Basic Information

Insect: Hyposoter didymator
Gene Symbol: -
Assembly: None
Location: scaffold15229:598155-604094[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.54 46 4.6 2.6 1 23 360 382 360 382 0.94

2 19 0.011 0.94 9.9 0.6 2 23 431 452 430 452 0.97

3 19 0.00046 0.039 14.3 2.3 1 23 545 567 545 567 0.96

4 19 0.014 1.2 9.6 1.1 1 23 571 593 571 593 0.96

5 19 0.0014 0.12 12.7 5.5 1 23 686 708 686 708 0.97

6 19 0.0071 0.61 10.5 0.1 3 20 716 733 714 735 0.93

7 19 0.0007 0.06 13.7 0.6 1 20 744 763 744 768 0.93

8 19 2.7e-05 0.0023 18.2 3.9 1 23 861 883 861 883 0.98

9 19 4.6e-05 0.0039 17.4 3.9 1 23 955 977 955 977 0.97

10 19 0.0013 0.11 12.8 1.1 1 20 982 1001 982 1003 0.94

11 19 0.026 2.2 8.8 0.6 2 23 1014 1035 1014 1035 0.97

12 19 1.2e-05 0.001 19.3 0.7 2 23 1074 1095 1073 1095 0.97

13 19 2.4e-05 0.0021 18.3 1.6 1 23 1100 1122 1100 1122 0.95

14 19 0.00011 0.0096 16.2 1.7 1 23 1128 1150 1128 1150 0.98

15 19 4.3e-06 0.00037 20.7 0.4 1 23 1166 1188 1166 1188 0.95

16 19 1.4e-06 0.00012 22.2 0.3 1 23 1194 1216 1194 1216 0.99

17 19 2.4e-05 0.002 18.3 1.1 1 23 1222 1244 1222 1244 0.98

18 19 0.00014 0.012 15.9 4.1 1 23 1250 1272 1250 1272 0.96

19 19 0.0099 0.85 10.1 0.4 1 20 1278 1297 1278 1299 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.54	46	4.6	2.6	1	23	360	382	360	382	0.94
2	19	0.011	0.94	9.9	0.6	2	23	431	452	430	452	0.97
3	19	0.00046	0.039	14.3	2.3	1	23	545	567	545	567	0.96
4	19	0.014	1.2	9.6	1.1	1	23	571	593	571	593	0.96
5	19	0.0014	0.12	12.7	5.5	1	23	686	708	686	708	0.97
6	19	0.0071	0.61	10.5	0.1	3	20	716	733	714	735	0.93
7	19	0.0007	0.06	13.7	0.6	1	20	744	763	744	768	0.93
8	19	2.7e-05	0.0023	18.2	3.9	1	23	861	883	861	883	0.98
9	19	4.6e-05	0.0039	17.4	3.9	1	23	955	977	955	977	0.97
10	19	0.0013	0.11	12.8	1.1	1	20	982	1001	982	1003	0.94
11	19	0.026	2.2	8.8	0.6	2	23	1014	1035	1014	1035	0.97
12	19	1.2e-05	0.001	19.3	0.7	2	23	1074	1095	1073	1095	0.97
13	19	2.4e-05	0.0021	18.3	1.6	1	23	1100	1122	1100	1122	0.95
14	19	0.00011	0.0096	16.2	1.7	1	23	1128	1150	1128	1150	0.98
15	19	4.3e-06	0.00037	20.7	0.4	1	23	1166	1188	1166	1188	0.95
16	19	1.4e-06	0.00012	22.2	0.3	1	23	1194	1216	1194	1216	0.99
17	19	2.4e-05	0.002	18.3	1.1	1	23	1222	1244	1222	1244	0.98
18	19	0.00014	0.012	15.9	4.1	1	23	1250	1272	1250	1272	0.96
19	19	0.0099	0.85	10.1	0.4	1	20	1278	1297	1278	1299	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTGGATATGGAGGCGGCGGAGGATTCGCACGATGACACGATCGAAGAGACAGTGCCCGAAGTTTGTCGGGTCTGTTTGCTCGGACACATGATAATGCGCGATCTTTTCGTCGAAAACAATGTCAGTTCGCTCTCCGCCAAGGCTATGAGCTTTGCTAGCGTTAAGATGGTACCCGACGACGGTTTGCCAGCCCAAGTTTGCTGCGATTGCGCAGACAAATTGGAAGCGGCCTACGAATTCAAACTGCAGGTGGAACAAGCGGACAATGTATTGCGACAAAGATACGACGGACTCAACATCAAGGAAGAACTTTTTTTCAACGAAGTGGAAGTTCATCTGGAAGCGGAGAGAGGCGACGACGTGCACAGTCTCAACGTCGATGCTCATTATCAAGCGACGGTCGATAGTCTGAACAGCGTCGATGCGGATGGCCAGAAGTCTGGGCTGCTCAAAGATCATTTGGCACTTTTGGAAGTGGAAAAGCTTGCCAAAGAACAAAGCGCATTGGAAGAGCACAAACATCAACAAGTTCTGGATGAAGAAACTGGCGTTTCTGCGATGCTGGAAGCGAACGAAAGCCACGCACATTATTTGGGCGAGAGCGAAGGCACGGTCGTCGAATTGGACGATTGCAACGACGTGGATTACCGCGAGACCGTTAAAGCTCAGGAAATCCAGGATGCTGATGGGATCACCGCCGAAGAGCACAATTACATAATGCAACAAGGTTATACGTTGACGCGCAACGAGGGTGAAGAGTTGGTGTCACAGGAAAGCGTCGATTCGGTGAATAACGAATCGGTCAATTATTTGGCAATGATGGAGGACGAAATGAGAATGAAAGAGGATCATCAGCATCGAGACGAAACTATTGATACGGTCGAGTCGGAACAACAAGAACAAGAGGATATTGAAAAAATGGAAACCTCACCGAACGAGACACGTCGCAGTAAGCGCAAGTTGACGAAACGCCGTCGCACGAGCGACGAGGACAATTATTTCGAGAATTTGAATCTGAGCAGCAGGTTGAAGCGAACACAGTCTCAGGAAAAGAGTGAAAAATTATATTTCCTCTGTTATTTGTGCGACAAAAGATTTCTGTCTAAGGAAATTCTCAAGGAACACATGCACTCTCACGAGGAAGTGAGACGCGCGTTATCCTTGAAAAAACAGGAAAAATGTGAAAAAACCCTCAACAGCCCGACGAAAAGTCCTGTAGCGTCGACGAGCACGACTCCCCCGATCCCCAGCAACAATTTGTCATCGGGAAAGAAAGCCAACAAGTGTCCCTACTGCGGCAAAGAATATCTTTACGTCATATCGTTCAACAAACACCTCCGTCAGCACGAGAAAAGCAAAGGATTCGATTCCAAAGATTCGTCCTTTTCACAGGAAGACTCTGGACGTGACGAGGCCAAAGATTCTTCCCATTATTACGATTCTCTCGATTACGACGAGTCGAGAAAATCCACAGATATGAACAATCGCATAAACAGCAATGAGAACGACAGCGCTGCCGATGAGAATATCGAGGACGAGCAACACTTCAGAATGGAGGTTGAGGTTGAAAGTTCATCCTCCAAAAAACACGGACGAAGATCAATGCGCAACGAAATATCTTCTTACTCGTGCGATAAATGCCATCAAAGCTTCGCCAACAAACGCTCACTTTTGGAACACTCGAGCATACACTTTTCCATTTTTAAATGTAGCACTTGCGAGCTTGAGTTCGACGAATTGGAAAAACTTCGAAAACACAGAACCGAGCACGTCGTCGAGGGTGTACTGTCGCAGCAAGACCTCGAGGACAACGTTTACGAGAGCGAATTCGACGCGAAAATGCATGGAAACGATGCCAATGAAATTTACAAGAACGAGGATTTCGAAGAAAATCAACTGGAGAATTGCGAGCAACAGGAAGACGAGGACGACGATCAGGATCATAACATTGACACTGAGAATTCCTGGCATTTGGAAGTTGAGGGCGAGGACGAGGATCACGACGAAATGAGGGATATTTCTGGAAACTGGACGGAAAGTAAAAATTACAAATGTCCACATTGTACGATTACGTGTTCGAGTAAAAAATCGTTTATTCGACACGTTGAATATCACGAAGAGGCCAACCAACAAATTTGCACGTTGTGCAAAGCCGAATTCGCCAGCAAGGAAGAATTGCAACGGCACGTCGAGCAGGAATACGCTTGCAAAACAAAAATATACAAATGCACCGATTGCAGCAAAGTTTTTGGTAATGAATTGACCTTGAGAAATCACTTGTTCGCGACAGATCACAAAACGATTATGCATGGAGAACCTTACGATCCGAACAAAAGAATAAAGAGAGTAGCTGCCAAGGCAGCACAGAAAATAATCGACAAAATAAAGACAGAGGACGATTTGGAGGATTCTGAGGATGAAGAAAAATTGAACAATTCGGAAGACCAAGAAGAACACTTGGATTCGAGTGATGCGAAAATCAGTAATCTCCGATGGGATCGTCAAGATATAAAAACGGAGGATACGTCACCGAGAAAAATGCAAGTTCAACGTAATCGTCGGAGACACAATTACGAGTGCGAAACGTGTGGACGTAAATGTCGATCGAAGCAATCGCTGACGAAGCACATGCTGCAACATCGTTCCAAAGAGGAAAGGACCGACGTAACGGACAGCTCGGATAATTCGCGTAGAAATAATTCGGCCCAAACGACCGAGAGATCGGGATCGTTGAGCAATCAGCAACAAATAACCAGAACGATGATTTTCAAGGGAGAGGAAAGGACCGAGGACGAAGAAGAGAACGACGACAATTCTGATTTCGAGAGCGGGCTCGATTGGCCTGTTGACAGTCACGAATGCCCGACGTGCAAGAAAAAATACAGCACGAAAAAGTCGCTGCTGCGTCATCAATTGTTGCACCAAAAGCCTAATTTCGAGTGTGACATTTGTAGCGTGAAATTTTATCGCAAGGACAAACTCAAATCTCATTATGACAAATGCTCCGAGAAGAATCCTGATCAAGTAAGAAAATGCAACATTTGCGGTGACACCTTTGAGAACAACGATATATTGAAAGAGCACAGAAGTCGTCACGTCGATGAAGGCTTATTGACGGAAGAGGATCTTCGAGAGATTGAGCCAGGAATGGACGAGCGAAAAGAATCGACCAAAGTAGCTCGAAAGAGACGAACCGATATCGTGGGCTTGGAATGTACGGAATGCAACAAACGATACACATCGAGGAAAGGCCTCTTGCGACATATCCAAGTACACGAGGGAAAAAAGTACCTCTGTGACATTTGTCCGAAGAAATTTTATCGTCGTGAACATCTCAAGATTCATGTGGCCAAGCATAACATGATAAAACCGTACAAATGTCCACGTTGCACCAAACGCTTCATCAAGGAGGAACAATTGTCGAGTCACTTGTCTAAGCACGATCGTACTTTCAAGAAACCTAAGGAAACCGACACGTCCAAGAGATTTTTGTGTGAAATATGCTCCAAGAGTTTCACCCAATCGACCACACTCATCGCACATCTGAGAGCACACAACGGCATCAAACCTTATGTTTGCGAAGTTTGCGCCCGCCCCTTCACGACTAACGCTTATTTGAAAATGCACATGAGGACTCACACCCAAGAGAGACCGTACACTTGTCAACATTGCTCGAGAGCTTTCGCTCGCGCCGATACTCTGGCGAATCATTTGACATCCCACACCGGCGAAGCTAAATATCATTGCAAATATTGTCCGAAAAATTTCCGACGTCTCAAATCTCTCAAAGAACACGTATTCATTCACACCGGTCAACGACCCTACGCCTGCCCAACGTGCGATCGTCGTTTCAACAACAACGGCAGTCGCTACGCTCACAGCAAACGATGCAAACAAAATCACTTGCAAAATTCCAATCGACCGACCACCAACAACCCTCTCGACAATCCAATCTTACAAGAAAATCTCGTTCACAACCAGCTCGTACAGCCCATCAGACTTCACCAGTTGACAACTACTCATGAATTAATTCCTGCACACGAGGAACAGACACAAATACAATTGGTCAAATCCCAGAGCATCAAGGCCATCACCATCGCCAGAACCACCGACGATCTAAACGGATCGCAAATGATACAGCATCAGGAAATTCTCATGCCACTGATCCTCCCTTTGACTGTCACACTCACAGATCCTGACGAAGAAGTGATTTTGCCCGAAGGCACGAAAATTTATACCACAGCTTAG
Protein Sequence: MDAVDMEAAEDSHDDTIEETVPEVCRVCLLGHMIMRDLFVENNVSSLSAKAMSFASVKMVPDDGLPAQVCCDCADKLEAAYEFKLQVEQADNVLRQRYDGLNIKEELFFNEVEVHLEAERGDDVHSLNVDAHYQATVDSLNSVDADGQKSGLLKDHLALLEVEKLAKEQSALEEHKHQQVLDEETGVSAMLEANESHAHYLGESEGTVVELDDCNDVDYRETVKAQEIQDADGITAEEHNYIMQQGYTLTRNEGEELVSQESVDSVNNESVNYLAMMEDEMRMKEDHQHRDETIDTVESEQQEQEDIEKMETSPNETRRSKRKLTKRRRTSDEDNYFENLNLSSRLKRTQSQEKSEKLYFLCYLCDKRFLSKEILKEHMHSHEEVRRALSLKKQEKCEKTLNSPTKSPVASTSTTPPIPSNNLSSGKKANKCPYCGKEYLYVISFNKHLRQHEKSKGFDSKDSSFSQEDSGRDEAKDSSHYYDSLDYDESRKSTDMNNRINSNENDSAADENIEDEQHFRMEVEVESSSSKKHGRRSMRNEISSYSCDKCHQSFANKRSLLEHSSIHFSIFKCSTCELEFDELEKLRKHRTEHVVEGVLSQQDLEDNVYESEFDAKMHGNDANEIYKNEDFEENQLENCEQQEDEDDDQDHNIDTENSWHLEVEGEDEDHDEMRDISGNWTESKNYKCPHCTITCSSKKSFIRHVEYHEEANQQICTLCKAEFASKEELQRHVEQEYACKTKIYKCTDCSKVFGNELTLRNHLFATDHKTIMHGEPYDPNKRIKRVAAKAAQKIIDKIKTEDDLEDSEDEEKLNNSEDQEEHLDSSDAKISNLRWDRQDIKTEDTSPRKMQVQRNRRRHNYECETCGRKCRSKQSLTKHMLQHRSKEERTDVTDSSDNSRRNNSAQTTERSGSLSNQQQITRTMIFKGEERTEDEEENDDNSDFESGLDWPVDSHECPTCKKKYSTKKSLLRHQLLHQKPNFECDICSVKFYRKDKLKSHYDKCSEKNPDQVRKCNICGDTFENNDILKEHRSRHVDEGLLTEEDLREIEPGMDERKESTKVARKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCPRCTKRFIKEEQLSSHLSKHDRTFKKPKETDTSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYTCQHCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNHLQNSNRPTTNNPLDNPILQENLVHNQLVQPIRLHQLTTTHELIPAHEEQTQIQLVKSQSIKAITIARTTDDLNGSQMIQHQEILMPLILPLTVTLTDPDEEVILPEGTKIYTTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00262827;
90% Identity: iTF_00439664;
80% Identity: -