Hham012868.1
Basic Information
- Insect
- Hypothenemus hampei
- Gene Symbol
- ARID5B
- Assembly
- GCA_013372445.1
- Location
- JABRWK010000083.1:97298-103819[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6 1.1e+04 -3.2 0.1 32 46 115 129 115 132 0.84 2 2 8.1e-25 2e-21 76.1 0.1 1 89 223 309 223 309 0.93
Sequence Information
- Coding Sequence
- atgtacattGACGAAGTTTTGGCAATATCTGAAAAGGTCGTTATTCGTCTGGAAGACCTCATTACCTGGATCACAGTAGAGACTGAGTGGAATTGGGGTAGATTAGCGAAATGCGAGGACGATTTGAAGGACGTAGCCGTTGAGCCGGATCAACTAGCCAGTCCGAGAAAACCTGCTGGAAACAGTTTCACTTTGTCAGAAAACATTATGGACTTTTCAGATGTTGACCAGGAGAGAGATAAATTTGAAGATGCTCCGAAATTTGGTCCCCACGTCATAATCTTGAGCTTTCCGAAATATTGTCGTTACAGAGCCATGATGAGACGTCTGGAAGACGTCGAAAATCTTTACCTTAAATACAAGATTGTCAATGCCCTCGGCGGGTTTTACGTGAAACATCCCAATACTAGGGTCCTATTTTGTCGGGACACTTTCGATTATCCGGAATTGGAAGGTCACGAATTGTTGTGCAATCACCTGGCGCCGAAATTAAAAGGACGACCAAGGGGCAAACGGAAAAAACGCAGCGTGTCGCCCGGATCTGAGAGCAACGAGTCGGAATCGTCAATTAGTAATCATTATACCAGGATAAGTGAGAAATCGAATGGCGTTTGTGGTACCAACTCAGTAGCCACGAGACGTAGCACGAGGTGTCAcgaaaataacgaaaataaacaatttatgaaGGTGTTATCCGCCTTTATGAAATCGAAACAATTGCCCATGGGACGCATCCCTTCTTTAGGTTACAAAGAACTAAATCTACATGAATTTTACACACGAGTTCAAAAATTGGGCGGTTACGAGTGCGTAACCACAAACCGTCTTTGGAAGTCGATTTTCGACGACATGACTGGCCATTTGAACAGTACAAGTGCAGCTACGATAATTCGTAGACATTACgaaagatttttgttgCCTTATGAACGTCACGAAAAAGGTGAAGAAGATAAGCCGTTACCTGGATCAGAAAGACGAAGACTTAAAAGCAAACAAACCGATACGGGATCAAGCGATTCCGATTCAGGAAGCGTTTCGCCTACAACATCTAGATCAGGCACTAGTACGCCTATTGAAGCCGAAAATAGTAAAGAGTCTGTATCTCCAGGAAAAACTTCTTCCCTTCGGAGTATTCGAGTAAAACCCCAAAAGGACAAACCCATGGAACTAGACCAAAATGCCTCCAATACACCTACACTCATTAAAGATGAAGTTGAGGAGTTCAAGAACAATAACGACGACAACGAACCTATAAAAGTTGAAAGTTCAGATTCAACAGTTGCTATTaaggaagaaattaaaatcgaaGTGAAACAAGAGATATCGGTTGACGAAGATGTGAAGCCAAAGATTGAGCCCGAGGAAGTGAAACCATTGTTGATTCCAGAAAAAGTAAAGACTGAAGGCTCAAATCCTGCTGAACCAGTGACCAATGCAATTGCTCCTGTAGCTTCGACAGTGGTGCCTGAAAAAAACTTATCTCCAATAGagggaaaagaaaatattccaattaaaaCGGATGATGTGGAAACAATTAGTGCCGCTCGCAGATCTCCTAAAGTGGAATTCAGAAACGAAGACGATACAGCCATTCGGGACGTCAAGAAAATCAAActggatattttaaaagaaggaGGATTAGAAGTGACTCCCGTTAAATCGGTCCCGACTGCTACCTCAATAAAAGAATTCCGACCATCTGTAATACAGGCGCCAacgaataattttcttaaacctGCCGTAATGGCTCCACCATCGCTAATGACGAACGTCTTGTCAAAAAGAAGCATCCACCCGTCTTCATCTGTAGGCTCTGGTGTTAATGTCACCCATATAAAGACCCCATCGACACCAGTTAAGCAAATGATAAAGCAACCAGAAagttttccttatttaaatGGTGCTACACCACCGAAAGTTGTTCAATCCAAGTCGATTTACTCTTATTcagaaaaaactgtttatgGGAATCCTAAAGATTTCTTACAGTCACAAGTCATTACACCTCACGCGCCTAAATCGCACTTTCCCCCATTGAGATATGGGGGAAGTGACCCAATGGACTTGTCATTGACCAGTCCGCAAAAACCGGTTGTAGAAATAATGCCCGTACCGCAAAATTTATCAACAGCCGCTCAATCGTCCTATAATAGCAGAGCTAgtgtaacaaaaaatttgtataaaaccACTCCTCCATTACTGGATGGGCGTAAACTAGGGCCTAATCTAGAAATTACATTGGTGAACCCTAAACAACAACCTATAACACCAACTCCAAGACACCATAAGCGTTCGGGGACAGAGACTTATGCTCAGAAAATAGCGAAATTAAAATCGGAAGAATTGAATAGTAGACATTCGAAATACGCAAACATTCCGCCGATTCACCATCATAACAAAAGTACCATGGATATTCCAGTTCCTAGTccgtatattaaaaacaatagtaGTGTTGTTCCGAAATCCATACCAACGGATTACAATAGGCAAAGCGCACAAGCAATACCTCAGAAACATCTGGTACCTCCAATGCCTCCGCAAGCTATGCCTTCATATCACCATCCAAGCTTTGCACCACCACCTGATAATTCAAGTAGATTAAGTGCTCCATTTATGAACATGATGGATCCGTTGTATTATCAAGCGGCTTTGCAAAACGTTTACTCAAATTTCACAAGTTTACCGCCCATGTTGCCCATTCCGACTGctgaacaattaaaattctatgCCGATTTAATGGCCCACGGACGATTTAATCATCCGGCTGCGTATTCGCACCCTGCTGATGGACATCCGTCCGTTAATAATAAGAAACcctaa
- Protein Sequence
- MYIDEVLAISEKVVIRLEDLITWITVETEWNWGRLAKCEDDLKDVAVEPDQLASPRKPAGNSFTLSENIMDFSDVDQERDKFEDAPKFGPHVIILSFPKYCRYRAMMRRLEDVENLYLKYKIVNALGGFYVKHPNTRVLFCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSISNHYTRISEKSNGVCGTNSVATRRSTRCHENNENKQFMKVLSAFMKSKQLPMGRIPSLGYKELNLHEFYTRVQKLGGYECVTTNRLWKSIFDDMTGHLNSTSAATIIRRHYERFLLPYERHEKGEEDKPLPGSERRRLKSKQTDTGSSDSDSGSVSPTTSRSGTSTPIEAENSKESVSPGKTSSLRSIRVKPQKDKPMELDQNASNTPTLIKDEVEEFKNNNDDNEPIKVESSDSTVAIKEEIKIEVKQEISVDEDVKPKIEPEEVKPLLIPEKVKTEGSNPAEPVTNAIAPVASTVVPEKNLSPIEGKENIPIKTDDVETISAARRSPKVEFRNEDDTAIRDVKKIKLDILKEGGLEVTPVKSVPTATSIKEFRPSVIQAPTNNFLKPAVMAPPSLMTNVLSKRSIHPSSSVGSGVNVTHIKTPSTPVKQMIKQPESFPYLNGATPPKVVQSKSIYSYSEKTVYGNPKDFLQSQVITPHAPKSHFPPLRYGGSDPMDLSLTSPQKPVVEIMPVPQNLSTAAQSSYNSRASVTKNLYKTTPPLLDGRKLGPNLEITLVNPKQQPITPTPRHHKRSGTETYAQKIAKLKSEELNSRHSKYANIPPIHHHNKSTMDIPVPSPYIKNNSSVVPKSIPTDYNRQSAQAIPQKHLVPPMPPQAMPSYHHPSFAPPPDNSSRLSAPFMNMMDPLYYQAALQNVYSNFTSLPPMLPIPTAEQLKFYADLMAHGRFNHPAAYSHPADGHPSVNNKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -