Hham016694.1
Basic Information
- Insect
- Hypothenemus hampei
- Gene Symbol
- ct
- Assembly
- GCA_013372445.1
- Location
- JABRWK010000001.1:3933895-3946483[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6e-28 5.2e-24 84.0 0.0 2 72 292 363 291 368 0.95 2 3 1.2e-31 1.1e-27 95.8 0.0 3 76 693 767 691 770 0.95 3 3 1e-30 8.8e-27 92.9 0.0 3 75 919 992 917 996 0.95
Sequence Information
- Coding Sequence
- ATGGGGGGAGGAACGGGGATAGCAGAGGGCCGAGAATCATGGCTGTTTGATATCCTTNCGTCCATCACTCAAATCACACGTCTTGAAGAACAACTCGAACAGAAACGTCAACATATCGCACGTCTCGAAACCAAACTGGACCTGCAAAAAGACTATGACGAACTTAAGCGACAGGTGACCATTCTCAAATCGGACCTGGTGAACAATCCACAGGGCAAAGATATCGAATTGTTGTTGGAAAAAGACAAAGATTCAGGGGTGTCGGAACATCATCAACATCAACGACAAATCCACCACGTTCATCAACATCAACCCCCCACTTTACCATCCGTGACCCCTCCCTCCACCTTGCCGCACCCCTTTCAAAACGTGGACACTTTCGGCAGCCTTCTCGGCGAGGAGATCGTGTCCTCGTGGCGAAAAAACATCGAAAACTCTACATCTCACCAAAAATCACCTCAATCCGTAGATGGCGCCAAAAGTACTACCCCAAATCATTTGGTGGAGAAGAGCAGCACCGCGTCCACACCACAACCGATGGACGCTTCGACCAGTCCCCACGAAGCGGGGACTCATCTTCTGGTGAACGGCACCCCAAAGAGTCCCCACGAAGATAACAATAATGTTAACAACAaccataataataacattccTTTGGCGGCCACGTTCGTGAATAACTTTTTGAGGGGCGAGGACAGTTTGAAGAGTCCTTATCGGTTTGAGGAACACCGGTCACCATTTAAGTTCGCCGAAGATTTGGGCATGGCGCCTGGATCGATGGTTGGACGTTTGGGAGAAAGTCTCATACCAAAAGGTGATCCTATGGAGGCTCGATTACAAGAAATGTTGAGGTACAATATGGACAAGTATGCTTCTCAAAATCTTGATACATTGCATATAGCGCGTAGAGTGAGAGAGCTACTATCCATTCATAATATCGGACAGAGATTGTTTGCCAAATACATTTTGGGACTCTCTCAAGGGACGGTCTCCGAGTTGTTGTCCAAACCTAAGCCTTGGGACAAGTTGACGGAAAAGGGACGGGACAGTTACAGGAAAATGCATGCGTGGGCTTGTGACGAGAATGCCATTATGTTGTTGAAAAGCTTAATACCAAAGAAAGATAATTTCTCATCCTCAGGAAAAGAGGGTGGAGCACCGCTTCCTTTCGGCCGTCCCGATTCCTCTGACTTGACCGAAGAACGTCTCGCCCACATCTTGAGCGAAGCAAATAGCCAATTTAGCAATGCTCCTCAACATCTCAAAGGAGAACAATCCTCTGATCTTCATAGTAACGAGGAGGACTCCAAATCGCCTCACGGCTGCACTAGCCCTTTCTCCAAAGAATCGTCTTTGAGTAAACGATTGAAAAAGTACGAAAATGACGATATTTCCCAGGAAAAAGTCGTGCGAATTTATCAGGAAGAGCTGGCTAAATTAATGGGACGTAGAATGGAGGATTTAAGGAGTCCAAGGGATGGGGGCGGCTTCCCTCAGggtatgttcCTCCCACAATTCTTTAGCAACATCCCCATGGACCGGTCCGATGAGATCCGTATGGCTTTGGATGCTTATCATAGAGAACTCGCCAAATTAAATCAGAACCCCTCTTCGTCCCAGATGCCTTTGGGACTGCTGGCCTTTCAGCAGCAAGCGCTACAAGCACAGCAACAGAACCAACAGCAAAACTCCAATGGAGGCGTCCAAGACCTTTCACTGCCTAAAGACAAAGCCAAAATGGTCAATGGCCTTGAAGAGGGTAAAGAAAAAGACGAAGACTCAGTTTCCAGGCATTCAGGAAGCGCTTTCAGCCTGGTAAGGCCGAAACTCGAACCTGGAACGACTCCAAGTGGAAATAGTTCCGCTTCAAGTCCTTTAGGCAACAGTATTTTGCCACCTATGACTCCTACTAGTGAGGATTTTAGCGCATCGGCTGCAGCTTCGCCCTTGCAAAGGATGGCATCAATTACGAATTCTTTGATCTCACAACCACCTACTCAACCACACCATACGACCGCTCAAAGGCCTCTTAAAGCTGTTTTACCTCCAATTACTCAACAGCAGTTCGACTTGTACAATAATCTCAACACCGAGGACATAGTTAAGAAGGTTAAAGAGCAATTGAGCCAATACTCTATATCTCAGCGTTTGTTTGGCGAAAGCGTCCTGGGATTGAGCCAGGGCTCGGTCAGTGACCTATTGGCTAGGCCCAAACCTTGGCACATGTTGACCCAAAAAGGACGTGAACCATTCATCCGAATGAAGATGTTCTTGGAAGACGGTGACGCTGTACATAAACTAGTAGCCAGTCAGTATAAAATCGCTCCTGAAAAACTAATGAGAACTGGTGGATATGGCAACGcATGCGCATCCAGTTTATCCAAATCCTCTTCATTGCcaacaaatcaaaaaatattatctgaAGCCGCAGGATTACTCACCAAAATGCAACAGGACCCTCAAAGTCTCTTGCCCACCTCCCTACAACTCGgACCTCCTCAAGTGAACCAAACTCAAGCACCGCCTCTAGGTCCACCCGGAGCTACTCAAATACCACAGAGCCAGTTATTAAACCATTTAGGGCTACCTCCACATCACGCCATGGCATTGCAAAGTCAAGAATTGCTGAAGAAACAACAGCAAAATATGCAAGCTGGTCATGGACTTCCAACCCATTCTCCATTAGGTCACCAGGGGATGAGAGGAATGCATCAGCATATGAGCCCCAGTGTATATGAAATGGCTGCTTTAACACAAGATTTAGACACACAAGTAATTACCACCAAGATCAAGGAGGCCTTGTTGGCTAATAATATTGGTCAAAAGATATTTGGGGAGGCTGTTTTGGGACTCAGCCAGGGATCTGTAAGTGAACTGCTCTCGAAACCGAAGCCCTGGCATATGCTGTCCATCAAAGGACGAGAGCCATTTATCAGAATGCAATTATGGTTGCAGGATACACATAATGTCGATAGaCTTCAAGCATTGAAAAATGAACGACGCGAAGCCAACAAAAGACGGCGTAGTTCTGGTCCTGGTCACGACAATTCTAGTGACACCTCTAGTAATGATACTTCCGAATTCTACCATTCAAACAGTCCCGGACCTCAAGGCGGTCCAGCTAATGCCAAAAAACAACGAGTACTTTTCAGCGAAGAACAAAAAGAAGCTCTCCGGCTCGCTTTCGCTTTGGATCCGTACCCAAATGTCGCCACTATCGAATTCCTCGCACAGGAGTTAAGCCTGAGCAGTCGCACCATTACCAATTGGTTCCATAATCATCGCATGAGATTAAAACAACAGGTTCCTCATGGAATACCTTCGGACATTCCACCACGAGATCAAAATTCTTCGCAGCAACCATTCGATCCTGTACAATTTAGAGTATTGCTTAATCAGCGACTCATGGAGTTGAGCAAAGAACGGATGGGTTTGGCAGGAGTCCCGCTACCATATAATCCATATTTGGCTGCAAACCCCAGTTTAGCAGCATTGATTTCCAGAGGTTTACTACCTGCAGGGGATTTAAGTGACCTCTCGGCGCTCAATAATGCCGTGAAAGAACAAATGAGCGGTTTGGATTTGAGTATGACTTCACTGAAACGGGAACCGAACGAATTTGAAGACGACGATGATGTGGAGTCGAATGTAGGATCGGAAGATTCACAAAATTCGGGAAGTTTAGGTCAGGACGAGACGAAAAACGAAACAGGAGGAAAGGAAACTAATATTTCCAGTTCGAGTCTGAGCCAAGGAAGGACTTCTCGAAGAAAACCGGCGGCACCCATGTGGGTTAATCCCCATTGGGAAGAGGAAAAGAACCAGGAGAAAGGCCAAAGCAATCAAGACGAAGTGATAATCAATGGGGTTTGTGTGATGCAAACCGACGATAACTATGCCCCACGTCGTGGTTCCACAGAAGAAACTGTCCGAGTAGAACCCCAAGCGGTTTTAGATCGATTTGAAGACGATAGAAGTGAAACGAGCAGTGTTCGGACGCGAGACGATGGAGATCGCGATCATAGGGTCGAAGATGTGGAGGCACGTTCGGAAGAGGACGAACGCCACCATCATGGTGACCAGGAAGAGGACAGAAAAGACATGGTCAAGGTGGAAAACGAAGACGAAAGATGGGACATTATGTGA
- Protein Sequence
- MGGGTGIAEGRESWLFDILXSITQITRLEEQLEQKRQHIARLETKLDLQKDYDELKRQVTILKSDLVNNPQGKDIELLLEKDKDSGVSEHHQHQRQIHHVHQHQPPTLPSVTPPSTLPHPFQNVDTFGSLLGEEIVSSWRKNIENSTSHQKSPQSVDGAKSTTPNHLVEKSSTASTPQPMDASTSPHEAGTHLLVNGTPKSPHEDNNNVNNNHNNNIPLAATFVNNFLRGEDSLKSPYRFEEHRSPFKFAEDLGMAPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAIMLLKSLIPKKDNFSSSGKEGGAPLPFGRPDSSDLTEERLAHILSEANSQFSNAPQHLKGEQSSDLHSNEEDSKSPHGCTSPFSKESSLSKRLKKYENDDISQEKVVRIYQEELAKLMGRRMEDLRSPRDGGGFPQGMFLPQFFSNIPMDRSDEIRMALDAYHRELAKLNQNPSSSQMPLGLLAFQQQALQAQQQNQQQNSNGGVQDLSLPKDKAKMVNGLEEGKEKDEDSVSRHSGSAFSLVRPKLEPGTTPSGNSSASSPLGNSILPPMTPTSEDFSASAAASPLQRMASITNSLISQPPTQPHHTTAQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDGDAVHKLVASQYKIAPEKLMRTGGYGNACASSLSKSSSLPTNQKILSEAAGLLTKMQQDPQSLLPTSLQLGPPQVNQTQAPPLGPPGATQIPQSQLLNHLGLPPHHAMALQSQELLKKQQQNMQAGHGLPTHSPLGHQGMRGMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLQDTHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTSEFYHSNSPGPQGGPANAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAQELSLSSRTITNWFHNHRMRLKQQVPHGIPSDIPPRDQNSSQQPFDPVQFRVLLNQRLMELSKERMGLAGVPLPYNPYLAANPSLAALISRGLLPAGDLSDLSALNNAVKEQMSGLDLSMTSLKREPNEFEDDDDVESNVGSEDSQNSGSLGQDETKNETGGKETNISSSSLSQGRTSRRKPAAPMWVNPHWEEEKNQEKGQSNQDEVIINGVCVMQTDDNYAPRRGSTEETVRVEPQAVLDRFEDDRSETSSVRTRDDGDRDHRVEDVEARSEEDERHHHGDQEEDRKDMVKVENEDERWDIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00443834;
- 90% Identity
- iTF_00830134;
- 80% Identity
- iTF_00830134;