Basic Information

Gene Symbol
-
Assembly
None
Location
scaffold95:1789714-1800812[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 6.4e-06 0.00055 20.1 1.0 1 23 232 254 232 254 0.98
2 31 0.0028 0.24 11.8 1.9 1 23 277 300 277 300 0.96
3 31 0.00021 0.018 15.4 0.5 2 23 307 329 306 329 0.96
4 31 0.00011 0.0091 16.3 0.6 1 21 349 369 349 370 0.96
5 31 0.0031 0.26 11.7 0.2 2 23 487 508 486 508 0.96
6 31 0.13 11 6.5 0.3 1 23 514 537 514 537 0.91
7 31 0.00012 0.01 16.1 0.1 1 23 603 626 603 626 0.96
8 31 0.0082 0.7 10.3 0.4 1 23 632 655 632 655 0.96
9 31 0.12 11 6.6 1.5 1 23 668 690 668 690 0.97
10 31 4.3e-05 0.0037 17.5 1.1 3 23 735 756 734 756 0.96
11 31 0.035 3 8.3 0.7 2 23 824 847 823 847 0.93
12 31 5.7 4.9e+02 1.4 0.0 2 23 856 878 856 878 0.83
13 31 0.0092 0.79 10.2 0.0 2 23 885 907 884 907 0.95
14 31 1.3e-05 0.0011 19.1 1.2 1 23 915 937 915 937 0.98
15 31 0.18 16 6.1 0.6 3 23 980 1002 978 1002 0.84
16 31 0.00022 0.018 15.3 3.3 1 23 1005 1028 1005 1028 0.97
17 31 0.015 1.2 9.6 0.7 2 23 1035 1057 1034 1057 0.95
18 31 0.0024 0.21 12.0 6.0 1 21 1123 1143 1123 1144 0.95
19 31 0.0028 0.24 11.8 1.8 2 23 1158 1179 1157 1180 0.93
20 31 0.13 12 6.5 1.1 1 23 1183 1206 1183 1206 0.95
21 31 0.0048 0.41 11.1 0.6 2 23 1213 1236 1212 1236 0.93
22 31 3.1 2.7e+02 2.2 0.2 2 23 1244 1266 1244 1266 0.94
23 31 3.7 3.2e+02 2.0 0.0 2 23 1273 1295 1272 1295 0.87
24 31 0.12 10 6.7 3.0 2 23 1304 1326 1304 1326 0.96
25 31 2.3 2e+02 2.6 1.7 2 23 1332 1354 1332 1354 0.92
26 31 0.055 4.7 7.8 0.4 1 23 1424 1447 1424 1447 0.95
27 31 0.0054 0.46 10.9 2.8 1 21 1492 1512 1492 1513 0.94
28 31 0.29 25 5.5 1.3 2 23 1640 1662 1639 1662 0.94
29 31 0.83 71 4.0 1.1 2 23 1669 1691 1668 1691 0.96
30 31 0.71 61 4.2 2.5 1 23 1702 1724 1702 1724 0.97
31 31 0.0038 0.33 11.4 0.2 3 22 1736 1755 1736 1755 0.97

Sequence Information

Coding Sequence
ATGGAGCCCTCGAAGGAACGTTACAACGAGCTGTGCAGGCTCTGCGCCTCTTACGACGCCGTCAAAATGGATATCTTTGGGAATGAGGGAAAAAATCGTCAGCTCGTCGACAAAATACAAACTTGCCTGCCCTTCAAGATCGCCGAGGACGATCGACTTCCCAAGTGTCTGTGTTATCGATGTATGTACAATTTGGAAAATTTTTACGACTTCAGAACAGCTTGCGTGAATGCCGTTGCTCTTCTGGAAAGGTGCCTCCCACCAGGGACCACCGTCACTGGTAAACAAATCGAAAATGGGGGAGAAAGTTATTCGGAGCTGCGCTCGGAGCTCCTCAAGGAAAAAGAAAAAATGCCAATACTCATTCCCGAAGCCCCCATAGTAAATCCTAACGCGGCGCTTGGAACGCCGCCCAGATTGAATTCCGACGGCGAGGGAGAGCACGAGATCGAAGAAATTCATAACGTCAGCGGGCCCGACGATGGTGTTGCCAAAGTCTTTGCGACCAGTTTCGAGGACGATCGCAAATCCGACGAGTACGAAATGGACATGGAGACGAATCCGAGCGATTTCTTGGAAATGACTCCCATGGTCACCGAGGAACTCGACGATTCCACTTCGAAAAAGACACAAGCCTCGAAAACGAGAAATTTGATGGAAACTTTTCAACACACCTCCGAGCAACACGAAGTCTACGTTTGCTCGTTGTGCAACAAAGCTTTTAGTTCAAAAGGTCACTTGTCCCTCCACGCGAGAATTCACGTCGGCGCGGGTGACGTTATCGGTGCCAAAGTCGTCACTGACGATCATACCTCCTACAAGAGACCTTATCAGTGCGACCTTTGCAACAAATCGTACTCGACGGCCAAACATCGATGGGGACACGTTTCCACAACTCATCGAGGACATCCGGCTGTGACGTGTGCCTATTGTTCGCGAATATATTCGACGCGTACGAATCTCGAGGAGCACATTAAATCCCGACACACGGGTTTGCCGCCGCCTCCCGAGTTGCCAGTCGCTTATGTCCAGCCGGACAATCGATACAGATGTAAAACGTGTCCAAAGATGTACACGAACGTAACGGATTTGAACAAGCACACGAGAGTGTGCGCGAGTGACTCAGCGACCAAAGAGAAACAGCAGCAACAGCAGCCGCTAAAAAAAATACCTCGAAAGAACAAGTCTCGCGTGGACACGTCCGATATGTCGAGCAGCACGAGCACAACCGACACCGAGGACGAGAGCAACAACGACTACAGAAGCGCCGAAGCGAAACTCTCGAAAAATCCACAATTAACGATCCTCAAACAGGCTCTTACAAAGGGAGGCGAAAATCTCAAGAGAGACTACGAGGATCGAAGGAGCCAAGCGAGCAGTGGTCCTGGCAACAACAAACCTCCTGCTGCCAAAGTTGCTCGAATAGAAAATAGCGAGGCTCCTGCTCGGAAGAGATGGTACTGCGAGATGTGTCCGCAGAATTTTACTTCCGTCGAAAAGTTGAAGCAGCACGAGATGATTCACGACGCGGAGAGGCCTTTCGTCTGTATATTGTGCGAGAAGGATTTCGTCCTGAAGACGTCGTTGAGCAGGCACATCGTATCGAGCCACGGAGTCGATCCCACGCCCATTCTCGAGAGCGACAAGTGTACGAAAAAGAGCGCGTTGGCTCAGGCGTGGCGAAAAAAATTGATTAAAAGTGAGGAGGTCAGCAGGACCGGTGGACGCAAGCGAGATGCACCGAGCGATTCTTCCGAAGACGCCGACAGCTTCGCCCACGGGAATCTCGTCGAAATCGAAACTGTTTTCGTCTGCGAAATTTGCACCCGCGACTTTAACGATCGCGCTTCTCTCTGGCTACACATACGAGCCACCCACAAAGAATTCGCCGCTTTCGCATGCGGTGTCTGCCTCAAAATCTGCTCCGACAATGCTCAGCTTTTGAATCACGTCAACATGTATCACGGAGGCTCCAAACTTTTGGTCTCCGAGCAAAGGCGATACAGCTGCACCATCTGCGGCAGGCAACACGACTCTCGCAAAAAATTAATCACTCACGTTTCCATTCACAACGTCGACCCCGGATACGATCCTTCCAGCTTTGTTCAACTCAACGCCAACTATTACAACGAAAGCTTCAACAGCAACGAGCCCAACGATCATCTGATGGACTTTGACCCCGAAGACGGCGACAAAGTCGATTGTTACATTTGTTTCAAATCTTTTCCTAACGAGGATCACTTGATTCGCCATCAACGAAACGCTCACAAGTCCGAAGGCCTCGTCCCCGGTAGCCAAGTCGCGATACCCACCAACAACGGGCCCGCTGCTGTTGCCGTCCCCGGCGTCAACGGAACTAAAGCGCAGTATCATTTGTTCTTTGTTTGCGAACTCTGCGGTAGCTCGCATCCGAGCAAATGGGAACGATGGCTTCACGTCAGTGGCAATCACAGCCAAGATCCGTCTATGAGGTGCGAACGAGAGGATTGCGGCAAGATATTCGCGACGAAGGCGTTGCGAAACGAGCACGCGCAGCACCATCTGATTCAGGGATCGTCGCCAAACACTTGCGAAGTTTGTGGCAAGTTGTGGGGAAGTCGAGTGGATTATTGGAAGCACGTGATGGGTGTGCACTCGGACACGGTGCCCCTGATTTGTGGGGTTTGTCTAAAAGTCTTTCCGGACGTGGCGCAGCTGAGTAGCCACGTGAAAACGAATCACTGGCCGTTAACGAACGGAGATTTCAGTTGCGACATTTGTGGTCGGCCATATTCCAACAAATCGAAGATGTCGAGGCATCGGAAGATTCACGGAGTCGTGGAGGTTGACCCGGGAGTAGGAAACAGCGGGGAAACGCCTGGCAAAGCTCCGGCCGATGTTCGAAACGAGACGCGCAGCTTCTGCGAGGAAAAGAGCCCCAAGGAAGTTGAATTGAGTTGCGAATTGTGCGCGGATCTGAGTTTCGATAACTGGCAATCGCTGTGCAATCATCGGCGAATGATTCACGGGCTTTTCCCTTGCGATTTGTGCAACAAATGTTACGGGCGAACGTCTCATCTGTGGAAACACGTGAACCGTGTCCACAAGGGACACGAGGACGTGACATGTCGTTATTGCATGAAAACGAGTGCCTCGAAGGACCACTTGATGGCGCACATTGCAAAAATCCATCGTTACGAGCCGGAGAACAAGTTGGAAATGTTGATGGTCGTGGGGGACGCAGTCGCGACGATTGGGGGCGAGGGGGAGGGCGAGGACGAGGAAGAGGAGCACGAGATGCGACGAAGACGAAGAAGAAGAGGAGACGCGAGCATCGGAGCGATTGGCGAGGACGAAGAAGCCGGAGGAACCGGCGGCGGGGGCGTGCATCACTGCGACAAATGTCAGAAAAGTTTCCACAAACGTTATTTGCTGAGACGCCACATGAAAGGCTGTCAAAATTACCGAAAAGATCCTGGCGCTTTGCTCACCCGTTGTCGAGCTTGCGAAAGGATTTTCAAGGACCGTGCCAGCCTCCAGAAACACATTGAGAATCATCACAGCGAGTACACGTGCCATTTGTGCAACGAAACGGTCACCTCGAAGCTCGGAATCATGACGCACAATCGCGTCAATCATCTTCACCATCCGGACCTCACCTGCGAGAACGGCAACTGCAGAAAGTTGTTCCGCACGAAAGAGGACCTCGAGGCTCATCGGAAAGACCACAAATATCACAACACACCGAACGTGTGCGATTTTTGCGGCGATACCGTCGAAAACAAATTGAAATTGAAAATGCACGTTTTGTCGCTTCACCGAAACGAAATCGGTGTCTCCTGCGGCGTTTGCCTCATTCCCATGAAAGATCCAAAGGATCTCAAGAAACACGTTGAGGACGAACACGAAGGTGTTCTCCACAAACCCAACACTTGCCAAGTTTGCGGCAAACGATACGCCTCCAAGTGGAAAGCTTTCGATCACACGAAAAAATGCCATGGCAAAGTTTTTCGCACGTGCAAACAATGCCTCGCGGTCTTTACCACCGACGCGGACATTCGGCATCATTACGAGCACGTCCACAACGTCCCGAAGGATCAATTGGCCGGCTTTGAGAATCGACTGCTCGAGAATCGAGCCGAAGATTGCGACGCTATCGTCAAGGACGAGCCCGAGGATTACGAGTACGAAGTTCAACGCGAACCAGGCGCCGCTGGTGCTCTTTGCGACGAGAACGAGCCGTACAACTTCAAACGCCGGAAAAGCAGCCTCGCCAACAGCCGCCACACCCACGACTGCGAAATCTGTCCCGAAATTTTTCTCAATCGAGAGACACTCTCCGATCATTACAGAAACGTTCACAATACCGATCCTGAGCGAATGTTCAAAAGGATCAAGCTCGAGAGAGGCGAAGGCGGAAGATTCACAAGCACCGCAGCAGCGACCGGGACGACGACGACTTCCAAGAGGATGTTGATGAGGGAACGCGAAAATTTCGAGTGTCAAAATTGCTCCAGACAGTTTTGTACGAAAAGTCTTTTTTGGAATCACACCAACGTTTGCACGAGGCGAAACTCTGCAAACAGGGAAGATCCGCGATCGTCTTCGTCCTTCGGCGCTCAATCCTCCTCGATTCTCGAGGCTCATCTCAAAAATAACAATCGCATTAAGAAAGAACCGAACGATGTTCCCAGCCTCGACGAGACCAACTTGAACATCCCGGATTTCAATCTCTTCGAGGATATTAACATGCAGCTCTCGGAGCAGCAAAAACCGATTCCCAACCTGATGCCGCTGTCCGAGCTGAGACGAGCGCCCGGCGGTGCCACCAGCGCCGGCGGTTTGCTCCTCTTACCCTCCGCGAACGATAAATCCTTGAGAAAGGACTCGAGAAAGGACTCGCGAAAGGTTTACGACGAGTCGACCAACACCGTTTGCGTCTGCGAGGTTTGCGGCAAACAGTGGCCCGCCAAGAAACATCTCTGGCAACATTTGATTCGCTTTCATCGGAGCGAGGCTGCGGTTACTTGCGGAGTTTGCCTCAAGCTCTGCAACAATTACGAACAGTTGGGACAGCATCTGCGAAACACTCACGAGTCCATTTTGTCGCGGGAGGGTAATAATTTCACGTGCAAAACTTGCGGACGTTATCACAACGCGAGAAGCAAACTTTTGCTCCACATGAGCATACACATTAACAATGACAATGGCGGCGCGGCTTGCTGGTGTCCCAAGTGCGAGAGGAGCTTCGAAAACGAAGAGAAACTCAACGAGCACGCTCGGACTTGTGACAAGAGTCGGCCAATCTTCGAAGAGCACAGCGTCGACGTCGACACCGATCGTGAGACAAAGATCGAGGACGACAAGGGAAGTCTGATCGGCGATGGCGCCTCCCTCACGGGCGAGGACGAGGAGGAAGTCGATTTCTCGGATCGACGAGTACGGAGCCACTCCGAAAACACCGAAAACTCCGAGAGCAGCCGGGGCGATGCTCGCACGAATAGCGACAGCGACAGCAGCGACGAGGAGGAAGGAGAAGATACAGAATCTCGCACCAACAGCCGAGCCACTGGTCCGGCCACTTGTCACTCGGAGAGCGAGGACGATCACGACACCCGAGAGAAAAGTCCCGCGGCCGTTCCTTCCGGCGATGCTCTCAACGACGGCAAAGATATTATTAGCGAAGAAACTAGCAAATTGATAACAAAGAGTCCCAAAGAAGAAGAAGAAGACGAACGTGTGGAGACGAAGGAAAAAGCGAATCGGGCGTCACCGGAAGTTGAGGGAGAAACGAGAACCGAAAAAGTTTCATCGAATGCGACGAAAGATTTGGACAAAAATAATTCATCGACGCTCGTGGAACCGCGTGCTCCGATAAAAGAGGAAAACGAGGACGTCGACGAGGAGGACGAGGACGATGACGGACCGCCCATCCTGAGTCCAATGATGCCGCTGTCGACGGAGAACGCGATCGAAGAACGAGACGACGTCGCGAGCCACCGGCTCAGTCCAATGCTCTCGTTGAACGATACCGAGGAAAAAAATGCTCGCCCAGTGTCCTCGGAAGTTGAGAAAACCGTCAAAGAATCCACGAGAAACGCTCCATCGTCTCCATCACCGGTCGATCAACCGTTCTACGACGACGAGGATTGTGCCGAACGTTCCAACGAAGAATTGGCGTCCGATGAAGAACACGAGGACGAAACCCTCGCCGAAGACAACGAGGAATTGGACGATGAGGACAGTCGCATCCACGTCGTTAATCCCGACGACGAATACCATTCCGACGACGATCGACCACCCGACGAGGACCAGGAGGACGAGGAACAAGAAGAAGAAGAAGAAGAAGAACACGAGGAAGACGACCTGGACGACGATCACGAGGAACCGGAAATCGAGAACCAAGTCGAGGAGGAGGAGGAGGAGGAGGAAGAAGCGGACGAGGAAGAAACGGAGGAAAACTTGGAAATGGACCAGGAAGCTGTCGACGAGACGGAAGAGGAAGGTGTAGAAATAATAGAAGAAGAGAACGAGGTCGACGACGACGAGGAGGAGGAAGAGGAACTAGAGGACGAAGAATTATCCGCCGAGAATTCTTTGCAAATCCACAATTTGGACGGAACCGTCCTGATGGTAGCAAACGACGCCGACGGTAATCAAATTCTCATCCAACGAAACGTCTCGGACATGGAAAACGACGAGTCGATCGGAGCCCTGACCGGTTACATTTACGAGGACGACGACGAGTACGATTTCACCGGATTCCAAGTCGAAGAGGCAGCAATCGACCCTGAGGACCCAAGAAGCAGAGTCGCCGACAGCGAAGACGACCAAGAGGACGAAGGAGAAGAGGAAATAATCCTCGAGCAAGACGACGACGACGAGAGACAAGTCACGGAGGCTGAGGAAACGCGACAAGATTATCCCGCCGACGATTCCTCCAATCACGAGCAAATGGAAATCTCGAACGAGGAAAAAAATGAGCATGACAACGACAAAGTTAAACAGGATCCGACATAG
Protein Sequence
MEPSKERYNELCRLCASYDAVKMDIFGNEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPGTTVTGKQIENGGESYSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEGEHEIEEIHNVSGPDDGVAKVFATSFEDDRKSDEYEMDMETNPSDFLEMTPMVTEELDDSTSKKTQASKTRNLMETFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGAKVVTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRTNLEEHIKSRHTGLPPPPELPVAYVQPDNRYRCKTCPKMYTNVTDLNKHTRVCASDSATKEKQQQQQPLKKIPRKNKSRVDTSDMSSSTSTTDTEDESNNDYRSAEAKLSKNPQLTILKQALTKGGENLKRDYEDRRSQASSGPGNNKPPAAKVARIENSEAPARKRWYCEMCPQNFTSVEKLKQHEMIHDAERPFVCILCEKDFVLKTSLSRHIVSSHGVDPTPILESDKCTKKSALAQAWRKKLIKSEEVSRTGGRKRDAPSDSSEDADSFAHGNLVEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPSSFVQLNANYYNESFNSNEPNDHLMDFDPEDGDKVDCYICFKSFPNEDHLIRHQRNAHKSEGLVPGSQVAIPTNNGPAAVAVPGVNGTKAQYHLFFVCELCGSSHPSKWERWLHVSGNHSQDPSMRCEREDCGKIFATKALRNEHAQHHLIQGSSPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVAQLSSHVKTNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGVVEVDPGVGNSGETPGKAPADVRNETRSFCEEKSPKEVELSCELCADLSFDNWQSLCNHRRMIHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCMKTSASKDHLMAHIAKIHRYEPENKLEMLMVVGDAVATIGGEGEGEDEEEEHEMRRRRRRRGDASIGAIGEDEEAGGTGGGGVHHCDKCQKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSEYTCHLCNETVTSKLGIMTHNRVNHLHHPDLTCENGNCRKLFRTKEDLEAHRKDHKYHNTPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHEGVLHKPNTCQVCGKRYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDADIRHHYEHVHNVPKDQLAGFENRLLENRAEDCDAIVKDEPEDYEYEVQREPGAAGALCDENEPYNFKRRKSSLANSRHTHDCEICPEIFLNRETLSDHYRNVHNTDPERMFKRIKLERGEGGRFTSTAAATGTTTTSKRMLMRERENFECQNCSRQFCTKSLFWNHTNVCTRRNSANREDPRSSSSFGAQSSSILEAHLKNNNRIKKEPNDVPSLDETNLNIPDFNLFEDINMQLSEQQKPIPNLMPLSELRRAPGGATSAGGLLLLPSANDKSLRKDSRKDSRKVYDESTNTVCVCEVCGKQWPAKKHLWQHLIRFHRSEAAVTCGVCLKLCNNYEQLGQHLRNTHESILSREGNNFTCKTCGRYHNARSKLLLHMSIHINNDNGGAACWCPKCERSFENEEKLNEHARTCDKSRPIFEEHSVDVDTDRETKIEDDKGSLIGDGASLTGEDEEEVDFSDRRVRSHSENTENSESSRGDARTNSDSDSSDEEEGEDTESRTNSRATGPATCHSESEDDHDTREKSPAAVPSGDALNDGKDIISEETSKLITKSPKEEEEDERVETKEKANRASPEVEGETRTEKVSSNATKDLDKNNSSTLVEPRAPIKEENEDVDEEDEDDDGPPILSPMMPLSTENAIEERDDVASHRLSPMLSLNDTEEKNARPVSSEVEKTVKESTRNAPSSPSPVDQPFYDDEDCAERSNEELASDEEHEDETLAEDNEELDDEDSRIHVVNPDDEYHSDDDRPPDEDQEDEEQEEEEEEEHEEDDLDDDHEEPEIENQVEEEEEEEEEADEEETEENLEMDQEAVDETEEEGVEIIEEENEVDDDEEEEEELEDEELSAENSLQIHNLDGTVLMVANDADGNQILIQRNVSDMENDESIGALTGYIYEDDDEYDFTGFQVEEAAIDPEDPRSRVADSEDDQEDEGEEEIILEQDDDDERQVTEAEETRQDYPADDSSNHEQMEISNEEKNEHDNDKVKQDPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00439674;
90% Identity
-
80% Identity
-