Basic Information

Insect: Hyposoter dolosus
Gene Symbol: RREB1
Assembly: GCA_963921915.1
Location: OY998138.1:4924728-4931266[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0013 0.12 13.0 0.0 1 23 62 84 62 84 0.97

2 15 0.00017 0.016 15.8 0.3 1 23 98 120 98 120 0.98

3 15 2.3e-07 2.2e-05 24.8 1.3 1 23 126 149 126 149 0.98

4 15 8.4 7.9e+02 1.0 2.2 2 14 285 297 285 307 0.79

5 15 9.7 9.2e+02 0.8 0.4 1 10 365 374 365 383 0.88

6 15 0.0066 0.62 10.8 0.1 1 23 505 527 505 527 0.97

7 15 5.8e-05 0.0055 17.3 0.3 1 23 536 558 536 558 0.98

8 15 0.0025 0.24 12.1 2.7 1 23 564 587 564 587 0.97

9 15 0.00076 0.072 13.7 2.1 1 23 1035 1058 1035 1058 0.95

10 15 0.00065 0.062 13.9 0.1 3 23 1363 1383 1361 1383 0.97

11 15 0.91 86 4.0 6.5 1 23 1389 1412 1389 1412 0.97

12 15 0.018 1.7 9.4 1.8 1 23 1476 1500 1476 1500 0.95

13 15 0.56 53 4.7 3.1 1 23 1651 1674 1651 1674 0.96

14 15 0.0022 0.21 12.3 0.3 2 23 1726 1747 1725 1747 0.96

15 15 1.3 1.2e+02 3.5 8.2 1 23 1753 1775 1753 1775 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0013	0.12	13.0	0.0	1	23	62	84	62	84	0.97
2	15	0.00017	0.016	15.8	0.3	1	23	98	120	98	120	0.98
3	15	2.3e-07	2.2e-05	24.8	1.3	1	23	126	149	126	149	0.98
4	15	8.4	7.9e+02	1.0	2.2	2	14	285	297	285	307	0.79
5	15	9.7	9.2e+02	0.8	0.4	1	10	365	374	365	383	0.88
6	15	0.0066	0.62	10.8	0.1	1	23	505	527	505	527	0.97
7	15	5.8e-05	0.0055	17.3	0.3	1	23	536	558	536	558	0.98
8	15	0.0025	0.24	12.1	2.7	1	23	564	587	564	587	0.97
9	15	0.00076	0.072	13.7	2.1	1	23	1035	1058	1035	1058	0.95
10	15	0.00065	0.062	13.9	0.1	3	23	1363	1383	1361	1383	0.97
11	15	0.91	86	4.0	6.5	1	23	1389	1412	1389	1412	0.97
12	15	0.018	1.7	9.4	1.8	1	23	1476	1500	1476	1500	0.95
13	15	0.56	53	4.7	3.1	1	23	1651	1674	1651	1674	0.96
14	15	0.0022	0.21	12.3	0.3	2	23	1726	1747	1725	1747	0.96
15	15	1.3	1.2e+02	3.5	8.2	1	23	1753	1775	1753	1775	0.98

