Hdol008290.1
Basic Information
- Insect
- Hyposoter dolosus
- Gene Symbol
- -
- Assembly
- GCA_963921915.1
- Location
- OY998133.1:4781196-4781818[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-10 3.1e-07 30.2 0.0 6 40 19 52 14 54 0.91 2 2 8.5 5.3e+03 -2.6 0.0 32 38 63 69 62 70 0.85
Sequence Information
- Coding Sequence
- ATGCTGTTCCCGGGGCAACGAATGTCTCAATCTCCGGAGGATCCGAAGCAAGTCGTTCTGGCAATGGAGGCTGTGAAAAACGGATTGTCCCTGAGAAAAGCGGCTGCTAATTTCGCCGTGTCGAAATCGAGTCTCCATCGTTACCTTCGTCTAGGTAACTGGATGTTTCAATGTCCCGGTTGTGGCACTTTCCATCGTCacaagaaaaatttgcttcgaCATTTGGCGGTCGAGTGCGGCAAGGAGCCAGGATTCAAATGTGGATACTGCGATCACAGATCcaagagaaaaggaaacgtCGTGGCTCACGTCAAACGAAGACATCCGGGTCTCGAGATCAAATGGATGATGgaagaaattttgtaa
- Protein Sequence
- MLFPGQRMSQSPEDPKQVVLAMEAVKNGLSLRKAAANFAVSKSSLHRYLRLGNWMFQCPGCGTFHRHKKNLLRHLAVECGKEPGFKCGYCDHRSKRKGNVVAHVKRRHPGLEIKWMMEEIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -