Hdol016088.1
Basic Information
- Insect
- Hyposoter dolosus
- Gene Symbol
- -
- Assembly
- GCA_963921915.1
- Location
- OY998138.1:11686334-11696634[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 7.1e-06 0.00067 20.1 1.0 1 23 232 254 232 254 0.98 2 31 0.0031 0.29 11.8 1.9 1 23 277 300 277 300 0.96 3 31 0.00023 0.022 15.4 0.5 2 23 307 329 306 329 0.96 4 31 0.00012 0.011 16.3 0.6 1 21 349 369 349 370 0.96 5 31 0.0034 0.32 11.7 0.2 2 23 492 513 491 513 0.96 6 31 0.15 14 6.5 0.3 1 23 519 542 519 542 0.91 7 31 0.00013 0.013 16.1 0.1 1 23 606 629 606 629 0.96 8 31 0.0091 0.86 10.3 0.4 1 23 635 658 635 658 0.96 9 31 0.14 13 6.6 1.5 1 23 671 693 671 693 0.97 10 31 4.8e-05 0.0045 17.5 1.1 3 23 738 759 737 759 0.96 11 31 0.039 3.7 8.3 0.7 2 23 827 850 826 850 0.93 12 31 6.4 6e+02 1.4 0.0 2 23 859 881 859 881 0.83 13 31 0.01 0.96 10.2 0.0 2 23 888 910 887 910 0.95 14 31 1.5e-05 0.0014 19.1 1.2 1 23 918 940 918 940 0.98 15 31 0.23 22 5.9 0.7 3 23 983 1005 981 1005 0.86 16 31 0.00024 0.023 15.3 3.3 1 23 1008 1031 1008 1031 0.97 17 31 0.016 1.5 9.6 0.7 2 23 1038 1060 1037 1060 0.95 18 31 0.0027 0.25 12.0 6.0 1 21 1122 1142 1122 1143 0.95 19 31 0.0031 0.29 11.8 1.8 2 23 1157 1178 1156 1179 0.93 20 31 0.15 14 6.5 1.1 1 23 1182 1205 1182 1205 0.95 21 31 0.0053 0.5 11.1 0.6 2 23 1212 1235 1211 1235 0.93 22 31 3.5 3.3e+02 2.2 0.2 2 23 1243 1265 1243 1265 0.94 23 31 4.1 3.9e+02 2.0 0.0 2 23 1272 1294 1271 1294 0.87 24 31 0.13 12 6.7 3.0 2 23 1303 1325 1303 1325 0.96 25 31 2.6 2.4e+02 2.6 1.7 2 23 1331 1353 1331 1353 0.92 26 31 0.06 5.7 7.7 0.4 1 23 1424 1447 1424 1447 0.95 27 31 0.0059 0.56 10.9 2.8 1 21 1488 1508 1488 1509 0.94 28 31 0.32 31 5.5 1.3 2 23 1636 1658 1635 1658 0.94 29 31 0.91 87 4.0 1.1 2 23 1665 1687 1664 1687 0.96 30 31 0.79 75 4.2 2.5 1 23 1698 1720 1698 1720 0.97 31 31 0.0069 0.66 10.7 0.1 3 21 1733 1751 1733 1752 0.95
Sequence Information
- Coding Sequence
- ATGGAGCCGTCCAAGGAACGTTACAACGAGCTGTGCAGGCTGTGCGCCTCTTACGACGCCGTCAAAATGGATATCTTCGgaaatgagggaaaaaatcGTCAGCTCGTTGACAAAATACAAACTTGCCTGCCCTTCAAGATCGCTGAGGACGATCGACTTCCCAAGTGTCTGTGTTATCGATGTATGtacaatttggaaaatttttacgacttCAGAACGGCTTGCGTCAATGCCGTTGCTCTTCTGGAAAGGTGCCTCCCACCAGGGAGCACTGCCactgGTAAACAAATCGAAAATGGGGGTGAAAGTTATTCGGAGCTGCGCTCGGAGCTCctcaaggaaaaagaaaaaatgcccaTACTCATTCCCGAAGCCCCCATAGTAAATCCTAACGCCGCACTTGGAACACCGCCCAGACTGAATTCGGACGGCGAGGGAGAACACGAGATCGAAGAAATTCATAACGTCAGCGGGGCCGAGGAtgCTGTTGCCAAAGTCTTTGCGACCAGCTTCGAGGACGATCGCAAATCCGACGAGTACGAAATGGACATGGAGACTAATCCGagcgattttttggaaatgacTCCCATGGTCACCGAGGAACTCGACGATTCGAGTTCGAAAAAGACACAAGCctcgaaaacgagaaatttgatGGAAACTTTTCAACATACCTCCGAGCAACACGAAGTTTACGTTTGCTCGTTATGCAACAAAGCTTTTAGTTCAAAGGGTCACTTGTCGCTGCACGCGAGAATTCACGTCGGCGCGGGTGACGTTATCGGTGCCAAAGTCGTCACTGACGATCACACCTCCTACAAGAGACCTTATCAGTGCGATCTTTGCAACAAATCGTACTCGACAGCGAAGCATCGATGGGGACACGTTTCAACTACTCATCGAGGACATCCGGCCGTGACGTGTGCCTATTGTTCGCGAATATATTCGACACGTACGAATCTCGAGGAGCACATAAAATCTCGGCACACGGGTTTGCCGCCACCTCCGGAGTTGCCAGTGGCTTATGTGCAGCCGGACAATCGTTACAGATGTAAAACGTGTCCAAAGATGTACACGAACGTAACGGATTTGAACAAGCACACGAGAGTGTGCGCGAGTGACGTAGCCACCAAAGagaaacagcagcagcagcagcagcagcaacagcagccgatgaaaaaaatgcctcgGAAGAATAAGTCTCGGGTGGACACGTCCGATATCTCGAGCAGCACGAGCACAACCGACACCGAGGACGAGAGCAACAACGACTACAGAAGCGCCGAAGCGAAACTCTCGAAAAATCCACAACTAACGATCCTGAAACAGGCTCTTACGAAGGGAGGCGAAAATCTTAAGAGAGACTACGAGGATCGAAGGAGCCAAGCGAGCAGTGGTGCTGGCAACAACAAACCCCCTGCTGCCAAAGTTGCTCGAATAGAAAATAACGAGGCTCCCGTTCGGAAGCGATGGTACTGCGAGATGTGTCCGCAGAATTTCACATCCGTCGAAAAGTTGAAACAGCACGAGATGATTCACGACGCGGAGAGGCCTTTCGTCTGTATACTGTGCGAGAAGGATTTCGTTCTGAAAACTTCGTTGAGCAGGCACATTGTATCGAGCCACGGAGTCGATCCGACGCCCATTCTCGAGAGCGACAAATGTACGAAAAAGAGCGCGTTGGCCCAGGCGTggcggaaaaaattgataaaaactgaGGACGTCAGGACCGGACGGAAACGAGAGGCACCGAGTGATTCCTCCGAAGACGCCGACAGCTTCGCGCACGGGAATCTCGTCGAAATCGAAACTGTTTTCGTCTGCGAAATTTGCACGAGAGACTTTAACGATCGCGCTTCTCTCTGGCTACACATACGAGCCACCCACAAAGAATTCGCCGCTTTCGCTTGCGGAGTTTGCCTCAAAATCTGCTCCGACAATGCTCAGCTTTTGAATCACGTCAACATGTATCACGGCGGCTCGAAACTTTTGGTCTCCGAGCAAAGGCGATACAGCTGCACCATTTGCGGCAGGCAGCACGACTCTcgcaaaaaattaatcactcACGTTTCCATTCACAACGTCGACCCTGGATACGATCCTGCCAGTTTTGTTCAACTCAACGCCAATTATTACAACGAAAGTTTCAACAGCAACGAGGCCAACGATCACTTGATGGACTTTGACCCCGAAGACGGCGACAAAGTCGATTGTTATATTTGTTTCAAATCTTTTCCTAACGAGGATCACTTGATTCGCCATCAACGAAACGCTCACAAGtcCGAAGGCCTCGTGCCGGGCAGCCAAGTCGCGATACCGACCAACAACGGACCCGCCGCCGTTGCCGTCCCTGGCGTGAACGGAACCAAGGCGCAGTATCATTTGTTCTTTGTTTGCGAACTCTGCGGTAGCTCGCATCCTAGCAAATGGGAACGATGGCTTCACGTCAGTGGCAATCACAGCGAAGATCCATCGATGAGGTGCGAACGAGAGGATTGCGGCAAGATATTTGCGACGAAGGCGTTGCGAAACGAGCACGCGCAGCACCACCTGATCCAGGGTTCGTCGCCAAACACTTGCGAAGTGTGTGGCAAGCTGTGGGGAAGTCGAGTGGATTATTGGAAGCACGTGATGGGTGTGCATTCGGACACGGTGCCCCTGATTTGTGGGGTTTGTTTGAAAGTGTTTCCGGACGTGGCTCAGCTGAGTAGCCACGTGAAAACGAATCACTGGCCGTTGACGAACGGAGATTTCAGTTGCGACATTTGTGGCCGTCCGTATTCGAACAAATCGAAGATGTCTCGACATCGGAAGATCCACGGAGTCGTGGAGGTCGAGCCGGGAGTGGGAAACAGCGGCGAAGTGACTGGGAGAGCTCCGGCTGACCTCCGGAGCGAGACGCGCGGCTTCTGCGAGGATAAGAGCCCCAAGGAAGTTGAATTGACTTGCGAATTGTGCGCGGATTTGAGTTTCGAGAGCTGGCAATCGCTGTGCAATCATCGGCGAATGATTCACGGGCTTTTTCCTTGCGATCTCTGCAACAAATGTTACGGGCGAACGTCTCATCTGTGGAAACACGTGAACCGAGTGCACAAGGGACACGAGGACGTGACGTGTCGTTATTGCATGAAAACGAGTGCCTCGAAGGACCACCTGATGGCGCATATTGCAAAAATCCACCGTTACGAGCCGGAGAACAAGTTGGAAATGTTGATGGTCGTGGGAGACGCAGTGGCGCCGATAACGGGCGAGGACGAGGACGGAGAAGAGGAGCACGAGCTGCGccgaagacgaagaagaagaggagacATCGGAGCGATTGGCGAGGACGAGGAAACCGGAGGAACCGTCGGCGGGGGCGTGCACCACTGCGACAAATGCCAGAAAAGTTTTCACAAGCGTTATTTGCTGCGACGCCACATGAAAGGCTGTCAAAATTACCGAAAAGACCCTGGCGCGTTGCTCACGCGTTGTCGAGCTTGCGAAAGGATTTTCAAGGACCGTGCCAGCCTCCAGAAACACATAGAGAATCATCACAGCGAGTACACGTGTCACTTGTGCAACGAGACGGTTACCTCGAAGCTGGGAATCATGACGCACAATCGCGTCAATCATCTTCATCATCCAGACCTCACTTGCGAGAACGGCAACTGCAGAAAGTTGTTCCGGACCAAGGAGGACCTCGAGGCTCATCGGAAGGACCACAAATATCACAATACACCGAACGTCTGCGATTTTTGCGGCGACACGGtcgagaataaattgaaactgAAGATGCACGTTTTGTCGCTGCACCGAAACGAAATCGGTGTGTCCTGCGGCGTTTGCCTCATTCCCATGAAAGATCCGAAGGATCTGAAGAAACATGTCGAGGACGAGCACGAAGGAGTTTTGCACAAACCGAACACTTGTCAAGTTTGTGGGAAGCGTTACGCCTCCAAGTGGAAAGCTTTTGATCacacgaaaaaatgccatggaaaagtttttcgcaCGTGCAAACAATGCCTCGCGGTGTTTACCACCGACGCGGACATTCGGCATCATTACGAGCACGTCCACAACGTCCCGAAGGACCAATTGGCCGGGTTTGAGAATCGACTGCTCGATTCTCGGGCCGAAGAGTGCGACGCGATCGTCAAGGACGAGCCCGAGGATTACGAGTACGAAGTGCAACGCGAAGGACCCGCCGCGGGTACTCTTTGCGACGAGAACGAGGCGTACAACTTCAAACGTCGGAAAAGCAGCCTCGCCAACAACAGCCGTCACACTCACGACTGCGAAATTTGTCCcgagatttttctcaatcgagAGACACTCTCCGATCATTACAGAAATGTTCACAATACCGATCCTGACAGAATGTTCAAAAGGATCAAGCTGGAGAGAGGCGAAGGAGGAAGATTCACGAGCACCGCATCGAGCGGCACTTCCAAGAGGATGATGATGAGGGAACGCGAGAATTTCGAGTGTCAAAATTGCTCCAGACAGTTTTGTACGAAAAGTCTTTTTTGGAACCACACGAACGTTTGCACGAGGCGAAACTCTGCAAACAAGGAAGATCCGCGATCGTCCGGGTCGTTGGGCGGTCAATCGTCCTCGATTCTCGAGGCTCATCTCAAAAACAACAATCGCATCAAGAAAGAACCGAGCGATGTTCCCAGCCTCGACGAGACCAATTTGAACATTCCGGATTTTAATCTCTTCGAGGATATCAACATGCAGCTCTCCGAGCAGCAAAAACCCATCCCCAACCTGATGCCGCTGTCCGAACTGAGACGCGCGCCCGGCGGTGCCAGTAACGTTGGCCCCCTGCTCCTCTTACCCTCCGCGCACGATAAATCCTTGAAAAAGGACACGAGAAAGGACTCGAGGAAGGTTTACGACGAGTCGACCAACACCGTTTGCGTCTGCGAGGTTTGCGGCAAACAGTGGCCCGCCAAAAAACATCTCTGGCAGCATTTGATTCGGTTTCATCGGACCGAGGCTGCGGTAACTTGCGGAGTTTGTCTCAAGCTCTGCAATAACTACGAACAGTTGGGACAACACCTGCGAAACACTCACGAGTCCATTTTGTCTCGCGAGGGCAATAATTTCACGTGCAAAACTTGCGGACGCTATCACAACGCGAGAAGCAAACTTTTGCTGCACATGAGCATACACATCAACAATGGTAATGACGGGGGCGCAGCTTCCTGGTGTCCAAAGTGCGAGAGGAgcttcgaaaacgaagaaaaactcaACGAGCACGCTCGAAGTTGCGACAAGAGCCAGCCCGTCTTCGAAGAGCACAGCGTCGACGTGGACACCGATCGTGAGACGAAGATCGAGGACGACAAGGGAAGTCTCATCGGCGATGGCGCCTCCCTCACCGGCGAGGACGAAGAGGAAGTCGATTTCTCGGATCGACGGGTACGGAGCCATTCCGAGAACACTGAAAACTCCGAGAGCAGCCGCGGCGGTGCCCGCACGAACAGCGACAGCGAGAGCAGCGACGAGGatcaggaggaggaggaggaggaggaggaagaagaagacaCGGAATCTCGCACCAACAGCCGAGCCACTGGTCCGGCGACTTGTCACTCGGAGAGCGAGGACGATCGCGACACCCGAGAGAAAAGTCCTGCAGACGTTCCTCCGGGTGAGACTCTCAAGGATGGCAAGGATATTGGCGAAGAAACTAGCAAATTGATAACCAAGAGTCCTGAAGAAGAAGATGAACGTGTggagacgaaggaaaaagcgAATCGGGCGTCGCCGGAAGTTgaacgagaaacgagaacCGAGAAAGTTCCATCGAGTGCGACGAACGatttagagaaaaatgatgCATCGACGGTCGAAGAACCACGTGCGATAAAAGAGGAGAACGAGGACgtcgaggacgaggacgaggacgatgaTGGACCGCCCATTTTGAGTCCAATGATGCCACTCTCGACGGAGAACGCGATCGAAGAGCGAGACGACGTCGCGAGTCACCGGCTGAGTCCAATGCTCTCGTTGAACGAcaccgaggaaaaaaatgctcgccCCGTGTCCTTGGAAGTGAAGAAATCCGTCAATGAATCTACGAGAAACGCTCAATCGTATCCACCGGTCAACGAACGGTTCTACGACGACGAGGACTGTGGCGAACGTTCCAACGAAGAATTGGCGTCCGATGAAGAACACGAGGACGATACACTCGCCGAAGAAAACGAGGAACTGGACGATGAGGACAGTCGAATCCACGTGGTTAACCCCGACGACGAATACCATTCCGACGACGATCGACCTCCCGACGAGGACCAAGaagacgaggaagaagaagaagaagaaaaagaagaagaagaacacGAGGAAGACGACCTGGACGACGATCACGAGGAACCAGAACTCGAGCACGACGtgcaggaggaggaggaggaggaggaggaggaggacgaggaagaagaagcgGAAGCGGAAGCggacgaggaagaagaaggaaCTGAGGAAAACTTGGAAATGGACCAGGAGCCTGTCGATGAGATGGAAGAGGAGGGTGTAGAAATAATAGAAGAAGACAACGAGGTCGACGAGGAGAACGAGGAACTAGAGGACGAAGAGTTATCAGCGGAGAATTCTTTGCAGATCCACAATTTGGACGGAACCGTTTTGATGGTAGCGAACGATGCGGACGGTAATCAAATTCTGATCCAACGAAACGTCTCGGACATGGAAAACGACGAATCGATCGGAGCGCTGACCGGTTACATttacgaggacgacgacgagtaCGATTTCACGGGCTTCCAAGTCCAAGAGGCAGGAATCCACGTGGAGGACCCCAGAAGAGTCGCCGACAGCGAAGACGACGAagaggacgaagaagaagaggaaattCTCCTCGAGCAAGATGACGACGAGAGGGAAGTGACGGAGGCTGAAGACGACAAGGAAACCCGACAAGATTATCCCGACGAATCGAATCACGAGGAAATGGAAATCTCgaccgacgaaaaaaatgagcatgaCAACGACAAAGTGAGACAGGATCCGACATAG
- Protein Sequence
- MEPSKERYNELCRLCASYDAVKMDIFGNEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPGSTATGKQIENGGESYSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEGEHEIEEIHNVSGAEDAVAKVFATSFEDDRKSDEYEMDMETNPSDFLEMTPMVTEELDDSSSKKTQASKTRNLMETFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGAKVVTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRTNLEEHIKSRHTGLPPPPELPVAYVQPDNRYRCKTCPKMYTNVTDLNKHTRVCASDVATKEKQQQQQQQQQQPMKKMPRKNKSRVDTSDISSSTSTTDTEDESNNDYRSAEAKLSKNPQLTILKQALTKGGENLKRDYEDRRSQASSGAGNNKPPAAKVARIENNEAPVRKRWYCEMCPQNFTSVEKLKQHEMIHDAERPFVCILCEKDFVLKTSLSRHIVSSHGVDPTPILESDKCTKKSALAQAWRKKLIKTEDVRTGRKREAPSDSSEDADSFAHGNLVEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNANYYNESFNSNEANDHLMDFDPEDGDKVDCYICFKSFPNEDHLIRHQRNAHKSEGLVPGSQVAIPTNNGPAAVAVPGVNGTKAQYHLFFVCELCGSSHPSKWERWLHVSGNHSEDPSMRCEREDCGKIFATKALRNEHAQHHLIQGSSPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVAQLSSHVKTNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGVVEVEPGVGNSGEVTGRAPADLRSETRGFCEDKSPKEVELTCELCADLSFESWQSLCNHRRMIHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCMKTSASKDHLMAHIAKIHRYEPENKLEMLMVVGDAVAPITGEDEDGEEEHELRRRRRRRGDIGAIGEDEETGGTVGGGVHHCDKCQKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSEYTCHLCNETVTSKLGIMTHNRVNHLHHPDLTCENGNCRKLFRTKEDLEAHRKDHKYHNTPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHEGVLHKPNTCQVCGKRYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDADIRHHYEHVHNVPKDQLAGFENRLLDSRAEECDAIVKDEPEDYEYEVQREGPAAGTLCDENEAYNFKRRKSSLANNSRHTHDCEICPEIFLNRETLSDHYRNVHNTDPDRMFKRIKLERGEGGRFTSTASSGTSKRMMMRERENFECQNCSRQFCTKSLFWNHTNVCTRRNSANKEDPRSSGSLGGQSSSILEAHLKNNNRIKKEPSDVPSLDETNLNIPDFNLFEDINMQLSEQQKPIPNLMPLSELRRAPGGASNVGPLLLLPSAHDKSLKKDTRKDSRKVYDESTNTVCVCEVCGKQWPAKKHLWQHLIRFHRTEAAVTCGVCLKLCNNYEQLGQHLRNTHESILSREGNNFTCKTCGRYHNARSKLLLHMSIHINNGNDGGAASWCPKCERSFENEEKLNEHARSCDKSQPVFEEHSVDVDTDRETKIEDDKGSLIGDGASLTGEDEEEVDFSDRRVRSHSENTENSESSRGGARTNSDSESSDEDQEEEEEEEEEEDTESRTNSRATGPATCHSESEDDRDTREKSPADVPPGETLKDGKDIGEETSKLITKSPEEEDERVETKEKANRASPEVERETRTEKVPSSATNDLEKNDASTVEEPRAIKEENEDVEDEDEDDDGPPILSPMMPLSTENAIEERDDVASHRLSPMLSLNDTEEKNARPVSLEVKKSVNESTRNAQSYPPVNERFYDDEDCGERSNEELASDEEHEDDTLAEENEELDDEDSRIHVVNPDDEYHSDDDRPPDEDQEDEEEEEEEKEEEEHEEDDLDDDHEEPELEHDVQEEEEEEEEEDEEEEAEAEADEEEEGTEENLEMDQEPVDEMEEEGVEIIEEDNEVDEENEELEDEELSAENSLQIHNLDGTVLMVANDADGNQILIQRNVSDMENDESIGALTGYIYEDDDEYDFTGFQVQEAGIHVEDPRRVADSEDDEEDEEEEEILLEQDDDEREVTEAEDDKETRQDYPDESNHEEMEISTDEKNEHDNDKVRQDPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00439674;
- 90% Identity
- -
- 80% Identity
- -