Hham012139.1
Basic Information
- Insect
- Hypothenemus hampei
- Gene Symbol
- CSRNP3
- Assembly
- GCA_013372445.1
- Location
- JABRWK010000009.1:607442-610725[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.33 5.8e+03 -3.1 1.2 64 106 8 50 5 60 0.57 2 2 2.1e-103 3.6e-99 331.0 9.2 1 218 147 356 147 356 0.93
Sequence Information
- Coding Sequence
- atgtGTGATATCGATTTGGAGAAGAAGGAGAAGGAAAGTGCATGCCAGAAAGACGAAGAGGTGACAAGTTTAAACGATGGGGAAGATTCAACTACTGAAAGTCTTACGGCGACCGAAGAGCTTATCGAGGAACCCCACGATAGATCTGATGGTTCTGATTCCGGGTTAGGATCGGAAATTTTGGAAGAACGCGCCGATATGCCTCAGACGAATAATTTCGGGGAGAGCGACAGCGAAACCACTTTtgATCGTTTAAATGAAGATCATTCAACATCAAATTCAACGTCAATATCAGCGCATCCAGGCGAAGAAACTGGAACCGGACCACCATTTCCTCTTCTTACCGCATTGGTGACCAATCTGAAGAAAGTGCCTATAAAGAGCAGtctcaaaagaaaattgcGAATGGATGATGAAGAGGGCACTGCGCCGAAAGTTAAGAAAAAACGCGGTATCACTTTCGATAGCGTcacagttttttattttccgagAGCGCAAGGATTCACTTGCGTACCATCACAAGGAGGTTCCACTTTGGGTATGAGCTCCCATCACTCTCAAATGAAAAAGTTCTCTATGGTGGAACACGCAAACGAGCAACGTAGAATACATCGACAACTTCTTCAACAACTCAAaacTGAACGAAACGTTGGCAATGGGGTCTCTGGATCCTCGAGTGACGATAGCGACAGCGAAGACGAAATTAGTGACGCCTCGGAATCGGAATTGGATCTGgacaattattatttcctGCAACCGGTGCCGACTAGACAAAGACGCGCTCTTTTGAGAGCAGCGGGAGTACGAAAGATCGATTCGCTTGAAAAAGACGAATGTCGCACCATTAGAACTTCCCGCGAATTTTGCGGTTGCGGCTGTAAAGGTTATTGCGATCCAGACACATGTTCGTGCAGTCAAGCAGGAATCAAATGTCAGGTAGACAGGTTGAACTTTCCTTGCGGCTGCACTAGAGAAAATTGCGGCAATTCATCAGGAAGAATCGAATTTAATCCAGTCAGAGTGCGCACACACTTCATTCACACTCTTATGCGATTAGAATTGGAAAAGAAACAAGATGACATGCAGGAAAAGAAAGATTTTTCCTGGATGACCAACGAGAGACTGGCAGTTCAAAATTATCACAAAGAGGACCATTGTAAATTAGATGTAAATAAATGTAGCGATAATTTAGTTAAAGACATGAACTTGAGTGGGCACGTTGAAGTTGAAAATTGTGTACATACCGGCAGTTTTACCAATTTGCATTATGGAGTGCCCGGTGAAGGGCCTGGAACATCCACGCAAAACTCTGCGACATCTTTTCCTGAACTTCCTGCCAGAGAAGATTCTCTAGACCTTTATACGTTTAGAGAAAATTGTTATACTGCTGAAAATGAACGGAAACAACAACAGCAATCCCCATTTACGTCTTCGAGTTCGAACGCTGGCGGCCACCAGGGATTCTCCTTCGATCCACGTTTCGCTGCTGAGATGCAGTCGACGTTCGTCGTGACGCCACCTAGTTCCAGCGTAAACGGCGTCGGCGTCACCCCATCTACCACCTCTGGTCCCTGTTTTGTTCCCGTTACAGCACCACCCCCAGGTCCAGTGGTGAATCAATATGCGCAATTTCATTCGGCTGGATTCGGCGATTTCGCGAGTAACAACCCCgccaataatattttcaatcattaTTCGGGCATTTACGaaaattttcaacagcAACATCAACAAAATCAATCTTCAGCAGGATTTGAATTCGCCAACGAAAGTTACCCGTCAGAATCAAAAGAAAGCCAATACACGAACCTGAACACAGTCGGGGCCAATTCAAAATTAGAATCGTTTTGCGATCATCTTCTGTTAAATAATCGCTACAACTATGCTGGTTACGAGGAATCAAATAGTTACAGTGTATTAAGTACTGACGAGGCCACTCAGGATGGTACCGAGACGACGGAAATGGTATCGGTGATCAACGAGGACAACGGTACCACCATTGGAAACGGCTTAAGGGAGTGTGACGAAAATTTCggtgaaattattaaaaaatcaattgtagAAACGGTTTCCGCTTAA
- Protein Sequence
- MCDIDLEKKEKESACQKDEEVTSLNDGEDSTTESLTATEELIEEPHDRSDGSDSGLGSEILEERADMPQTNNFGESDSETTFDRLNEDHSTSNSTSISAHPGEETGTGPPFPLLTALVTNLKKVPIKSSLKRKLRMDDEEGTAPKVKKKRGITFDSVTVFYFPRAQGFTCVPSQGGSTLGMSSHHSQMKKFSMVEHANEQRRIHRQLLQQLKTERNVGNGVSGSSSDDSDSEDEISDASESELDLDNYYFLQPVPTRQRRALLRAAGVRKIDSLEKDECRTIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCTRENCGNSSGRIEFNPVRVRTHFIHTLMRLELEKKQDDMQEKKDFSWMTNERLAVQNYHKEDHCKLDVNKCSDNLVKDMNLSGHVEVENCVHTGSFTNLHYGVPGEGPGTSTQNSATSFPELPAREDSLDLYTFRENCYTAENERKQQQQSPFTSSSSNAGGHQGFSFDPRFAAEMQSTFVVTPPSSSVNGVGVTPSTTSGPCFVPVTAPPPGPVVNQYAQFHSAGFGDFASNNPANNIFNHYSGIYENFQQQHQQNQSSAGFEFANESYPSESKESQYTNLNTVGANSKLESFCDHLLLNNRYNYAGYEESNSYSVLSTDEATQDGTETTEMVSVINEDNGTTIGNGLRECDENFGEIIKKSIVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -