Hdol006124.2
Basic Information
- Insect
- Hyposoter dolosus
- Gene Symbol
- ZNF605
- Assembly
- GCA_963921915.1
- Location
- OY998131.1:18663476-18665847[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00015 0.014 15.9 3.5 1 23 17 39 17 39 0.96 2 15 0.00013 0.013 16.1 1.3 1 23 45 68 45 68 0.96 3 15 1.2e-05 0.0011 19.4 3.2 1 23 79 101 79 101 0.98 4 15 5.5e-06 0.00052 20.5 1.2 1 23 105 127 105 127 0.98 5 15 6.5e-07 6.1e-05 23.4 1.2 1 23 133 155 133 155 0.98 6 15 5.7e-06 0.00054 20.4 1.9 1 23 161 183 161 183 0.98 7 15 0.00039 0.037 14.6 0.6 1 23 340 362 340 362 0.96 8 15 6.1e-05 0.0058 17.2 4.6 1 23 368 390 368 390 0.95 9 15 0.002 0.19 12.4 0.2 1 23 395 418 395 418 0.97 10 15 0.00011 0.01 16.4 3.3 1 23 424 446 424 446 0.96 11 15 0.00012 0.011 16.3 0.7 1 23 452 475 452 475 0.97 12 15 0.00018 0.017 15.7 0.5 1 23 486 508 486 508 0.96 13 15 4.7e-06 0.00045 20.7 1.5 1 23 512 534 512 534 0.95 14 15 1.8e-06 0.00017 22.0 0.3 1 23 540 562 540 562 0.98 15 15 2.5e-06 0.00024 21.5 1.4 1 23 568 590 568 590 0.98
Sequence Information
- Coding Sequence
- ATGGCAGTGAGGTGTCACATAAGACGAGTGCACTTGCGAGAACATCCTTTCACTTGTGAACAATGTGGAAAACGTTTCATGACGAACTGCGACCTAAAAGACCACACGACTCTTCACCTGGGCGTGAAATCTTTCATCTGCGAGAGCTGCGGCAAAGGATTCATGCGGCAATCGTCTCTGGGCCACCACAATCGCCGAGTCcacggaataataaaaaagatactGTCGAAAATGCACAAATGCAATGTTTGCGAGAAGAGTTGCTCGTCCGAGTACGCGCTGCGAATTCACATGGAAACacacacgagaaaatattattgcGGCGAGTGTGACAAGGAGTTCGTTAACAAGACGAGCCTCCAATTGCACAATCGGAAACACACCGGCGAACGTCCTTTTCAGTGCGACAAATGTCCCAAAAGTTTCACCCGCTCCAGTGCCTTCGTTGTCCACAAATTAACTCACACCGGAGCCAGACCTTTCGTTTGTGATATTTGTGGCAAAAGTTACACCCAAAGGACTACCATGATGTCCCATCGGAAAAAACACCCCGGAAATCATCCCAGGCCACCGCCCATTTCGCTGGCCAAACTCCTCCAGTTCATTGCGCCCGACCCTCTGGGGCCAGATTTTCTCACGGTAAAGATAATGGACGATTTCTTTCGAATCCCGAAATCTCTGTGCTACTTGATGGTGAAAGAACCGCTGCTGGAACGAGGAAACAAAGTTTTGGCGGGAGAATTGAGCAGCGGAGGGAAAGGTGAggcgaggaggaagaaaaatgcaaaattcaagGTGAGACCAGGGATTTCTGAAATTCTCGGGGAGACTGTGAAGAAGCAAAGTCCTGGAGACGAGGGCAGAGATCGCGAAGACTCGTCAGGGCAAAAGGAAAATGGCGGGGACGAAAAACAGCCTCAAGACCTCGAGGACGTTCCCCTGGTTGTTCGCCAGGACAACGAGCTCCGAAAGTCCAGGGCAGACAAGAAACCCGAAAAGAAATGCGAGCCTCTGAGCTTCGAGTGCGAAAGTTGCAGCCTGACGTTTGCCAGGAAGCGAGAATACACGATCCACATGGTGAATCACAGTACGTTGAGATCTCACAAGTGTGAGATTTGCGATAAAGCATTCAAGAGGAAATCTGAGCTCAAGTGTCACGTGCAGCTGCACAGCGGGGTAAAGTACAACTGCGACGAATGCGATTTTGTGACATCGAGTAAAGTAGCAGTTCGTTATCACGTGCGACGAGTGCATCAGCGTGACTTTCGTTACAAATGCGAAAAGTGTGACAAGAGTTTCATGTCGAATTGCGAGCTCAAGGACCACGGGACGAGCCACTCGAGCACAAAGAGTTTCATCTGCGAAATGTGCGGCAAAGCTTATCTCCAAAAGTCTCATCTCGGTGCCCACAAGCGCACGGTCCACGGGGTCGTCCTGAAAGTCTTGACGAAGGAGCATCGTTGCGAAATTTGCAACAAGAGTTTCGTCTCCGAGTACATATTGCAAAATCACATTGGAATTCATTCTCGGAAGTTCCTCTGTCCGCACTGTGGCAAAGAATTCGCTAACAATCAGTCTCTCACGATGCACAATCGTATGCACACCGGGGAACGTCCTTATTCCTGCAAAATGTGCGACAAGTCCTTTGTGCGATCGAACGCTCTCGCCGTCCACGAACTCACTCACACTGGCAAGAGACCATACGTTTGTGATCTTTGTGGGAAAAGCTTTACTCAGCGGAGCACGATGATGGGACACAGGAAAAAACACCCGGGCATTCATCCCCCACCGCCTCCTACCCTCTTGAGCAAACTGGACAATTCCATCGATTCTAATTCCTGA
- Protein Sequence
- MAVRCHIRRVHLREHPFTCEQCGKRFMTNCDLKDHTTLHLGVKSFICESCGKGFMRQSSLGHHNRRVHGIIKKILSKMHKCNVCEKSCSSEYALRIHMETHTRKYYCGECDKEFVNKTSLQLHNRKHTGERPFQCDKCPKSFTRSSAFVVHKLTHTGARPFVCDICGKSYTQRTTMMSHRKKHPGNHPRPPPISLAKLLQFIAPDPLGPDFLTVKIMDDFFRIPKSLCYLMVKEPLLERGNKVLAGELSSGGKGEARRKKNAKFKVRPGISEILGETVKKQSPGDEGRDREDSSGQKENGGDEKQPQDLEDVPLVVRQDNELRKSRADKKPEKKCEPLSFECESCSLTFARKREYTIHMVNHSTLRSHKCEICDKAFKRKSELKCHVQLHSGVKYNCDECDFVTSSKVAVRYHVRRVHQRDFRYKCEKCDKSFMSNCELKDHGTSHSSTKSFICEMCGKAYLQKSHLGAHKRTVHGVVLKVLTKEHRCEICNKSFVSEYILQNHIGIHSRKFLCPHCGKEFANNQSLTMHNRMHTGERPYSCKMCDKSFVRSNALAVHELTHTGKRPYVCDLCGKSFTQRSTMMGHRKKHPGIHPPPPPTLLSKLDNSIDSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -