Hham012957.1
Basic Information
- Insect
- Hypothenemus hampei
- Gene Symbol
- XBP1
- Assembly
- GCA_013372445.1
- Location
- JABRWK010000181.1:147210-148581[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6e-15 5.4e-12 45.5 8.4 2 52 44 94 44 95 0.96 2 3 4.7e-06 0.0045 16.9 3.3 30 63 86 119 85 121 0.94 3 3 1.8 1.8e+03 -1.0 0.0 18 27 154 163 153 165 0.81
Sequence Information
- Coding Sequence
- ATGTCTACAACCATCCTTCCAGTACCGaccatattaaatattttaaacgacACTGACTACCTGATGAACGAGAACGTCCAATCTCCAACGCCCCGAGCTAAAAAACGCCGTCTAGATCACCTCTCCTGGGAGGAAAAAATCCAGAGAAAGAAACTGAAAAATCGAGTGGCAGCTCAAACGTCTCGGGACCGCAAAAAGgctaaaattgaacaaatggAAACCGCCATTCAACAgttattcaacaaaaatgaGACATTATTGACGGAATGCgaaaaattaaaggatatCAACGAGAGATTACAGGCAGAGAACGTAGATCTTCAACAAAGGCTTCAACAAACTGTGTCACAATGCCAATGTCAAAATCGGACTGTCGTGTGCGCGCCCGAGAGCGGATCAACTGAGTCCCTCCTTCGGCCGAAAGGAACGGGGGCACACACAGCAGCGGTTTTGGAAACGACTTGTCGCAAACGGGCTCTGTTGAAGATAGTCCTGGCCTACCTTCTTTGCCAGACCTACTCGACGAATTGGAATCAGACGAGGTCGATTTCAATGCCCTTGAGCAGCTCACACAAACTCTACTCGAAGATATCGCCCGAGATTTGGAGAACGCTGCTCAAAAGGCAGCTGATCAAgAACCAACCTCTTGTACAGAAGTTGGTGCTAGAAAAGTGGTGGGGACGCCACCAAAACAACTGGAACCCAATGGAAGTGAATTGTTAA
- Protein Sequence
- MSTTILPVPTILNILNDTDYLMNENVQSPTPRAKKRRLDHLSWEEKIQRKKLKNRVAAQTSRDRKKAKIEQMETAIQQLFNKNETLLTECEKLKDINERLQAENVDLQQRLQQTVSQCQCQNRTVVCAPESGSTESLLRPKGTGAHTAAVLETTCRKRALLKIVLAYLLCQTYSTNWNQTRSISMPLSSSHKLYSKISPEIWRTLLKRQLIKNQPLVQKLVLEKWWGRHQNNWNPMEVNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -