Hham012414.1
Basic Information
- Insect
- Hypothenemus hampei
- Gene Symbol
- Mblk-1
- Assembly
- GCA_013372445.1
- Location
- JABRWK010000003.1:2135780-2154153[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-17 1.3e-14 53.6 0.0 1 44 396 440 396 441 0.94 2 2 7e-18 1.9e-15 56.2 0.0 1 43 779 822 779 824 0.95
Sequence Information
- Coding Sequence
- ATGCCGTTAGACGACGGCGACGCTCGGGTCGACGCCGCCGTCACTTTTTGCCGCTTCACGTTGACGACGATCAGAATTAGGCCGCGCATATGCAGTCCTGACCTACCCGACAGTCGGTGCGGTGTTAAAACCCGAGGCGGTGGCGTAGCCCTGACACGGGCTCCACAAAGGgccttaatatattttttcgtaacagtagGGTTGGAACGCATCGCTGAAGAGTTGATGGGTCGAAGGAAATGGAAAATCTACCAAGAATCCATGTCAAGAAGTTATTTGCAACCGTTGAACAACAATATCAAACGTACAAACAATCCATTGTCAGACGAAGACTGTTTTCAACGTTCTCAAAAAGAGAACAACCATCCGATAAGTATTCGGAAATCGAAGGAGATCGAGGAAGGAGAAGGGGACGACGAGGACAGTGTTGCCCGAGCGTCAGTCAGAAGCAAGGCAACGGTGCCGGCAACGGTTGGGGACGACGACGGCGCCGACGCGGTCAATCGACGACTGCGCAACGACGTCGACGAGCTCGACTGGAAACCGCAAGCAAAGTGCTGCTTCTGCGCAGACGGAGACATCAAACTGGATAGTGATCACGCAGTTCACCACGGGGAACCGAGTCCCCGCCCATCGGACTCGGATTCTTCAGATAGCGGCGGTCGAAGCGGAGACGAAGCGGACGGCCGTTCGCACTCCTCGCCCACACCACCGCCGCCACCCCATAGACTTTCCTCGGCCGCCCATTTAGCCGGCCTGCCGCCCAACATGAGTTCCGTGGACGTTGCTTTGGCGGTGGCTGCCCTAGCAGGCGGCACGCCGCCCGCAGTGCCGCCCGGAGCGCCTCCAATACCATTTTACGCGCCCACGATGATCACCCACAACTGGTATTTTGCCAATGTGGCTCGGCAATTTCAGAACGTTGCCACGTCCACGCCCCAGGAGGTGGCCGTGGAAAAAAGCGGCAACGGTGGTGGAGGTAGTGGTGGTGGTGGCGTTGGGGAACAGCCCTTGGACCTTAGTAAGGGATCGAGTAACGCTTCAAATAGTTCACCCGAACCTAAATCGGTTATAACAGGAGGCAATAATATTAGGATGCCCTCTATAGATGCTgccaaacaaattttcagTTCGGATTTTAGAGCGAAACCGAGAATGTCCGCGGTAGCGGGTCGTCGCACCTACACCGAAGATGAACTCCAGGCTGCCCTGAGGGACATCCAATCGGGAAAATTGGGAACGCGTCGCGCGGCCGTTATATACGGCATCCCCAGGTCGACTTTAAGAAACAAAGTGTACAAACTCGCTCTGGAAAGGGAACGTGAATCGCATCTGTCCAGTTCGACTGCGTTGAAACTGGACGAGGACGAAATATTGGACGATGACAAGGAGTTGAGTGGTACGGAGGAGGAAAAGGAAGTTGAAAAAGCTTTGCAGGCTCCCTTGCTTTCTATGGCTGACATTTTGAGGTTTTCCGGTATGGAGCATCCACCTGAGGCCATTAAATTGTTCCTGCAAAAAGTGAAAGAGAGCCAAGAGGCCGGATCGTCGCCTCTGGATCAGAGCGAAGTGGTCCAGTATCTCCAGgtCTATTTACAGGCTTTGATCGCCTCGCAGAACATCCTGGCCAATCAGCAGCAAAAGCCACCGGACGGTTCAGTATTAAATCACATCATTCCGGAACTGGCAAAAAGATTAATTGTCGAGGAACATTTGAAAATGCAGAACAACAATGGCGATAGCGAGAGACTGTCCAGATCTAGTCCGTCTAATTCGGTCATCACAAAGGTGGAGAAATCATCGCCGATCAAATCCGAACCGGAACCGATAGAATCGCCTTCAAATGTGATACTGAAAATTCCGTCCTACAGAGCGACGACCACCATTCCCACGACCAGTACGTCGGCAATCAGTAAAAATGGCGGTTGTGGTGATATATTTAGTCGTAGCAACTCGCTCGATTCCACGTCGAGTCGATTGGTGTCGCCGCCAATGGCGGGCGATTCTAACTCGCCACCCATTCTGCCCGGGAAGGGACTTTTAATCAAAGACGTCATCGCCCAGAAGTTTCAGCAAAGTCTGGATGTGCCACTAAGACGACCGCCCGTAGGCTTGGATTTGGATTTCAAGCGAAGCGGCTACACACCACCATTAGGCGCCAGTTTATCCTCTGTGGTCAAACAGGAGGCCAGTAGTAGacagcagcagcaacagcagcaggTGTTTCAACAACAGCCAGGCCAGCATCATCAGACGAAACCGCAGAATTCTGGAGGTGGACAACCTTCTGGAGGCAAAGgGACTCGTCCGAAGCGTGGAAAATATCGGAATTATGACAGAGACAGTTTGGTGGAAGCTGTTAGGGCTGTGCAACGTGGAGAAATGTCAGTTCATAGAGCTGGCAGCTACTATGGAGTGCCCCATAGCACATTAGAATATAAAGTGAAAGAGAGGCATTTAATGAGACCAAGGAAACGGGACCCGAAACCCAATCCTGTAGATGAAAAAATAGCTAGTCTGAAACAAAATGACCTGAAAATCGCCCAAGAAAAGTTGAAGCAacagcaacagcaacaacaacaacaacaacagcaaaaCGTGATGACTAAGCCGTCACAACAGAAATTCCCTTCCACTTCTCCGAATGGAATTAAATTGCCCCTATTTGAAGCTGCAGCAGCGGCAGGTCTAAGTCCAGCTGCGGCCGCAGGTTTGGCCCCGGGAAACTATCATCCACCATTTCCATTTTGGCCACATCCAGGTTTTCCCCCGAATCCCATGGCGGCTCCATTTTTATCGCCGAGCGAGTTTTTCGCTTCCCAAATGATGCAAAAATTGCAGGAGGAACGGGAAAAGACCATTGGATCTGGATCACCTCAAGGTGGAGTCGCCACCTTGGCTAAAAGCGCTAGACAGATGGCTGAATCGCTGCTCGACGGCTCGGCGCACAACGGATCATTTCTTGATGGCATCATCCGATCGAGTTTGGAATCTGGAGTTCCGGGAGCCGATGACAACAAACTTtcgaaagaagaaaacaatattgcTCCCGAAAATATGTCGAATAAAGCCTTGTTGGATCAGTTGTGCCGCAACAGTCGTTTGACGCCCCTTCCCAAACCGGATCCAAATAGTTCGGGGGACGAGTCTTACAGGAAAAGTTCGAGTCCCCTGAATTTCTCCACAGgtttaaaCAATTCACACGTTCAAGATGACACCACTACGACCTCGTTTCAACAACAGAAACGGTCTGGATCGCCATCGAACAAAGATAAAACACTACTCAACTCGGACGCCACTGTTGCGGTCGATTTGTCGAACGACTCGGCCGAGTCGAGTGCGAGTACGACAATGTTGGAGCGCAAGAGAAGCCGCGACGAGACAACAACGGACGCGACAACGGTCACAGAACCGGCCACCGAACGGAAACAGCCGAGAATTTATTTGAAGCCGGACCTGGTGAAACCGGAAAATTTGAAGCCGGAAATGCTGGTACGATTCCGGGATCTTTTAACCGAAAGAAATGGGTCCGGTTTAACGTTAACCGAAACGGTGACGGGATGTAGCAGCAGCAGTGCCTCAGAACCGGAAGCGCCCCAAGACTGA
- Protein Sequence
- MPLDDGDARVDAAVTFCRFTLTTIRIRPRICSPDLPDSRCGVKTRGGGVALTRAPQRALIYFFVTVGLERIAEELMGRRKWKIYQESMSRSYLQPLNNNIKRTNNPLSDEDCFQRSQKENNHPISIRKSKEIEEGEGDDEDSVARASVRSKATVPATVGDDDGADAVNRRLRNDVDELDWKPQAKCCFCADGDIKLDSDHAVHHGEPSPRPSDSDSSDSGGRSGDEADGRSHSSPTPPPPPHRLSSAAHLAGLPPNMSSVDVALAVAALAGGTPPAVPPGAPPIPFYAPTMITHNWYFANVARQFQNVATSTPQEVAVEKSGNGGGGSGGGGVGEQPLDLSKGSSNASNSSPEPKSVITGGNNIRMPSIDAAKQIFSSDFRAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLSSSTALKLDEDEILDDDKELSGTEEEKEVEKALQAPLLSMADILRFSGMEHPPEAIKLFLQKVKESQEAGSSPLDQSEVVQYLQVYLQALIASQNILANQQQKPPDGSVLNHIIPELAKRLIVEEHLKMQNNNGDSERLSRSSPSNSVITKVEKSSPIKSEPEPIESPSNVILKIPSYRATTTIPTTSTSAISKNGGCGDIFSRSNSLDSTSSRLVSPPMAGDSNSPPILPGKGLLIKDVIAQKFQQSLDVPLRRPPVGLDLDFKRSGYTPPLGASLSSVVKQEASSRQQQQQQQVFQQQPGQHHQTKPQNSGGGQPSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLKIAQEKLKQQQQQQQQQQQQNVMTKPSQQKFPSTSPNGIKLPLFEAAAAAGLSPAAAAGLAPGNYHPPFPFWPHPGFPPNPMAAPFLSPSEFFASQMMQKLQEEREKTIGSGSPQGGVATLAKSARQMAESLLDGSAHNGSFLDGIIRSSLESGVPGADDNKLSKEENNIAPENMSNKALLDQLCRNSRLTPLPKPDPNSSGDESYRKSSSPLNFSTGLNNSHVQDDTTTTSFQQQKRSGSPSNKDKTLLNSDATVAVDLSNDSAESSASTTMLERKRSRDETTTDATTVTEPATERKQPRIYLKPDLVKPENLKPEMLVRFRDLLTERNGSGLTLTETVTGCSSSSASEPEAPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -