Hdol012630.1
Basic Information
- Insect
- Hyposoter dolosus
- Gene Symbol
- -
- Assembly
- GCA_963921915.1
- Location
- OY998135.1:16513837-16515961[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-12 1.1e-09 37.9 0.1 5 38 19 52 18 55 0.95
Sequence Information
- Coding Sequence
- atggtccaaaaatataaaagaaagaCTAATCAACAGTCATGGGAGAAATTATCGATGGCAAAAGCCATTCAAAAAGTCGTCGATGGAGAATTATCTTATAGAGAAGCTGCTGAGCGATATAACGTTCCGAGATCGACACTTGCTCGACGAGTGAAAACGTTCAAACTCAATCCTGAGATGGAATTAGCGATTAAAAAAGGTTTAGGAAGATTCAAAACTACCTTCAACCCCGAACAAGAACGGGAAATGATAAAACATTTGAAGGAAATGGAAGAGAAATTCCATGGACTCACTCCTCGAGAGTTCAGATCGCTGACGTATCAAATcgccgagaaaaataatgttaatcACCATTTTGTCGGTGGTATGGCCGGAAAAGATTGGATGCGGTCATTTCTACAACGGAACAAGCATTTAATATCATTGAGAAAACCTGAACCAACTTCCCTTGCGCGTGCAGCAGGATTTAACAGGACGGTAgtcgaaaactttttctcattaCTGATGTCTATAATCAATCGGCTTGATTTGACGCCAGACCGCATATGGAATGTGGACGAAACTGGTTGCTCGAGCGTGGCAAAACATCAGTCAAAGATTTTGGCCACAAAAGGCAAAAAACAAGTTGGCGTTATAACCTCGGCCGAGCGAGGAAAATTAGTTTCGGTGGAGATCTGCGTATCAGCAGCGGGTGTAGACTTGCCACCGCTCTTTATCTTTCCGCGCGTCAAAATGAAGCCAAGCTTACTGGATGGGTCTATGCCTGGAAGCTGGGGGCTGTGCCATCCAAGCGGTTGGATGCAGAGTGATTTGTTCTTTCAGTGGATCAAATGGTTTGTAAAAACCGTTAAACCCACTGAAGACAAGCCTGTGCTCCTCCTTTTGGATGGTCATGTGACACACACGCAAAACGCGGAAATGCTAGACTACGCTCGCCAAAACTCGGTCGAAATGTTGTGCTTCCCACCACATTGCACGCATCGTTTACAGCCGGTTGATGTTACATTAATGCGACCGATATCGATGGCGTATTCGgctgaaattaaaaaatggcatcGCTCTCATCCTGGACAATACGTTGTACCCGATGATATCGCTGGATTATTTAGCGCTGCTTTCCAACAAGCTGCTCGTCCCGAAACGATTATTAGAGGGTTCAAAGTGACAGGGATTTGGCccgttaataaaaatattttctcggaCAAAGCCTTCAGGCCTGCTGAAGTCACGAATCGCCCTTACGACTCTTCAGAGAACCCCGACGATATGGgcgaaaaaacgattgaaaacgAGGACGATCCGGATCAGTTATCCATGGACCGACTGAGCCAAAATTTTGCTCGAAGTCTTTCgatcaaagaaaatgaagaggcTCATTGCTCCCATTCTAATTTTCCGCGGAGTTTTGAGAAACCAAAATTATCCGACACAAATGATTCGAATggtttgaatgaaaatctgCTATCAGATTCTTCACTCGAATTGGATCTTGAATCACTCTCTAGGGAAATTGGAATACCATGCGAAAATCAAGACGCGTTTCTGGTTACTCCTCACGAGATTTTACCGATACCCTCCACGAGCGGCACTGGGCCGCGGAAAAACCGTCGTCGGGGGAAATCGGCGATTTTGACGAGCTCACCATATCTGTACGAGCTGGAAAATAACCGATCagcaacgaagagaaaaacaatgcCTCGCAAACCgggaaaaaagcgaaaagtaACGAACGTTGAAGAAGAAGTCGGCGAGGACGCAGTGTGTCCTTTTTGCGAGGAATTATACTCGGAATCGAGCGAAAGTTGGGTACAATGTTCTCGGTGCGAAACTTGGGCGGACTGTAAATGCGCTGGAGTTGAAGACGACGATGTGCATTATATTCGTGATTTTTGTAAGCTGTGA
- Protein Sequence
- MVQKYKRKTNQQSWEKLSMAKAIQKVVDGELSYREAAERYNVPRSTLARRVKTFKLNPEMELAIKKGLGRFKTTFNPEQEREMIKHLKEMEEKFHGLTPREFRSLTYQIAEKNNVNHHFVGGMAGKDWMRSFLQRNKHLISLRKPEPTSLARAAGFNRTVVENFFSLLMSIINRLDLTPDRIWNVDETGCSSVAKHQSKILATKGKKQVGVITSAERGKLVSVEICVSAAGVDLPPLFIFPRVKMKPSLLDGSMPGSWGLCHPSGWMQSDLFFQWIKWFVKTVKPTEDKPVLLLLDGHVTHTQNAEMLDYARQNSVEMLCFPPHCTHRLQPVDVTLMRPISMAYSAEIKKWHRSHPGQYVVPDDIAGLFSAAFQQAARPETIIRGFKVTGIWPVNKNIFSDKAFRPAEVTNRPYDSSENPDDMGEKTIENEDDPDQLSMDRLSQNFARSLSIKENEEAHCSHSNFPRSFEKPKLSDTNDSNGLNENLLSDSSLELDLESLSREIGIPCENQDAFLVTPHEILPIPSTSGTGPRKNRRRGKSAILTSSPYLYELENNRSATKRKTMPRKPGKKRKVTNVEEEVGEDAVCPFCEELYSESSESWVQCSRCETWADCKCAGVEDDDVHYIRDFCKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00829410;
- 90% Identity
- iTF_00829410;
- 80% Identity
- -