Basic Information

Gene Symbol
Arid2
Assembly
GCA_013372445.1
Location
JABRWK010000020.1:962620-981155[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-24 8.1e-21 74.2 0.0 2 89 16 101 15 101 0.93

Sequence Information

Coding Sequence
ATGGCCGATATCCTTGGAAAAGATGAGGCCACATATTCGAAGGAGAGAAACGGTTTTCTTCGTGATCTACGGCATTTCCACGAGACCAGAGGAACGCCGTTTAAACGTTGCCCTACCCTAGGAGGAAAAGAGATTGACCTCTATCTGCTTTATTCATTAGTTACTGCCGAAGGTGGATGGATCAAGGTCAATTTAAAGAACTCCTGGAACGATATTTGGCAACATTTCAAGTTTCCATCTCTCTGCGTAAATGGTTCTGTAGCTCTCAAGCAAATCTACTtaagatatttggATCGATGGGAAAAAGTACATTTCCTGGGCGAAGATGGCGATAGGGGCAGTGACGATGATGAGGAGAGTAGACATAAACGATGGTCCGCTAGGGTATTACACGCCGTTCCTCATGCATATCTTTACTCACAACATAATATATCAGatGAAAGGCGTGAGACTCACCATCTCGACGGAAACCTGTATAAACCTTCCGACTATGATAGGCTAGCGCTCTCTTTAATATCACCCCTACCCAATGAACAAGACTTTGCAATTAACGTTTGTACACTACTCTCAAACGACAAtagaaacaatttgaaattggaCAAACATCCTAggattgtcaattttttattggcGCATGCGGGAATTTTTAATCACAgCTCTCTTCGAAAACTGTTTGTATATAATTACAGTGAGGTAAGGAAAAAACCTATACACAATTTTTGGAATGACGTTCTCGAATCTGATGAATTTTTGGATCTCACAAACGAGACTAAGTTTTACACTTTAAGGGACGAGGGAAAAATCTGTGATACGTTGATAAAAGACGATTTTCTGAAGTATGCTGATTTGGATGCGGTAGTTTCAAATCGTGATCGGAACTCGAGAAACGTTAGCGAAATTGAAAGTgattatgaaattattgagAATCGTTTGCTGCAGTTGCCAAAGTGTTTTCAGTTCAAATCTGATCCGACCTATCGAGAACTGTTCTGTTTAAGGCGAACTTTAGGTACTCAAGACTATGTGGGTCAACGAGTACTGCAAATAGCaactattttaagaaatctttCGTTTATAGAAGACAACGTGCCTGTGTTGTCGAGAAATACTGCGTTTGTtcgttttttgttgttatgttCGTGTTCTCAGTGGggtacattgaaaaatttaggtTTAGATATGTTGGGTAATATAGCTTCCgattttgaattgaaagacATTCACACCGATCTAATTGCGGCTTCGTTActcaaaataataagtaaGAATTTGCAAAGCGATGATCGCGCCTCGTGTCTGTCATCCGTGGaagtattaaacaaattaagtcAAAACGAGAAGAATGAAGACGTTCTTTTACGTTCCTTAGAATCAtctgtatataaaaaagtttgttcGTTCCTTACCATTCATGACGTCATGTTACTAATTTATACGTTGGAGTGCCTGTACTCCCTTTCGTCACTTGGAGAAAGGGCTTGCAATTACATAGCGACCAATCATGGAGTGATCGATACCCTAATGTCACTGGTGACGGTTGAGGGTAAAAGTTATGGACCGAAAGCGTGCATCGGCATGAAACTTGTCGAAACAATACCGTCTGGTAGTCAAGTGACGGCGCAGTCACAATCTTCTCCGCAGCAGACTGGAAATCAATCTCCACAGACGTCCAGTCAACAGCAAACGACGCAAAATACTTTCACTCCAATTTCATCTTCTTCGTCCAACACTTCAAACGTAATTACTTCAATGGCGAGTTCACCGCCAGCACCCAGTGTCACTCCTGTGAAAGTTATTCCGAACATGACCAGTACACCGGTAAAAACAGTACCTTTGGTTCCGCAAAGAATATTAGCGACGCCAGCTTCTGTTGTCAAAACAGaaaccACTGTGAGTACGACCATTGCAAAATCCGTAGCATCAGTGACTCCATCTGTAACGACTACTACCCCAACAGTGACAGCGCCTACGGTGATTCCATCTCTCACTCCGCAGCAGTTAATTCAACAGCAGCATGCTCATCAGCAGGCCATTCAAGAAAACGAACAGTTCGCCTTGGCATGGTTGCGAGCTACTTACGAACCGTGCAGTTCTGGTACAAAaaTTGATCATCAGGAATTATACAAACATTACATTAGCTCTTGCTCGAAAATTGGCCGAAGGGGTGTTATATCTCCTCTGCATTTTCCAAGATGTGTTAGGTCAGTATTCGGTGGCACTGTGGGTCCGAATCCGATGAAGCCGGCAAATCCGAATGATCCTCAATTCTACGAGGGTATAAAGGTGCGCGCGCAACCCTTAAATTTAATCGTCCCGCCTCCGTCCCCGCCTCCAAAACCCGTAATTCCTCCCGTTCCCGCTTCGAAGTCATCGTTGCGCCGAAAACAGCAAAAGGTCGCGGGGGCGACACCAATAAAAGGTAGCGCCGCCGCTCCTCTGGCTGTCGATGCGGAACAACAAGACGGCAGCTCGAATATTCTATCTCCCGCATCTCCTATCCTTAAGGCTCAGCTGAGCGCTCCGCCAAAGCCGAGGGAGAGCTCAGGCTCTAGCGTCGCTCCAAGTGATTCCAAAAGTCAgGCGACGGCTCATCCCCATTTGAGCCATGCGCTCTTAGGTAGCTCTACGACGACGATGGCAGCTACAACGAATCCAACGGAGCCAAAACCATTGGAATCTCACGTGGTTCAAGCTGGTCAGAGTAATAGCAGTTCGTTAATTAAGAGTCTTCTGGCGACTAAGGTAAACGATGCATGCTTGCCAACTGTGAGCATGAAGACTGCGACAACAGACTGCCAAAATGTAGCCCAGGTTGCTGCTCGTCAACAAAGATTGCTCTCGCAACAAACCACAGAAGGGGTACCACCAAAAAACCAAAGCCGTTTGGAGGCCTTAAAAATGCACCGTATAAACGGGGTGCGTCAATTATTCAATGACAGCGATGTGGGTGATCCCGCTGTTTCCTCGACAACTCAGTTTGTAGGAACGAGTAAGGGGAAAAAAGAACCACCGCAACCTCCGCCTCCACCGTTAGCACCGCTAAGTAATAACGTGAAATCAAAGACTCCGCCTATCGTGAACGAAGACAGTGATTCTTTAGGAAATCATTCACTATCCTCTACTTCGGGAATCGGTGCGGTGGGTATCGTCTCGTCGACGGAAGATAATGACAATTCTTTAACGAGTTTCGAGGGCTTGTTGAACGGAATGCCTATAGTCGAGGATACGTTGAACGAGAGCAGCAATTCCAAAGATTCGATTAAAAATCCGGGCAATGAGATAAGTATCGATAAGCCTTTGCGATTGGCGGATTTACTCGAGAAAAAGGTTGATAAAAGTCCGACTCTTTTAAATGGAAGTTTGAGTAAGGACTTAAAGTTGAGTAGTGAAAGATTGGATTTGTTGGACAATCATATCGAGAAAGCTTTAAGTAGAGATAACAACGAAATGAGAGTCGAAATTGAGCAACATCAGGAGGAGGAAACGGTGGTGGAGCTGAAAATTGAAGAGCCAGATGTTTCTGATACTAAACAGGGACTGAAACGTGCACCATCTGATCCAACTGCAGAAGTAGAGGCAAAAAAGCCTCATTTGGCCAGTGTGAATGGGTCTGGCAGTGTTAATTCGCAACCGCCCGACTCGTCTAATGGTGAAGAACGTCCGTCGACTGTTTCGACTGCCGCTGCCAAGTTGTTTGCTGATTTTGCAGCAGATATTCTTGAGGATGAGGACGAAGACCAATTGATGCAGGAACCACAGCCCCAAACTGCAGCAACAACCGTTCAGCAGACTGTAGTCGAATCTGGAATTTCACCACAATTAATAGTCGATAATAACCAACAGGTGCTGCTTTCTCAGCCTAGACAAATCATCGTTTCTCAACCCCAAATGATTCATTCTTCTAATCAACAAGTGGTGATTTCTTCAGGAACTCCTATCAAAACTGCCTCGGGTCAAACGGTTATTGTGAATGCTGGCGTCCAACAAAGACAATCGGTACTCATTCAACCTACTAACACGGGACAATTGTTGTTATCACAAGGGATTCAAGGACAAGTGCAGTTGGTACAAAGTACACAGAGTGGACAATATGTCATTCAAACTAATCCAACTCAAGGTATTATGGTGGCTCAACCTCAGACCACGGTGGTGCATGGACAGCCTCAGACTGTTCTATTGGCGCAGCAAAGTCAAAGTGGTGGACAGAAGACCATAATTATTCTTCAGCAACAATCTGCCAGTTCTGCTACTCATCATCAAAAAGTGGTGGTTACTCCACAAGGGCAACCAGTTGTGGTAACTCAAGTTCCTAGGCCCATGGCTCAATCGCCAAcgCTTTCTAGTAACAACGTTCAGCAAACGAAGGCAGTTAGACCCACTCCAACTCCTTCACCAGCTTTAAGCACCGCATCGACTTCGTCCACTCTAAGTAACGGAGTGAAAGAGAAACAAGAAGAGTCCACACCCAAAGTGAAAATCGTTAGAGATCTGACGACGCCTTTTGTTTGCGAATGGGGCGATTGTACCATTGATACCAAATTTAAATCACCAAATCAGGTTTATATGCACGCATGCGAAGCGCATTGTCCGCAGGGTGATGAAGAAGTAGTGTGTCTATGGGATCGATGCGATTCTTTGAAACGTAAAAGATTCTCATTAATGACACATCTACACGACAAACACTGCAATATTGAGGCTATGACGCAAAGCTTGGTTCGTCGAAAAAAGGTGTCCCAAGGTCTCAGCGTCGAACCACCGCCTACAACGCCCAGTACTCATCCTGGATACGCCCCGGACGCTGCGCTACACGCCATTAAGAGACACGCATTGGAATTCGTGAATCCGAAAGAGTTGCAGATCAAAACAGTCAAGCAGGGCACTACCACAACAATAAAAGTTCCGCTCCCACCTTCAGATCAGGATGACAACGAAGGTCCCGTAACGAAAAGCATAAGACTAACGGCCTCGCTGATATTACGAAATCTGGTCATTTACAGTAGCAACTGCAAAAGGTACTTAAAATCTTATGAGTCTCATCTGGCAAATATTGCATTAAGCAATGTAGAATCATCAAGAACAGTAGCACAAATACTTTACGATATAAACGATGGTACGACCAATATTACTACTACTAGGTGA
Protein Sequence
MADILGKDEATYSKERNGFLRDLRHFHETRGTPFKRCPTLGGKEIDLYLLYSLVTAEGGWIKVNLKNSWNDIWQHFKFPSLCVNGSVALKQIYLRYLDRWEKVHFLGEDGDRGSDDDEESRHKRWSARVLHAVPHAYLYSQHNISDERRETHHLDGNLYKPSDYDRLALSLISPLPNEQDFAINVCTLLSNDNRNNLKLDKHPRIVNFLLAHAGIFNHSSLRKLFVYNYSEVRKKPIHNFWNDVLESDEFLDLTNETKFYTLRDEGKICDTLIKDDFLKYADLDAVVSNRDRNSRNVSEIESDYEIIENRLLQLPKCFQFKSDPTYRELFCLRRTLGTQDYVGQRVLQIATILRNLSFIEDNVPVLSRNTAFVRFLLLCSCSQWGTLKNLGLDMLGNIASDFELKDIHTDLIAASLLKIISKNLQSDDRASCLSSVEVLNKLSQNEKNEDVLLRSLESSVYKKVCSFLTIHDVMLLIYTLECLYSLSSLGERACNYIATNHGVIDTLMSLVTVEGKSYGPKACIGMKLVETIPSGSQVTAQSQSSPQQTGNQSPQTSSQQQTTQNTFTPISSSSSNTSNVITSMASSPPAPSVTPVKVIPNMTSTPVKTVPLVPQRILATPASVVKTETTVSTTIAKSVASVTPSVTTTTPTVTAPTVIPSLTPQQLIQQQHAHQQAIQENEQFALAWLRATYEPCSSGTKIDHQELYKHYISSCSKIGRRGVISPLHFPRCVRSVFGGTVGPNPMKPANPNDPQFYEGIKVRAQPLNLIVPPPSPPPKPVIPPVPASKSSLRRKQQKVAGATPIKGSAAAPLAVDAEQQDGSSNILSPASPILKAQLSAPPKPRESSGSSVAPSDSKSQATAHPHLSHALLGSSTTTMAATTNPTEPKPLESHVVQAGQSNSSSLIKSLLATKVNDACLPTVSMKTATTDCQNVAQVAARQQRLLSQQTTEGVPPKNQSRLEALKMHRINGVRQLFNDSDVGDPAVSSTTQFVGTSKGKKEPPQPPPPPLAPLSNNVKSKTPPIVNEDSDSLGNHSLSSTSGIGAVGIVSSTEDNDNSLTSFEGLLNGMPIVEDTLNESSNSKDSIKNPGNEISIDKPLRLADLLEKKVDKSPTLLNGSLSKDLKLSSERLDLLDNHIEKALSRDNNEMRVEIEQHQEEETVVELKIEEPDVSDTKQGLKRAPSDPTAEVEAKKPHLASVNGSGSVNSQPPDSSNGEERPSTVSTAAAKLFADFAADILEDEDEDQLMQEPQPQTAATTVQQTVVESGISPQLIVDNNQQVLLSQPRQIIVSQPQMIHSSNQQVVISSGTPIKTASGQTVIVNAGVQQRQSVLIQPTNTGQLLLSQGIQGQVQLVQSTQSGQYVIQTNPTQGIMVAQPQTTVVHGQPQTVLLAQQSQSGGQKTIIILQQQSASSATHHQKVVVTPQGQPVVVTQVPRPMAQSPTLSSNNVQQTKAVRPTPTPSPALSTASTSSTLSNGVKEKQEESTPKVKIVRDLTTPFVCEWGDCTIDTKFKSPNQVYMHACEAHCPQGDEEVVCLWDRCDSLKRKRFSLMTHLHDKHCNIEAMTQSLVRRKKVSQGLSVEPPPTTPSTHPGYAPDAALHAIKRHALEFVNPKELQIKTVKQGTTTTIKVPLPPSDQDDNEGPVTKSIRLTASLILRNLVIYSSNCKRYLKSYESHLANIALSNVESSRTVAQILYDINDGTTNITTTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-