Hdol004262.1
Basic Information
- Insect
- Hyposoter dolosus
- Gene Symbol
- lola
- Assembly
- GCA_963921915.1
- Location
- OY998130.1:21454172-21456228[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-09 1.2e-06 28.3 0.0 8 45 372 409 365 409 0.91
Sequence Information
- Coding Sequence
- ATGGATGAACCGAAAGCGTATTGTTTGCGATGGAGCAACCACCAGGCGAATCTGGTCTCGGTGATGGACGATCTGTTGGTGCATAAGAAGCTGACAGACGTGGCACTGGGAACTGACGACGGTCCTTTGATCTGGTGCCACAAAGTCATATTGGCGACATGTTCGCcatattttcgaaaacttttcataGACGCAACGTCTCATAATCCAATAGTCTTGCTAAAGGATACGAGCTATCCGGTGGTGAAGATTCTGCTGGAGTACATGTACAGGGGGGAGGTGAACGTGTCACAGGATAATGTGGCTGCTCTGTTGGATCTGGCTGCGTTGCTGCAGGTCAAGGGTTTGGCGATACGAGAGGAGTTGAATTTTGGAATTCCGTTAGCAGCGTCACCATCGCCGGTGGTTGGTAGTACGAGCAGCAATGGTTACGAAGAAGCTCATCCTCGAGAAGCTTCTGAGAGCTTGGGAGCGAATCCTAGTGAACGCGAGAGCGAGCGAAATAACGGTAACGCGAGGTTGAACGAAACGATCGAAGAGCCTGCTGGACGACAAGAAATTCATCGTAACCCGCTGCCACCTCTGATACAACGATGGCCGATGGCGCCGATGGCTTTGACCGAAGAACAACAATCCGCAGTCGCTGCCTTCGCCAATTTGCATCCTTTTCCCGCGACCTCTTATTCTCTATCCCAATTTTATCAAAACAGCTCCGAGTCTTCGTGCGCACGAAATCCGCACTACCAGACGCCTCAGAACCCACCAACCCCCAATATCCAAGACACATCGATCCTCAGGTCTGTCCTCAATCCTGAACAAATCGATCCAACTTTGAGATTACCTCCAAACCATCAAGAGCCTCGCAATCGACGTCATCGCAATCGTAAGAATCGACCTCCGCAACACCTTCAACGACGAAGCAGTGCCGATCTCCAGCAAATGCCTTCAACCTCTCAGGAAAGCGATCCAACTGCTCCTCTCGTGGAATCCGAACAAAACAGAACGACTCCTCAACCTTCAGCTGAACCCGTGCCATCCGTATCTGGTTACGGGGGGTCTCAGAGGCAAGAAAACAAACGttacaaaaaatacgatcCGAGAGACATATGGATGGCGATCGCCGAAGTCCAAAGAGGCTTGAGCGCCAACAAAGCAGCAGAAAAGTTCAAAGTGCCTTCGAGAACTCTGTACgacaagataaaaaagatgaaaaccTCAGAATCGCGAGACAAGCAGCGATCGAGACCATGCGAAACGGCGAGCAACGTTCCGAATGTGCAAAACGACGTTCAAGGCAACGCGACCACCGTCGGATTGGAAAACCCGGCCAACAGTCCGAACGAAGAAACAATGAGCGATTCGATCGACAACCCAATCTCCATGGTCGAGACTTCGTTAGGCGAAGATCGAGAACGATCAAACGTTCCCGAAAGATCGTTTGACTCCGATCGCGAAAGTCCACTGCCACGTGGTAACAGCAACGCCAATTCGCAGCCCGCGTCACCCGGTGAATTACAAATCGATCATAACGAAGAGGAAGCCGAAGATCTCACGGTAAGCCGTAGACCACCCAATATCCACGACGGAGTTTCTCCGAATAGCGATAACGAAGAAACCCTTTAA
- Protein Sequence
- MDEPKAYCLRWSNHQANLVSVMDDLLVHKKLTDVALGTDDGPLIWCHKVILATCSPYFRKLFIDATSHNPIVLLKDTSYPVVKILLEYMYRGEVNVSQDNVAALLDLAALLQVKGLAIREELNFGIPLAASPSPVVGSTSSNGYEEAHPREASESLGANPSERESERNNGNARLNETIEEPAGRQEIHRNPLPPLIQRWPMAPMALTEEQQSAVAAFANLHPFPATSYSLSQFYQNSSESSCARNPHYQTPQNPPTPNIQDTSILRSVLNPEQIDPTLRLPPNHQEPRNRRHRNRKNRPPQHLQRRSSADLQQMPSTSQESDPTAPLVESEQNRTTPQPSAEPVPSVSGYGGSQRQENKRYKKYDPRDIWMAIAEVQRGLSANKAAEKFKVPSRTLYDKIKKMKTSESRDKQRSRPCETASNVPNVQNDVQGNATTVGLENPANSPNEETMSDSIDNPISMVETSLGEDRERSNVPERSFDSDRESPLPRGNSNANSQPASPGELQIDHNEEEAEDLTVSRRPPNIHDGVSPNSDNEETL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00439629;
- 90% Identity
- iTF_00829649;
- 80% Identity
- iTF_00829649;