023 21.4 0.4 2 20 281 299 280 301 0.95

5 12 1.1e-07 9.6e-06 25.7 0.8 1 23 312 334 312 334 0.98

6 12 0.00048 0.041 14.3 0.3 1 23 345 367 345 367 0.99

7 12 3e-05 0.0025 18.1 0.3 1 23 373 395 373 395 0.98

8 12 4.8e-06 0.00041 20.6 0.4 1 23 401 423 401 423 0.99

9 12 7.4e-06 0.00063 20.0 3.3 1 23 429 451 429 451 0.96

10 12 6.3e-05 0.0054 17.1 2.8 1 23 457 480 457 480 0.95

11 12 3.8e-05 0.0032 17.8 0.8 2 23 487 510 486 510 0.95

12 12 3e-08 2.5e-06 27.6 0.3 1 23 516 538 516 538 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.5e-06	0.0003	21.0	1.6	1	23	165	188	165	189	0.96
2	12	0.00016	0.014	15.8	0.4	1	23	224	247	224	247	0.96
3	12	2.7e-05	0.0023	18.2	2.3	1	23	253	275	253	275	0.98
4	12	2.8e-06	0.00023	21.4	0.4	2	20	281	299	280	301	0.95
5	12	1.1e-07	9.6e-06	25.7	0.8	1	23	312	334	312	334	0.98
6	12	0.00048	0.041	14.3	0.3	1	23	345	367	345	367	0.99
7	12	3e-05	0.0025	18.1	0.3	1	23	373	395	373	395	0.98
8	12	4.8e-06	0.00041	20.6	0.4	1	23	401	423	401	423	0.99
9	12	7.4e-06	0.00063	20.0	3.3	1	23	429	451	429	451	0.96
10	12	6.3e-05	0.0054	17.1	2.8	1	23	457	480	457	480	0.95
11	12	3.8e-05	0.0032	17.8	0.8	2	23	487	510	486	510	0.95
12	12	3e-08	2.5e-06	27.6	0.3	1	23	516	538	516	538	0.98

Sequence Information

Coding Sequence: ATGGACATAACTCCcgatataaaaaatgaactgaCCGATGAAAGTTTCGTAAAAGTCGAAGGGACACCTGAAGAAGTCAACGAATACACTCAGGTGCAAAATCAATCAGTAAACCATAATAACGTTCCTAATTTAATGCAAACTGTAAACAACAATGGAAATGTGGAATTGGTGGAATTGGAAAGTGGACAATACACTTATATCCTCAATGAGGACTCAGAGAAGCTAGAAAAGACCTCACGCTTTGATCTTGATGATGGggaacattattttattgaggAATATGAGGGGGATGAagttgaagaagaagaaccaCCCCAATATGAAACTGTATATATTGAGTCAGCAGCTGAATCGCCTTATGAGGAGGGAAATGAAGTTTATACCATTTCTGAGGAAATTGAAGATGAAGACGAAGAAGTAGCTGAAAAAAGTaaagataaattgaaaattgatgaTCAGAAGCAAAATGAACAAGACGTAGAAGTGATCTATGAATGTAGCATTTGtagtaaaaactttaaaactccCTCAGGTGTAAAGAGACATATTAGTATGAACCACCACGCTAAAAACAATGTGGAAAAAGTTGAAGTCAAAGATGAGTTGTCATTTTCTTTGTGTCCTTGTTGTGGGGAGCCTTCGGATTCCGCCCATACAacaggaaatttcaaatgtgaggaatgtgaaaaattatttatttttccaaatgcaCTGAAAAGACACAAAAGCATTGATCATCCCACAGGGGGAAGATTTACATGTTACGAATGTAAAAAGGAGTTTTCCACAAAAGAGTTTTTAATCGATCATACGAAAATGCATTCATTAAAAGCGGTCAAATGTGAGGATTGCGGACGTGAATTTAGTAGAAAATATCACTTGGACAGGCATATTGTTCAGACGGGCTGTATGGGAGTGATGAAACAAGTATATGAATGTCGCgtCTGTCAGAAGTCATTTACCCGAAAAGACAACTTAGCCGAACACTTGAAAGTTCATGCGGGTATTTTGCATAAGAAAAAGCGTCAGTACACATGCGAATTTTGTATGAAAGAGTTCAGCGGACTAGCTTTATTGCAAATTCATGTTCGAACCCATACAGGTGAACGACCATATCCATGtgatatttgtgaaaaaaagtttccttcTGGGGGCGCTATGAAAAAACATCGTCGAAAACATACTGGGGAACGACCATATACATGTCCTCAGtgTGGAAGTAAATTTGCTGCCAAAGAGACATTAAATCGTCATTGGCGAACGCATACCGGAGAGAAACCGCACCAATGTAAGTTTTGCGGCAAATCTTTTATTCAGGCCGTCCAATTGAGGGCTCACATCTTCCACCATACTGGCGAGAATGCCTTCGTTTGTCCACATTGTAATCGAGCGTTTAATCGCAAATTACGTCTTACTactcatataaaatttatgcaCGAAGGAGCCGCACCATTGCCCTGTCCGAAAACagattgtaaaaaaacatttttccgtAAAGAGGACATTCAAAGACATCTTTTAACGCACAGCGGTCAAAAACCTTATGTATGTGAAATTTGTGACAAATCGTTTACGGTTAAATCTTCCTTGAGGGTCCaccaaaatattcataaaaagaaATGCCAGTGGCCTGTGAGGTATGCAACCGGgcatttattagaaaagatTGTTTGA
Protein Sequence: MDITPDIKNELTDESFVKVEGTPEEVNEYTQVQNQSVNHNNVPNLMQTVNNNGNVELVELESGQYTYILNEDSEKLEKTSRFDLDDGEHYFIEEYEGDEVEEEEPPQYETVYIESAAESPYEEGNEVYTISEEIEDEDEEVAEKSKDKLKIDDQKQNEQDVEVIYECSICSKNFKTPSGVKRHISMNHHAKNNVEKVEVKDELSFSLCPCCGEPSDSAHTTGNFKCEECEKLFIFPNALKRHKSIDHPTGGRFTCYECKKEFSTKEFLIDHTKMHSLKAVKCEDCGREFSRKYHLDRHIVQTGCMGVMKQVYECRVCQKSFTRKDNLAEHLKVHAGILHKKKRQYTCEFCMKEFSGLALLQIHVRTHTGERPYPCDICEKKFPSGGAMKKHRRKHTGERPYTCPQCGSKFAAKETLNRHWRTHTGEKPHQCKFCGKSFIQAVQLRAHIFHHTGENAFVCPHCNRAFNRKLRLTTHIKFMHEGAAPLPCPKTDCKKTFFRKEDIQRHLLTHSGQKPYVCEICDKSFTVKSSLRVHQNIHKKKCQWPVRYATGHLLEKIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -