Basic Information

Gene Symbol
Ubp1
Assembly
GCA_013372445.1
Location
JABRWK010000008.1:844061-856647[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.5e-69 8.2e-65 218.1 0.5 13 220 224 432 214 435 0.89

Sequence Information

Coding Sequence
ATGGAGTTTAAACTTTGCACAAACGATGTTTTATCGAACGAAACGTCCTCATCATCTACATCAAGTTCCAAGGAGTCTTGGAACGGCATTATAATGGATAATGGAGAGGAATATTTCAGTTGGAACCCATTGAAAATGGACGGAGACGAAAAGTTACAAATGACTAAGAAGAGGAAAGCTTCCATTGAAGATCATCATCGTGGGAAGCAGCATTACAGAATTTCCAAAAGCCCTTTGGGTTTTGATCAGAAGAACGATTCAGAAAGGAAGAAAGGTCTTCAAAATGGTAAAGgtACGGTAAGGATGCCACACTGGCAAGTTGATGATTACGTAGACATTCATCAGGACCTTGATAATCCGTTGAATTTGGAACAGAATTTAACAACCACCAGTTACAACAGCGAATCCATTTTGAGCATCAACGGTATGACGGGGTTCAAACAAGAATCGCCGTCCCCTACATTAAACGAACTGGCATTACACTCGAACAGGCAAAGTCCTACATCCACACAGCAGGGATTGACTGCTGTGATGGGGAACCCGGCAACGAATAACGGTACCATGGAGGAAACTAGCCAAAACATGTTTAATAATACGATTAATCAGCTGTTCAGTCAGAGTGCTTTGGTCAATTTGCATTCTGTTATCGATAATAGCAATTTGACATCTTCCCATTCTCAAGACAATTATGCAATCTCTTCAACCAACTACAACGTAATCGAAGATTGTCGCTTTCAATACGTACTTGCGGCAGCAACCAGCATAGCCACCAAACAGAACGAAGATACTCTAACTTATTTAAATCAAGGACAGAGTTATGAAGTGAAACTAAAGAAACTGGGCGATCTATCAATGTATAgaggaaaacttttaaagTCGATTATTCGTATTTGTTTCCACGAGAGACGTTTACAATATAtggaaaaagaacaaatgGAGGCGTGGCAAAAGGCTAGACCCGGCGATCGAATACTGGAGGTGGACGTGCCACTTTCTTATGGCGCTTTCGACATAACCCAACCTAATAGTGCCTTGAATGTTATTAGTTTTGTATGGGATCCAACCAAAGAAGTTGGTGTTTATATTAAGGTAAATTGCATAAGCACAGAATTCACCCCAAAGAAGCACGGAGGTGAAAAGGGGGTTCCCTTTCGCATTCAAGTGGAGACCTATCAAAACAGCGAGGTCCTATCAAATGCGAAACGTCTTCACGCAGCCGCTTGTCAAATTaaagtgtttaaattgaaaggaGCAGACAGGAAACACAAACAGGACAGGGAAAAGATCATGAAACGTCCATTAGCTGAGCAGGAAAAATATCAACCTAGCTATGACTGTACTGTGTTAAATGATATTTCAAATGATGCTGTTCTTCACACTCCAGGACTTACAAATGTTTCGTATTCGACAACTGATAGcTGCCCCGAATTTATAAACAACGCAACGCCACAAATTCATGTTCAACAAAATGTAGAACAATTGCCAAGTCAGAAAAGCTATAATAGCGCCCCTCATAGTCCTGATAAGAAAGATGACAGCTCAAGCACTGACAACATTATTAATGACtgTTTCAATGGTAATCTTTTGACACAGTTTTCCAGTCCAGACGAGACCAGCCATTGGCTCACGGTGAATCGCTTCGATAAATATTTAGATCTGTTTTCACGATTTTCTGGATCAGATATGCTGCGCATGTCGAGAGAAGACTTTGTGCAAATTTGCGGTCACGCCGATGGCATTCGTTTGCATAACGCTTTGCATTTAAAAGCGATAGCTCCAAAATTGAAACTATACGTCTGCAGAGAAAACATGTCAGTGTTCAACGCTCTATATCTAAGCACTCACAGTCACACAGAACTTCTGCAAAAGCTCTGTTCgatgtttaatattaacataGACCAAGTGAAAGCTGTGTATTTGGAAGGGCCTCATTCAATTCACGTGCAATTGACCGACGATGTTTTAAAGCACATTGAGGAGGAAACTATGTTTGCTTTGAGCGTCGCACAAGAGAATGGGATGTTTATTTTGCTGCTTAAGAGAAAAACTAAGCAGTAG
Protein Sequence
MEFKLCTNDVLSNETSSSSTSSSKESWNGIIMDNGEEYFSWNPLKMDGDEKLQMTKKRKASIEDHHRGKQHYRISKSPLGFDQKNDSERKKGLQNGKGTVRMPHWQVDDYVDIHQDLDNPLNLEQNLTTTSYNSESILSINGMTGFKQESPSPTLNELALHSNRQSPTSTQQGLTAVMGNPATNNGTMEETSQNMFNNTINQLFSQSALVNLHSVIDNSNLTSSHSQDNYAISSTNYNVIEDCRFQYVLAAATSIATKQNEDTLTYLNQGQSYEVKLKKLGDLSMYRGKLLKSIIRICFHERRLQYMEKEQMEAWQKARPGDRILEVDVPLSYGAFDITQPNSALNVISFVWDPTKEVGVYIKVNCISTEFTPKKHGGEKGVPFRIQVETYQNSEVLSNAKRLHAAACQIKVFKLKGADRKHKQDREKIMKRPLAEQEKYQPSYDCTVLNDISNDAVLHTPGLTNVSYSTTDSCPEFINNATPQIHVQQNVEQLPSQKSYNSAPHSPDKKDDSSSTDNIINDCFNGNLLTQFSSPDETSHWLTVNRFDKYLDLFSRFSGSDMLRMSREDFVQICGHADGIRLHNALHLKAIAPKLKLYVCRENMSVFNALYLSTHSHTELLQKLCSMFNINIDQVKAVYLEGPHSIHVQLTDDVLKHIEEETMFALSVAQENGMFILLLKRKTKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-