Sequence Information

Coding Sequence: atggtgCGGTTTTGTGTATTCGGAATCTCGACAACTGGATATGTGAAAACCTCTACGACTACGGCGGCAGGGGCGACGGAAACCGAACTGTCTGAGAGCATCGTTAATCATCGTCACAGCAGTGACACACTCACAGATGCGGCATCATCGCCATTgACGTCGGATCAGCAAGAGGCAGGAACTTACGCTTGCCCGGCGTGTCCGATTGTGGTGACAACGTCCCGAGATCTGACGAATCATTTGCGAGGCCATAATTCACCGCGCAGTACAGATTGCAGCGGCGAGGAGGATTATTCGTGCGGAGTTTGTCACAAGGTGCTGAGTTCGGCGAGTTCGTTGGACCGGCACGTGCTGGTGCATTCGGGAGAGCGTCCGTTCAAGTGCAAATATTGCGACATGGCGTTCACGACGAACGGAAACATGAATAGACACTTGAGAACGGCGCACGGTTCATCGCCGAGAGAGACAAACGGATTTACGGATTCGGAGGCGAGCAGCGATTCTGATAAGTCAGGAACAAAGAGACGCCACCGTCAGGTCGTTGAGCAAGAGTACAACAACAATGAGATCGGCAAGAGCGGTTCGACGGATTCGCTGATCCAGGCGGAGGCTCCAACGAGCCAAGTGACGAAAAAACCGCGATTAGAAATGGTCgaggaaaataatgataatacaaattcgaaaaagcaCAAAATCATGCTGAATAATTCGAGGACAGAGATTCAGAACGGCGAGGTAGAAATTGAGTCCGATCCGGTGGTCCACAATTGTCCGGTTTGTGCGAGACTCGACTTCCCATCGAGCGAGGCTCTGGACGAGCATCTGGAACGTCACCATCCGGAGTATCCAGCGACCTGTGAAGATTGCAGACTCTCGTTCAAAAATTATCGAGTTCGCTGTCTCCATAATTACATGAAACACgccgattcgaaaaaatcatcgtccGGCACGAACGGCAGAAATTTACGCAATTCCGTCGTGGGTTTCAACGACTTGACTTTTGTGGATTTTTCTGCCGATAAATTCCCGGCCATTGCTCGCGCCGTCTGCGAACAATCGGTGCATCGACCGGCCTCCGGAGAAGTCACCAAATTTCAATGCGATAAATGCCTCAGAGCGTTCCCCTGTCGCTTGGCCTTGGACGCTCATGAAACCGACTGCGGCACGACCAACCAACCGTCCACTTCATCTTCCGACGATCAATCCTCGAGGAGAGACCATTTTTTCGCTGGCCTGGATCTGCAGAATAAAGCCGCGATGAACGAGGCGAAAGAGGGCAAGGATCTCGCTGACATACAGAGCATCATATCAGTAACTTCCGGTCcgatcttacaaaattttccacgATCCGATGCGAGCACTCCGGAGCAACATCAGCAGGTAAAACCCAATCCCAGCATCGCAGGCTCCTCCGGTTCTTCCGGAACGGCATCTTCCTCGGAATACCATCAAGACGAGGAAGTCCAAGACGCTTTTGCTAAAGATTTCCGTCGCATGAAGCTCAAGGGAGAATTTCCTTGTCGTTTGTGCGACGCGGTATTTCCTAATTTGCGAGCCCTCAAAGGTCACAATCGTTCGCACATGGGAGTCGGGCCAGGAATGCCATATCCTTGCAACATGTGCCCGTACACGAGCAACGACAAAGGCACCCTTGTCCGACATCTCAGGTCGCACAACGGTGACCGTCCCTTCGAATGTTCCGTTTGCAATTTCGCTTTCACTACCAAAGCAAATTGCGAGAGGCACGTGAGAAATCGTCACGGAATAACTGTGCGAGACAATGTTAAGAACACTATTGTTTATCATCCATACGAGGACGGCACCAACGACGCCGCAGCACTCGAACGTCAGGACTGTCGTCGCGAGGAAGCTCGCAAGTCTCTCGTCTATCCGGTGCCCGCGATGAAAGCGAGGGACGACAACTCGCAGAGATGCTCAGAATTTTATCTCGGCTTGAATCTTGCCGCCAATCAAAACGGTTCTCTCGTGCCCGAGGATGAGACTCCACTTTCCCTCGTGCAATCTTCCCAGCTTGAGAACAACGAGAGCTCCGCGAGAACTCAAGCTCACTCGCAGGAAACCAGCAGCAGAACCACCGCCGAAGAGCCGGAGGATGACGGCGGCGATTCCGAGTACGAGGACGAGGAGAACGAAAACGAGTCAGCGGCGAAATCAGAAAACAGCCTCCGGCACCGCTACAATGCCAGTGCGGGCTCCTCGGAGGACGATGCAACGGTTTCTCTAGTCAGTGACACCAAAACGATACCAGCCCACCAAATAGTAGTTCAAACTAGTCCGATGGATCTGAAGAAAAGCAGCCCCAGGTCCTCAACCGCGTTGACTACAACCGCGACTCTCAACGGGGAAGAAACCGGAGAGAGCTCTGCTGCTTTCGCAACTGGCGAAGATGCCCCGCTCGATCTTTCCATGGATGTTCTTGATTTGAGTAAAAAATCCAACGGCAATCCAATGCCTTCGACCTCTTCGGTGGTGCCCACGGAGCCCGTCGCCTCGACCTCCACTGCTGCGGCAACGAACAACGAGGCTGAGGTCGGCCGGAATCACAAGGAATTCTACGACGCCACCAATCAGTTTTTACTCACTCAAGCTTTGCTCAAGGCTGGACAACCCGGCAATCCAGCGACTTCTCTCGAGGCTCTGTACGCCAACGCCCACATGATTTATCGCAATTTCGGTGGCTTCTCCGCCGCAGGAGTAGGCGCTGGTATTCTCCCGCCTTATCTTTTCAATCCTCACATGTTTGGTCAGGACTTTGCGATCAAGGACAGGCTCCAGAAGGAACTCGTGCGAGGTTTGCAATTGACGAGCGGCGGCAATCTCGTTGAGCCTCCGATCGGCAACACAGCTTTCGCCGGCGCTTATCCACCCGGCAGAGACCTCGCCGCCTCGCGGCCTGAACTACCCAACGATTTTGGCAATATCAACGCCGCCAATCTCTCGCCGAAAATTGTAACGAGCACCGCCATCAGCCAATCGAACATCGAGACCAACTCGCAATCCTCAAACTCCGTCAAAATGGTCATTAAGAACGGAGTTCTCATGCCCAAACAAAAGCAACGGAGATATCGCACCGAAAGACCTTTCGCCTGCGAACACTGCTCCGCCAGATTCACTCTCCGAAGCAATATGGAGAGACACATAAAGCAGCAACACCCTCATTATTGGAGCCAGAGACCAAAAGGCGGACATTCCACCCGGGGAAGACCACCCGCGAATCCTCCAACTCTCTTATCCCCCGCGAACAATCATCCGCTCTCCCAACAGGCTTGCAACATCATGCCGAAAATGGGGGGTTCCGGGGGATCTTTGAACTACGAGAAACACTCCATCTCCGATCAAGTCAAATACGCGATTCTTGCTCAGCAGCTCAAAGGCACAAGAACCGAGGAGAACGACACCGACGAAGAGTTGATTATCGACGAGGGCGCTCACGAGACCAGAGAGTCTATGATGGAGGTCGAAGCTCAGGTTCACACGACCAGTCTTCTCCGAGGAAAACTCGAGGGAACGAGCGATTATTACAAAGAGAATTCGAGATCGCAGCTCCACCGAAAAGCTTCTGAAATGGGTAAACGAGCGCAGGCTTCCAAAGGGGAAGGCAACAGGCGACAGGAAGTACATCCACCAGCTCCGGAACCCATGgacgctgaagatttttcacaaaGTCGCAAAGTCGCGATAAAAATGGAGCAGAACGAAGAGGAGGAAAGAGAGCACGAGCGAAAGGACGAAAGTCGCCAATCCAGCCAATTCGATGGGTCAGAATTGGTCACGAAAATGGAGCAATCGACGAGCGAGCGGAACGAGGACCTGGCAAGCGTCTCAGAATTACTGGACAACGCTTCTCAACAATATCAACAATTCCAACCTCAGTACATGAGCGACGAAGAAGGCCTTGTCGCTTCCACGAGCGATTGCAACAATTCCGGCAGCGATGAAAAATCCGATTCCATCAATTCGGTCAATTCAAACAACTCGCAAACATCCGACATCcgcaagaagaagaaaaagaagaagatgaagaaaaagaaatctgcTTATTCCATGGCACCCAACAGAGTCATCTGTCCTTATTGCGAAAGACCATTCCCTTGGACTTCCTCATTAAGGAGACACATTCTCACTCACACTGGACAAAAACCTTACCAATGTATGCACTGTTCCCTTCTCTTCACCACCAAGTCCAACTGCGATCGTCATTTGTTGCGAAAACACAAAAACACTGCCAGCAAAATACGTCGCATGAGAAATTCATCATCTCCGGAAAGCCTGGAACAGCCATCGAACAACAACACGACCAAcagtaacaacaacaacgtcACCAATACcacaaacaacaacaataacaacaacaacaacagctcAAGCAGCGCTTTCGCCATGAGGAACGTTCCGGAAAGACCATACAAATGCAATCTTTGCCCCAGCTCGACATTCTCCACTCTGGGCAATCTCAAGAAGCACAAATCCTCCAAACACTCAAGGAACGCCGGCCTCAAATCGAGAGCCGAGTCTCCGGCGACCAGCGAACCTCGCAACAGCCCGATCACCACGATCAACAACAAGCAGAACGACAACAGCGGCTACGAGAGTCAATCGTCCTCCAACTCCGAGAACATGGACCACATCGAACGCATCGCcaacttgaaaaatgttcgttcGACCGATCCCTCCATCGACGAACAAATAATCGCTGAGCCGGAACTCCCGGAGAACCAACAACAATCGCGAGAAGCCACGAGCGAGACACGCCAAATTTCCAACGGAGACAACGCCGAGAACATCGAATGCCAGGACCTTCCGGACAATTCTTCGATCCCCTTGGATCACCGGATGCAAAAGAATAACGAAAACAATTCGACCGTCAGTGAAACCGCCAAACCACGGAGATTgtcgccaaggtcatcgccAGGTCCTGCCGATACTCCGTTCAAGTGTCACCTCTGCGACAGCGGATTCTCCGAGCGTCAGGACTGTCTCGATCACATCAGGATCAACCACACACGATCCTACGAAATCCTCGTCGCCAAGGGCGCCCTGGACATGGATATCGAGACTCCGGAGGAGCAACAACAACCACCAACCTCGGGTCAACACCCCAGCGACGGCGAAGAAAAACGCGGCAGATTTCCCGACTACAGCAACAGAAagGTTGTCTGCGCTTTCTGCTTACGTCGTTTTTGGTCGGCGGAGGATTTGCGACGTCACATGAGAACTCACACAGGCGAAAGGCCATTCTCCTGCGACATATGCTGCCGTCGTTTCACTCTCAAGCACAGTATGCTTCGCCATCGTAAAAAACACGAATCGGTCGATTCAATGATGTACGTCGGTACCAGCGGCGACGAGGAATCCGTTCCTCCCCAGCCCCCGACCATCACCCCACGCTCTCATCAACAAtcccagcagcagcaacaacagagCATCAACACAACGAGCTGCGACTCCAGGATGCAGGAAAGAATGTCATTGCCAACTGTGGCTACTGTCGCGACCGGCGATGCCGCACCAAGTGGTTTGGTGAGATTCAATCCTTACGAAAAACTTACAACTCTCACTTGCAAAATGAACAATGCTCATCAACCCTTTAATCCGAGCGAATGCTCCGCCGACACTGAGAACGATCTGATATCCAATCTTCTTGGCATTCGCGACAAAAGCATCATTGACAAAGTTTTACAAGCATCCGCTGATGACGCCGCCAAATTACTCGGTGTCAATAGACATCACGACTAA
Protein Sequence: MVRFCVFGISTTGYVKTSTTTAAGATETELSESIVNHRHSSDTLTDAASSPLTSDQQEAGTYACPACPIVVTTSRDLTNHLRGHNSPRSTDCSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHGSSPRETNGFTDSEASSDSDKSGTKRRHRQVVEQEYNNNEIGKSGSTDSLIQAEAPTSQVTKKPRLEMVEENNDNTNSKKHKIMLNNSRTEIQNGEVEIESDPVVHNCPVCARLDFPSSEALDEHLERHHPEYPATCEDCRLSFKNYRVRCLHNYMKHADSKKSSSGTNGRNLRNSVVGFNDLTFVDFSADKFPAIARAVCEQSVHRPASGEVTKFQCDKCLRAFPCRLALDAHETDCGTTNQPSTSSSDDQSSRRDHFFAGLDLQNKAAMNEAKEGKDLADIQSIISVTSGPILQNFPRSDASTPEQHQQVKPNPSIAGSSGSSGTASSSEYHQDEEVQDAFAKDFRRMKLKGEFPCRLCDAVFPNLRALKGHNRSHMGVGPGMPYPCNMCPYTSNDKGTLVRHLRSHNGDRPFECSVCNFAFTTKANCERHVRNRHGITVRDNVKNTIVYHPYEDGTNDAAALERQDCRREEARKSLVYPVPAMKARDDNSQRCSEFYLGLNLAANQNGSLVPEDETPLSLVQSSQLENNESSARTQAHSQETSSRTTAEEPEDDGGDSEYEDEENENESAAKSENSLRHRYNASAGSSEDDATVSLVSDTKTIPAHQIVVQTSPMDLKKSSPRSSTALTTTATLNGEETGESSAAFATGEDAPLDLSMDVLDLSKKSNGNPMPSTSSVVPTEPVASTSTAAATNNEAEVGRNHKEFYDATNQFLLTQALLKAGQPGNPATSLEALYANAHMIYRNFGGFSAAGVGAGILPPYLFNPHMFGQDFAIKDRLQKELVRGLQLTSGGNLVEPPIGNTAFAGAYPPGRDLAASRPELPNDFGNINAANLSPKIVTSTAISQSNIETNSQSSNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPHYWSQRPKGGHSTRGRPPANPPTLLSPANNHPLSQQACNIMPKMGGSGGSLNYEKHSISDQVKYAILAQQLKGTRTEENDTDEELIIDEGAHETRESMMEVEAQVHTTSLLRGKLEGTSDYYKENSRSQLHRKASEMGKRAQASKGEGNRRQEVHPPAPEPMDAEDFSQSRKVAIKMEQNEEEEREHERKDESRQSSQFDGSELVTKMEQSTSERNEDLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSINSVNSNNSQTSDIRKKKKKKKMKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNTASKIRRMRNSSSPESLEQPSNNNTTNSNNNNVTNTTNNNNNNNNNSSSSAFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRNAGLKSRAESPATSEPRNSPITTINNKQNDNSGYESQSSSNSENMDHIERIANLKNVRSTDPSIDEQIIAEPELPENQQQSREATSETRQISNGDNAENIECQDLPDNSSIPLDHRMQKNNENNSTVSETAKPRRLSPRSSPGPADTPFKCHLCDSGFSERQDCLDHIRINHTRSYEILVAKGALDMDIETPEEQQQPPTSGQHPSDGEEKRGRFPDYSNRKVVCAFCLRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSMMYVGTSGDEESVPPQPPTITPRSHQQSQQQQQQSINTTSCDSRMQERMSLPTVATVATGDAAPSGLVRFNPYEKLTTLTCKMNNAHQPFNPSECSADTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRHHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01299528;
90% Identity: iTF_00829020;
80% Identity: -