Basic Information

Gene Symbol
JARID2
Assembly
GCA_963921915.1
Location
OY998129.1:32286439-32293639[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7e-23 2e-19 69.9 0.0 6 89 1473 1554 1469 1554 0.94

Sequence Information

Coding Sequence
ATGGTATTGGGCAGAAAtgacaagagaaaaagaaaagaaggagatCTCGTGGATCTCATGGATCCGCTCTCCGAGTCGCCCAAGAgAACAAAAGTTCATGCGCAGAGAAAATTTGCTCAAGGCGCAGCTACGGTTTTCAGTCCGGCGCCGACGCTcgttaaagaaaaagaaaaaacaaaagcgcCCGTAGCCACTGAATTAATAACTCACAAACGACCGAATACCGAAGATTTTCTCACCTTTCTCTGCTTTCGTGGAACCTCTATACTGCCGCCGAGCTTGAATTTCTTCAACGTGGGCACTCGAAAGGAAAAGACGGAGAGCAAGAGTCAGAGCGGCAAGTCGGGGACAAAAGTGTCGCCGGCGTCGTCATTGGGAGCAAACGGGCCGTCGTGCGGCAAGGGAGAATCCAGCGGGACTATTCGGCGGAGCAACAAGGTCAAGAGTTTGACGAGcgttaagaaaaaagtggtgGCAAACGGTGTGCCGACGACCCTGAgtaaatacaaaatggcgacGTCGACGGCGCAGgcgttgaagaaaaagtatcTGGAGCAACGTTTGGCCAAACAGAGAATAAAGAACAAATTGAAAGCGTCGTGCGTGATGAGAACTCGCTCCTCGACCGATCACACGTCGGAGGAGAAGAGCGTTAGAAAAATACCGGCGAGAAAGTTGGTTGGGAGgacggagaaaaagaaacgaggagGTTTACGGAGCGGTGGGTTTGTCGAGAAGCCGAAAAAACTTGTAACGTCGAAAAGTTCGGGATCGAAGCAGCAGATGACGAGGAAAAGAGCGAGCGTCGtcaaggaggaggaggaggaggaggaggaggaggagtcGAGCGAGTCCGAGGACTCGGACAGCGCTTCGTTgtcggaggaggaggaggaagaggaggaggaggatgaggaggaggaggaggaggaggaggaggacgacgacgacgacgacgaagaggaggaagaaggaTCGAGAGCCAAGAGTTCGCCGATAATTCGAAAAGCGGTGACGAGCGCGACGAAAgcgatgcagaaaaaaatttgcacgaGAAGCAAATCGGAGATGAGAAGAATCACGAGATCTCAAATGGAAAGTTCGAGAAAGGGGAAACAAGTGGCCGCCGCGGGTGGTTTGTTGAAAAGACcaacgagaaaaacgaaagaggcAGCCGCGGTTTATATGGAAATATTGGGCCGGAAACTGGTGAGTCCCGAGCTCGATAACGAGGACAACGTTTCGGTGGACAGCTTTCCCGAGCTGCCGAATGCTAGACGCACTGCTCAGGCGGAGAATGAAATGAGAGCGAAAAGAAAGGCGGCCAAGGGAAAAGAGACCAAGCGACGAAAGGAGCAGCCCAAGAAGGATGAAACTATTGGAAGCAGAACGAGAACAAAGCCGGAAAAACTAATTCTGAAAAGTGGTAAAAGACGGACACTCCGAGTGAGGCGTTATTGCGAATTGGACAGCGAGGACGATTCGGAGAGTTCGGGAGAGCCGCCGGAAAAGCCTAAAGAATCTACGCCGCGTCGGGCCACCACGACCACCGGCACCAATCGAGTGAAAACAGCGGAGAAAGCCTCGCCGCGGAGTCTGCGCTCTTCGTCGAGGAACCAATCGGCTAAAACGGAAAGCGTCCTCGGTAATGTCACCGAAAGTCggacaaaagagaaaatcatCAAGCGTCCTGTTAAAGCGGCGACGGCGGCTGCGGAAAAAGCAACGCCGcgcaaggaaaaaattgtggaatccGAGGAGGAGGAATCGCTGGGAAATTTGTTGACCAAGATGAcgaagaacaagaagaagaagaagaagcagaagaagaagaagaagaaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaagaggagaaaTGCGTTAAATCGGGTAGCAAAGTAGAGTCGACCGAGAGGAAAGTAACGAACGCGGAAATATCGGAAAAGAAGGCGAGAGACGGAGAAACTCGAATCGCGTCTCAGGTGTCggacgacgaggaggaggaatCTTTTCGAGGATTTACCAAAAAGGCCATATCGAAAGTCCTGAATTCCTGCAACTCTCACGCAAGCGCCAATCTTTTGTCGAGCGAAGAAACGACCGCCGCCGGATCATCGAGTCAGGAAATTGCGAAAATGGAGATCGGCACAAAGTCGTCGGAGACGTCGCTCGAAAAATTGGTTATCGACGACTCGTCGAGAGAATTTCGGCCAATTTCGAGTGTGAAATCTTTTCAGGAGGCTACTGCTACGATTGTTTCGAAGAATGCGGAAGAAAATCATGCTTCGAGCGTCGAGCAGTCTTTGATTAAATTGGAGGAAAAGGGGAACGAGGCGACATCGGCATCGAACGAGGCGGCagcagcggcggcggcggcggcggcgacgaCGATAAATCTTATGGACATGCCATTCACGGGGGGTGTTCACGGTCGTAAAGCGCGAGTCAATATGTCGACGGAACAAATTGAGAAATGGTTGAACGAGAGTTCGATGGCGCGCGAAGAATCTCGTCAAAAATCCGACAACGACACgtccaacaattttcatcaGTTTGACGCGCCATCGAGCAAAATAAAATCCGAGAGCAGTCATTTGTCGATACCAACGAGAATTCAACACCTCGTACGTCCGGTGAACGTGACGATAccaaaattgattgaaaaatcggcGCGAGAACGTTCCAACaacaatcgtaaaaaaatgataacgaaTCTGGTGGAATTGGAACGTTTCTCGAGTCTGAGTGGGAAACAATTGGACACGCCGGTGccgaatagaaataaaataaacgcgGATATGAAAGAAATAATCAAGGGTCGAAGCAGCGTGGTCGCGAAAGCAGGGAGCAGAGAAAATCCGTCGATCGCGGGAGAGGAGAGCGACTGTGTTTCCAAATCGGATCAAAATTCGGTGGACGGTTCGTCGCcggataaaaaatcaacgccGGAGAAAAAGCCAATGTTTCAGCagcgaaaaacatttttgcctAAAGTTAAGGAACGGAAAACTGCGATTCCCAGTGCCAATGCCTTTTCACCGGAAAACGAGAGCAGCGTTTACGCTTTCGAGAGCGATACCGAAGTCCCCATAAACACACcgtttcgaagaaaattcaaggAACAAGCCAACAACAACGATGCTACGAATCACCTTCTCCAGACACCAGATTCCACCAAAACAACTCGTTGCCAAGTTTCTTGCTCGACCGAGACTATCGACAAATTCGTAGTGCccaaaagttttgaaaatacgTCGCAAGTTCAAGTTTTACCCTTTGATGGCGGCGTTACCGCTAATTGCGGTGCTTCGATCGCGGTTCAAGTCAATTTTGACCAGCCGTCGCCGCCGCACGTTCAAGCAGCCCCCCAGCAGCAGCGGCCACACcgccagcagcagcagcagcagcagcagcagcagcagcagcagcaacgagGACAAGGAGACGGGGTCAGTGGGGGAACGTTGGCAGAGGGAAGCGAATCGATTGGCCAACAGAAATGCACGGAAATATCGACGCAAACGgaaaattcgatcgagaaCGAGAACGAGGAGGATGGTGGTGGGCACGTTTTTTATATACCGTTGCAGAGCGTCGGTAGAAACGGACCGAATCTGGTTCAAGGTCAACAATTGATACAAGGAGTGGCGGTGAAATTGGGCACCGAAGGTCCCAACGGTCCGAATCAGAGGGTCCTCTTGAGGGCCCAATTAGTCACGAAACCAGCAATGTCCGTTGCTCGTTGTCCTCCCGTGGGTACCGTTCAACCGACCACTCGCAATCCACCAAATTCATCGAGCTCCTCCACCACTTCCGTTCTCGATCATCCGTACGCCGTTCTTGATCCCAGCCAGCCCTCCACTTCGACCACCAATTCGAACCCTCAAACCCCCGCCAGTACGGACTTGACGCTTGCTGCTCCTCCAACTTGTACCGCGACTAGACTCACTTGCCATCCTCCGTCGACGACTGTCCCCCACCACAATGAGAAAGCTACTACCAAATCACCGAAAAGTGCCCGGGAGAGAAAAGCCTCGGTCGATTCTACCAAAACTGCCAAAAGagtttcgGCCAAGTCGAGAcaaaaaatgtcggaaatttTGGCACCGTCGAACGCGACGATATTTCCAGGCTCGATCAATTCGAACGCGGAAGCTCGTCTCGTCGAGGCGCCAACTTTCCATCCGACGGAAAAGGATTTTCAAGATCCTCTCGAGTACATCGacaaaattcgatcgatcgcCGAGAAATTTGGCATCTGCAGAGTCGTACCACCGGCCAATTTCAAACCCGAGTGCAAAGTTTCGGACGACATGCGCTTCACCGCGTACAATCAATACGTACATCGCATGCTCCATCGTTGGGGTCCGAATGTCAAAGAAATGATGgctattaaaaaatatcttgcCACACAGAGTATCACTCTGACACATCCGCCATGGATCGGTGGAATGGAAGTGGATTTGCCGCATTTGTATCAAACCGTTCAGAGTCTCGGTGGTTTGAAGGAAGtcattgagaagaaaaaatggcaaaaggtTGCCGATGGTATGAAGATACCGAAATCTGCCCAAGATCGCGTCACCAAACTCGATGATATTtattgcaaatatttattgcCATACGACACTTTGTCGCCCGTGGAACGAGGCAATCTTTTCGACGACGTCGAGGAAGATtggaaaaggagagaaacaAAGACTATGCAGAGGCTCGATTGCCCATCGACCGAGAACGATgaagacgaggacgaggacagTTCGGACGAGATAGAAGAATGCATTATCAAAGGTCGGAATATGCCGTTGAACGCATTTTATCGTATCGCACGGAATACTCAACGTATGTGGTTCGGTGAAAATCAACGTCCCGCTAGCGAGGCCGAAGGCGCATCGGCGATCGAGGTCGAGGCTGCCTTTTGGAAACACGTCGCTGAGAGAAAACGTCACGTTTGCGTCCACGCAGCCAGTATCGATTCCAGCGGACGAGGATTTGGTTTTTCCGTCGCGAAGAACAGTCCCTTCGCCAGACATCCTTGGAATCTCAAAGTTCTTACCAACAACGCCGGCTCGGTTCTTCGGGCTCTGGGCCCTCTGATGGGAGTGACCGTGCCGACGCTCCACGTGGGAATGCTCTTTAGCGCTTGCTGTTGGTATCGCGATCCTCACGGACTTCCCTGGATCGAGTACCTTCACAcgggagcgaaaaaaatttggtacgGAATTCCGGACGAGCACAACAATAATTTCCGCGAAGCACTCTCGAAAATGGTGCCTCGCTATTGCAAGAAGAAAACTATATGGCTGCCGTCGGACACTGCCATGGTACCACCGGAATTATTAGTCAACAACGGTGTACCTCTGTGTCGTACCGTCCAAGAACCTGGAcaatttatcgtcgtttttccAAAAGCCTTTACATCCAGCATTTGCACCGGTTACGTAGTTTCCGAAAGTGTCTACTTTGCCCAGCCTGCTTGGCTCGAAAACGCCGAACAAGTATTCAAAgatTTACAAGACAGCTGCGAGCCATCGATATTCTCCTTCGAGAGACTTTTATTTAGCATTATTAATGATTCTCGTTCTCATTACGATGTACTAAAACAgATCATGCCGGTTGTGATAAAGATTCGAGAACGCGAGCTCGAATACAGAAAACAATTGGAGTACATTGGATTgagggagaaggaaaaattacCACTGCCAGGTacgggaaaaggaaaaaaggggaaaaaaatcaaggaggAAGACGGTGACTTTGAGTGTGAAACCTGTCGAGCTAATTTGTTCGTTTCTCTCGTGAATAATTCGCAAGACGATAGCGTCTATTGTCTGCCGCACGCTCTTCAGCTCATCGTGCGGAAGAAACAAGTACTCAAGCATTGTACTCTCATGTACACGTACACGGAGGACGAATTGGATGATTTGATACACAAGTTGGAAGATAGGATCGAAGCCAAGTCGAAGAAATCTAATCAAATCAGGCAATCCAAATAG
Protein Sequence
MVLGRNDKRKRKEGDLVDLMDPLSESPKRTKVHAQRKFAQGAATVFSPAPTLVKEKEKTKAPVATELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGTRKEKTESKSQSGKSGTKVSPASSLGANGPSCGKGESSGTIRRSNKVKSLTSVKKKVVANGVPTTLSKYKMATSTAQALKKKYLEQRLAKQRIKNKLKASCVMRTRSSTDHTSEEKSVRKIPARKLVGRTEKKKRGGLRSGGFVEKPKKLVTSKSSGSKQQMTRKRASVVKEEEEEEEEEESSESEDSDSASLSEEEEEEEEEDEEEEEEEEEDDDDDDEEEEEGSRAKSSPIIRKAVTSATKAMQKKICTRSKSEMRRITRSQMESSRKGKQVAAAGGLLKRPTRKTKEAAAVYMEILGRKLVSPELDNEDNVSVDSFPELPNARRTAQAENEMRAKRKAAKGKETKRRKEQPKKDETIGSRTRTKPEKLILKSGKRRTLRVRRYCELDSEDDSESSGEPPEKPKESTPRRATTTTGTNRVKTAEKASPRSLRSSSRNQSAKTESVLGNVTESRTKEKIIKRPVKAATAAAEKATPRKEKIVESEEEESLGNLLTKMTKNKKKKKKQKKKKKKEEEEEEEEEEEEEEEEEEEEEEKCVKSGSKVESTERKVTNAEISEKKARDGETRIASQVSDDEEEESFRGFTKKAISKVLNSCNSHASANLLSSEETTAAGSSSQEIAKMEIGTKSSETSLEKLVIDDSSREFRPISSVKSFQEATATIVSKNAEENHASSVEQSLIKLEEKGNEATSASNEAAAAAAAAAATTINLMDMPFTGGVHGRKARVNMSTEQIEKWLNESSMAREESRQKSDNDTSNNFHQFDAPSSKIKSESSHLSIPTRIQHLVRPVNVTIPKLIEKSARERSNNNRKKMITNLVELERFSSLSGKQLDTPVPNRNKINADMKEIIKGRSSVVAKAGSRENPSIAGEESDCVSKSDQNSVDGSSPDKKSTPEKKPMFQQRKTFLPKVKERKTAIPSANAFSPENESSVYAFESDTEVPINTPFRRKFKEQANNNDATNHLLQTPDSTKTTRCQVSCSTETIDKFVVPKSFENTSQVQVLPFDGGVTANCGASIAVQVNFDQPSPPHVQAAPQQQRPHRQQQQQQQQQQQQQQRGQGDGVSGGTLAEGSESIGQQKCTEISTQTENSIENENEEDGGGHVFYIPLQSVGRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQRVLLRAQLVTKPAMSVARCPPVGTVQPTTRNPPNSSSSSTTSVLDHPYAVLDPSQPSTSTTNSNPQTPASTDLTLAAPPTCTATRLTCHPPSTTVPHHNEKATTKSPKSARERKASVDSTKTAKRVSAKSRQKMSEILAPSNATIFPGSINSNAEARLVEAPTFHPTEKDFQDPLEYIDKIRSIAEKFGICRVVPPANFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPVERGNLFDDVEEDWKRRETKTMQRLDCPSTENDEDEDEDSSDEIEECIIKGRNMPLNAFYRIARNTQRMWFGENQRPASEAEGASAIEVEAAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKKKTIWLPSDTAMVPPELLVNNGVPLCRTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPAWLENAEQVFKDLQDSCEPSIFSFERLLFSIINDSRSHYDVLKQIMPVVIKIRERELEYRKQLEYIGLREKEKLPLPGTGKGKKGKKIKEEDGDFECETCRANLFVSLVNNSQDDSVYCLPHALQLIVRKKQVLKHCTLMYTYTEDELDDLIHKLEDRIEAKSKKSNQIRQSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00439247; iTF_00828560;
90% Identity
iTF_00828560;
80% Identity
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