Basic Information

Insect: Hyposoter didymator
Gene Symbol: -
Assembly: None
Location: scaffold652:149501-161362[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.5 1.3e+02 3.2 4.2 2 23 227 249 226 249 0.96

2 17 0.00063 0.054 13.9 1.3 1 23 320 342 320 342 0.98

3 17 0.0043 0.37 11.2 1.0 1 23 391 413 391 413 0.98

4 17 0.00056 0.047 14.0 0.8 1 20 479 498 479 500 0.93

5 17 3.5e-07 3e-05 24.1 0.1 1 23 619 642 619 642 0.96

6 17 0.022 1.9 9.0 0.2 1 23 648 671 648 671 0.92

7 17 0.0079 0.68 10.4 0.1 3 23 681 702 680 702 0.95

8 17 0.0011 0.097 13.0 0.9 3 23 712 732 710 732 0.92

9 17 0.1 8.7 6.9 0.1 2 20 809 827 808 827 0.95

10 17 0.13 11 6.5 0.0 2 23 847 868 846 868 0.96

11 17 3.5e-05 0.003 17.8 1.5 2 23 888 909 888 909 0.98

12 17 0.015 1.3 9.6 0.8 1 23 931 954 931 954 0.93

13 17 1.7 1.4e+02 3.1 0.1 3 23 1007 1028 1005 1028 0.83

14 17 7.3e-05 0.0062 16.8 0.4 2 23 1049 1071 1048 1071 0.94

15 17 0.13 11 6.6 0.7 1 23 1082 1106 1082 1106 0.97

16 17 0.14 12 6.5 0.1 1 23 1111 1134 1111 1134 0.97

17 17 0.00094 0.08 13.3 0.1 2 23 1165 1187 1165 1187 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.5	1.3e+02	3.2	4.2	2	23	227	249	226	249	0.96
2	17	0.00063	0.054	13.9	1.3	1	23	320	342	320	342	0.98
3	17	0.0043	0.37	11.2	1.0	1	23	391	413	391	413	0.98
4	17	0.00056	0.047	14.0	0.8	1	20	479	498	479	500	0.93
5	17	3.5e-07	3e-05	24.1	0.1	1	23	619	642	619	642	0.96
6	17	0.022	1.9	9.0	0.2	1	23	648	671	648	671	0.92
7	17	0.0079	0.68	10.4	0.1	3	23	681	702	680	702	0.95
8	17	0.0011	0.097	13.0	0.9	3	23	712	732	710	732	0.92
9	17	0.1	8.7	6.9	0.1	2	20	809	827	808	827	0.95
10	17	0.13	11	6.5	0.0	2	23	847	868	846	868	0.96
11	17	3.5e-05	0.003	17.8	1.5	2	23	888	909	888	909	0.98
12	17	0.015	1.3	9.6	0.8	1	23	931	954	931	954	0.93
13	17	1.7	1.4e+02	3.1	0.1	3	23	1007	1028	1005	1028	0.83
14	17	7.3e-05	0.0062	16.8	0.4	2	23	1049	1071	1048	1071	0.94
15	17	0.13	11	6.6	0.7	1	23	1082	1106	1082	1106	0.97
16	17	0.14	12	6.5	0.1	1	23	1111	1134	1111	1134	0.97
17	17	0.00094	0.08	13.3	0.1	2	23	1165	1187	1165	1187	0.96

Sequence Information

Coding Sequence: ATGAATGATGTCCTCGATGTGCGGAATGTTGGAAACGTGTGCAGATTGTGTCTCTCGTCGAAGGAGCCAAAATCATCGGTCTTCGCCGATCAAGCAGTCACGACGGTTTCGCTTGTGACCAAAATTCAAACTTGCCTTTCAATAGAGATCCAAACAAACGACAAATTATCAACGTCGATATGTTCAGAGTGTCTGAGAAGAGTGAACAAATGGCATTCTTACAAGGAGTATTGCCTGCGCTCTCAGCAGAAATTGAAGCAATGTCTCATTCCGCTGTCAGAGAGCGTGGGAAATATCAAGGTCGAACCGCCGGATTACGAGGAAGTGATGGAGGTAGGGTCAGCTGTGCCTCTGAGTTCGGACGAGGAAGCTGGGGAAGTGCAGGACGTTACAGGGGGGCCGGAGAATGTTGAGACGAGTCCAGCAGTCGCTTGGATCAAGAAGGAACCGACAGAGGGCGAGGAAAATCGAACGGCGTTTGTTGCAACAGAATCTGCTCGTAGTACAGATCTGTTGTTGAATCCAATGGCGGTGGCTGGTCACAGGGAAGAGAGATCGGCGGTGCTGGATTCGGAGGACCCACTGATCCCATTGGCGTTGAAGGAGAAGAAGGGATCGAAGAAAAAAACTCGACGAGGTCCCCTGACACATTATCGGGGCTTGCGCCGCTACAAGCAGAGATGCGCGTACTGTCAAATATATTTGCATTCGAAACACAGTTACGCAAAGCACATGGAACGTTTTCATAGCGGAAAACAATTGATTTCAAAAGGTTCACAATCGAACAAATTGGCAGGAGGCGACGAAAGTTTTGCGGCGGAGGAAAATTCATTGGTCGAGGAGGAAGGAGTCGAAACAGAAATGGAAGTAGAGGATGTGGAGGACGAATTGGTCAGCTTGGAAAAGGACTCGCCGTTGACACCGGTACAGCAAAACATAATAAGCCAATTGAAGACGTTCTCGTGTTACACTTGCGGAGTTTCTTTCAGCGATCGTCGGAGTACGTTGAATCACATTCGCCAGCATATGCCGGATTTGAGACCTTACACTTGTATAGCTTGTTTAACGGAATTCGCTGATCGTTCGGTTTACAAACTCCACTGTGGAGCGTCTTTCCAATGCGCGATGAAAATAGCATTGGTAGTTCCGGAGCACGGTACGGAGAAGTATTTCACTTGTAACATGTGCCTCAGATCATTGATAAACAGAAAAGAACTTTTGAGTCATTTGTCGCGTCATTCGGATCGTCAATACGAACAAATGATCGGAGAATCTTTTCGTCCTCCGCCTCGGCTCGAGCCAGCGCCTAATTTGCAAACTAAAACCATTAGTTCTTTGGCTTCGAGCTCAAAAACACCGGTTCGAAAGGCTGCAGTAGCGAAACGAGTACGAAGAATGCCCGCGCCTTACAACAACGGGGATCCAGCGTACAATCATCCGTGCAGCAACTGCGGAATGATTTACAAACACAAGCAAAACCTATCGCGGCACGTGTTACTTTGCAAAAACTTACCTGCCGAGTGTCGAGTGTGTTACAGATGCATCAATTGCGGCCTGACGTTTCTTGCATTCAACAAGTTTTACAACCACCTGTCGCAAGTCCATCACAAGAGAGACCACATCGTGTGTTATCGTTGCGACGCAAAGATCAAAACTCGCGATTTTGTGGCTCATTATCGCGAGCACTATGGCGATGGAGATGATCAATGGATCGAAGTGTCGCCAAGCCGTGTTGGTAAGAATATCGGAGGTGTTTCATCGCCGGGGTACAGTAAAGTCAACGTTCAGGAAAAGGAACAAACGAAGGAGAGGAACGATCCTCGTTTGTCCATAAAATCGGATCCGGGGGGTAATTTTGAGTGCGACACGTGTGGCAAAGTATTCGCGAACGCTCCAAACTTGAAGCGTCACGTACGAGCGGCGCACGAGGTGCACGGTCGTTTCAATTGTTTCACATGCGCGAAAACTTTCGTTCGTGAGGAGGAATGGACGGAGCACGTGGAATTGGAGCATAAACGATCCGCGGAGAAGGTTGAAAATTGTCCGCAGTGTTCATCGGTGTTCGAGAGTCCGCAAGAGCTCATGCTTCATCGTCGTGCCGTTCACGGGCTCGAGGATGAGGATCATCTCGCTTGTTACATATGCGGCAAAAAATTCGGCAATGAAACGTCTCTCAAGATTCACCGAGGTCATCATTTCCGGGTAAATTCAAGATTGAGCATAGCAAACGGAGGATTACAAGAGGCGGAGACGTACTCCGGGGTCGAAGTGACGACGACGACGACGACGACGACGGTAAACCGGTCAAGAACTCCGAGTCCAGTACGTAAAACCGATCAGTCCCGAACTCTCGGCTCACCGAGAGCGAGGAAATCTTTTCCAAATGGAAGTCCGCTCGTTGGTCGATTGGAACGCGGAGCCTTGCAGTGTCAAGTGTGTGACGATCGATTCAACGACGTGACCGACCTGCGAAACCACTTGTGGGAGGTTCATTGCGCACGTAGCAAGCCCGAGAAACCTTTTATCTCGGAAAAGCTGCAGTGCGAGTTGTGCACCAACGTTTTACCGGATGAGGAAAGTCTGGCGAGTCATTTGAAGTGGCACGAGAGAAATCCGATACTGAGCAACGGTGCTGCAGCGAAGCGTGAGCAGGCGCCGGCCCAGTGCGATTTGTGCGGAAAGTTTTACAGCTCGATTGCGAATCTTCGCAAGCACAAAAAGCGTCACAAAGCAGCACCGAGTATGGGAGGCAGCAGTCGTGGTAAAAAGCGTTGGGTCTTCAACGAAGGATTCCCTTGCGACGTATGTCACAAAATATTTGCCAGTAGGATGATTTTGAGTAAGCACAAATCAATGGCCCATGCAGTAACAACGAAAAAGCCAGGCAATCAATCGAAAGCACCATCGAGTAATCGTAAAGCCCCGACCGCAGTGAATAATTATGTAAGATCGCCAGTATCTTCACCACAGAAACGAAATTCGAATCCGGTTCTCGAAGACATTAAAAAATCAATAATTTGCAATCTTTGTGGTAAAACGATGGCGGACATCCGGATATTGGTGAAGCATCGTCAGGTGGTGCACAAAATAACAAACGACACAAACTTCGGTTTGGATTCTAATCACGCCAGTTCTCCTCAAGTCCCGTGCACCGATTGTCCAAAATTCTTCACCAACTTGGCGAACATGAGACAGCATTATACAAAGGTGCATGGATCAAGCGCCGGCGATCGAGCCACGCGTTATCGTTGTTCCTTGGACGGTTGTAACTTTGCGTTCGAGACACTGACGGCGAAGCGAACGCACGAGAAAAGTCACGCGAACGTTGTGTACACTTGCGCGTTGTGTCCGCGTCAATCTCTAAGTCCGTCATCAATGGCATCGCACATGTTGACGGCTCATCGCGCGAACCGCCCGCCGGGTAATGACAAAATGACTCTTTGCAAAAAAATTCATATTGACAAATACGTGGTTCGTGGAGCGAACGGAAGAAAGTGTCCGATCTGCGAGATAACTTACCCCAATTACAAAGCTCTTAAAATACATTATTTGAAGATCCACGAGGACGGTGTTTAG
Protein Sequence: MNDVLDVRNVGNVCRLCLSSKEPKSSVFADQAVTTVSLVTKIQTCLSIEIQTNDKLSTSICSECLRRVNKWHSYKEYCLRSQQKLKQCLIPLSESVGNIKVEPPDYEEVMEVGSAVPLSSDEEAGEVQDVTGGPENVETSPAVAWIKKEPTEGEENRTAFVATESARSTDLLLNPMAVAGHREERSAVLDSEDPLIPLALKEKKGSKKKTRRGPLTHYRGLRRYKQRCAYCQIYLHSKHSYAKHMERFHSGKQLISKGSQSNKLAGGDESFAAEENSLVEEEGVETEMEVEDVEDELVSLEKDSPLTPVQQNIISQLKTFSCYTCGVSFSDRRSTLNHIRQHMPDLRPYTCIACLTEFADRSVYKLHCGASFQCAMKIALVVPEHGTEKYFTCNMCLRSLINRKELLSHLSRHSDRQYEQMIGESFRPPPRLEPAPNLQTKTISSLASSSKTPVRKAAVAKRVRRMPAPYNNGDPAYNHPCSNCGMIYKHKQNLSRHVLLCKNLPAECRVCYRCINCGLTFLAFNKFYNHLSQVHHKRDHIVCYRCDAKIKTRDFVAHYREHYGDGDDQWIEVSPSRVGKNIGGVSSPGYSKVNVQEKEQTKERNDPRLSIKSDPGGNFECDTCGKVFANAPNLKRHVRAAHEVHGRFNCFTCAKTFVREEEWTEHVELEHKRSAEKVENCPQCSSVFESPQELMLHRRAVHGLEDEDHLACYICGKKFGNETSLKIHRGHHFRVNSRLSIANGGLQEAETYSGVEVTTTTTTTTVNRSRTPSPVRKTDQSRTLGSPRARKSFPNGSPLVGRLERGALQCQVCDDRFNDVTDLRNHLWEVHCARSKPEKPFISEKLQCELCTNVLPDEESLASHLKWHERNPILSNGAAAKREQAPAQCDLCGKFYSSIANLRKHKKRHKAAPSMGGSSRGKKRWVFNEGFPCDVCHKIFASRMILSKHKSMAHAVTTKKPGNQSKAPSSNRKAPTAVNNYVRSPVSSPQKRNSNPVLEDIKKSIICNLCGKTMADIRILVKHRQVVHKITNDTNFGLDSNHASSPQVPCTDCPKFFTNLANMRQHYTKVHGSSAGDRATRYRCSLDGCNFAFETLTAKRTHEKSHANVVYTCALCPRQSLSPSSMASHMLTAHRANRPPGNDKMTLCKKIHIDKYVVRGANGRKCPICEITYPNYKALKIHYLKIHEDGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00265967;
90% Identity: iTF_00439706;
80% Identity: -