Hham002322.1
Basic Information
- Insect
- Hypothenemus hampei
- Gene Symbol
- ATFC
- Assembly
- GCA_013372445.1
- Location
- JABRWK010000178.1:155397-172609[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7 7.4e+03 -3.0 0.0 39 54 11 26 10 29 0.65 2 2 3.6e-11 3.4e-08 33.3 4.4 2 63 240 301 239 303 0.95
Sequence Information
- Coding Sequence
- ATGTCCTATTCGATGTATTCATGGAAGGAGGAGCCGGTGTCACCCCTCAGTTCTGAGGTGTCACTGCTCGAAGACTCATTGTATCAATCAGCCGTACTCGATGACAtcaaattcgaaaatgaaactttCGAGGACTGCGAAACCAAGGCTGAAATGGCCAGTCAAATATTGGAAAACTTGGAAAACCTAGTCGACTTAGATGAGTTGATCAAAGAAGAACCGTCTTTTCTTTTAGACGACAAAATGATTCCGTTACTGGACGAGGCCGAGGCGGCGCCCAGGGGTGCGGTCGCCGTCCCCGTGTCCCTAAAGAACGACCTTTATCCCGTTGACGGTACCACGATGCTATTCAACGAGCTGGAAAAGGTTTACTACGAATTGAATCAGAACCATGGCGCTCTGACGCCGCCTCATAGTCCGCCCAGTGAATCGCCCCATGTGATTACCACCCTAGGGCCCACCAACTACCGGATACCGTATACGGTGCCGTCTTCGCCCCAGGTGGATATCGCTAGGGAATTGGCCGTTGTCGAAGAATTGATCCGGACCAGGGCCGAGGATATGTCATGGAACCAACATCCGTCCTCTCCGGAGAGTTATTACTCTTCAGGTGGTTCGTCGGAAGTTGATTCCGAATGGATACCAGAGGTACTGGAAGACTCTGTGGGAACGGTGCCACAAACGAAGAAACGTTCCGGAAAGAAGCCATATTCACTAGACGATAAAAAGTCGAGGAAAAAAgagcaaaacaaaaatgctGCCACGCGTTAtcgtttaaagaaaaaggcGGAAGTTGAGGAGATTTTGAATGAGGAAAAACAACTTTTGGATATACACACCGGTCTTACTGGACAGATTACCGATTTGCAAAgggaaattaaatatttgaagggCCTAATGAGGGATCTGTTCAAAGCCAAGGGTCTAATCAACTAG
- Protein Sequence
- MSYSMYSWKEEPVSPLSSEVSLLEDSLYQSAVLDDIKFENETFEDCETKAEMASQILENLENLVDLDELIKEEPSFLLDDKMIPLLDEAEAAPRGAVAVPVSLKNDLYPVDGTTMLFNELEKVYYELNQNHGALTPPHSPPSESPHVITTLGPTNYRIPYTVPSSPQVDIARELAVVEELIRTRAEDMSWNQHPSSPESYYSSGGSSEVDSEWIPEVLEDSVGTVPQTKKRSGKKPYSLDDKKSRKKEQNKNAATRYRLKKKAEVEEILNEEKQLLDIHTGLTGQITDLQREIKYLKGLMRDLFKAKGLIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -