Hdid003269.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hyposoter didymator
Gene Symbol
ECU06_1150
Assembly
None
Location
scaffold25:2130811-2135168[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.0004 0.034 14.5 0.5 2 20 54 72 53 74 0.94
2 24 0.011 0.95 9.9 5.7 1 23 102 125 102 125 0.96
3 24 0.0016 0.13 12.6 1.6 1 23 159 181 159 181 0.98
4 24 1.3e-05 0.0011 19.2 1.6 1 23 187 210 187 210 0.97
5 24 1.1e-05 0.00096 19.4 1.1 1 23 216 238 216 238 0.98
6 24 3.1e-07 2.7e-05 24.3 0.6 1 23 244 266 244 266 0.98
7 24 0.0001 0.0087 16.3 1.0 1 23 272 294 272 294 0.98
8 24 7.4e-05 0.0063 16.8 4.1 1 23 300 322 300 322 0.97
9 24 1.1e-05 0.00098 19.3 1.0 2 23 329 351 328 351 0.96
10 24 0.00057 0.049 14.0 1.8 1 23 414 436 414 436 0.99
11 24 0.0018 0.16 12.4 0.1 1 23 442 465 442 465 0.95
12 24 0.081 6.9 7.2 0.4 1 23 471 493 471 493 0.97
13 24 2.9e-06 0.00025 21.2 2.8 1 23 499 521 499 521 0.96
14 24 0.0017 0.15 12.5 4.0 1 23 686 709 686 709 0.95
15 24 0.00013 0.011 16.0 1.8 1 23 715 737 715 737 0.97
16 24 0.00034 0.029 14.7 0.6 1 21 743 763 743 764 0.94
17 24 4.9 4.2e+02 1.6 1.8 1 10 771 780 771 786 0.85
18 24 0.00033 0.028 14.8 0.9 1 23 878 900 878 900 0.98
19 24 0.00052 0.045 14.1 7.2 1 23 906 929 906 929 0.96
20 24 2.1e-05 0.0018 18.5 1.1 1 23 935 958 935 958 0.97
21 24 1.5e-06 0.00012 22.2 3.0 1 23 964 986 964 986 0.98
22 24 0.0042 0.36 11.3 2.3 1 23 992 1014 992 1014 0.94
23 24 0.00085 0.073 13.4 6.0 1 23 1020 1042 1020 1042 0.96
24 24 4.2e-05 0.0036 17.6 1.7 1 23 1048 1071 1048 1071 0.98

Sequence Information

Coding Sequence
ATGAGAGATACGAGTTCAGAGAAATTGTTTAAAAGAGCAACTGGGAAGATTGTAGTAGCTCGAGTGACATTGCCACAAGGTGACGACGACGAGTTTGCGATCGCGAACGAACCGTCGGCCGGAGGGAAGGATGCTCCAAAGTTGGAGAATTTGATGGTCTCGTGTGAGACATGCACGAGGATATTCAAGAAAGAATCGAATCTAAAGAAGCATCGAGTGAGTTGTCGAGTTGAAAAAGAACCGAAAATTGAGTGGACAGAAAAATTTGAGGAGCGTATAGCAGAAAAATTGAATGCTAAAATCCATTGTTGTAATTACTGCGAATATACGACGAAAAAAAAAAACTTGTTGAATGTGCACGTACGACGGGAACACGAAGAAAGCATAAGGACTATTAAAAAGAGGAAGAAAGATCGAAACGTGGATGAGGAAATGGTGGTTAAGGCGAGAATGGAAGCAAACGGTCGTGTCTATTATCATTGCAACGATTGTGGCAAAAACCTATTGTCTCGTTACACTTTCGCATGGCATATGAGAATTCACACGGGTGAGAGACCATTTACTTGTCACTTGTGCGGCAAACAATTTCGCGTTAATCAAGGCTTGGCTCGACATTTGCGGGAAACTCACGCAGGCATTAAAAAATTTTCGTGCGATATTTGTTCCCGGATGTTCTCGACGAAACGCAACGTCGAGGATCATCGTCGTATACACACCGGCGAGCGTCCTTTCGTTTGCAACGTTTGCGGCAAAGCTTTCAAGCAAAAAGCCTCGCTCTTCGTTCACAATCGTACACACACAGATTCCTTTCCGTTCAAATGTAATTATTGCAATCGAGGCTTCCGTACGAGGCCACCACTCATTTTGCATCTGACCAAACACACCGGTGAAAAGCCTCACACTTGCGACATCTGTCATCGTGCTTTTCGCATCAAATACGAGCTCAAACGTCATCGTCTCATACATTCCGAAGAAAAACCTTGGCGGTGTACCGACTGCGGTATGGGCTTCCGTCAGAAACGCTATCTCGTTAATCACAGGAGAAGCAATCATGAGTGTAGAAAAAACACCAAGAATCAATGCTTCGAGAGTCAAGAGGAAGAAATTAAGATGGACGGAGATGAAAATCACCGAGTGAAACTAAATGTCGCGGAAAAGAGACGAAAGCTTGGCGTTGAGACTGAGAAACGCGAGGAATTGTTACGTCGTTCAAAGATCCGCGATGGAAAAAAGACTCGATACAAATGCGAACGATGCACGAAAATATTATCAACGACTTACAATTTTCTGGCTCACTTGAAAAGCCACAGCGATGAGAAGCCATACGCGTGTCCCGTTTGTCAGAAAAACTTTGGCTTCGCGTCAATTCTCAATCGACACATAAACGCTGTACATCGCGAGGAAAAAAAATTCGCCTGTGATCTTTGCGATCGTCGGCTAGCGACTCGAATCTCACGGGACGAACATCGCCGGACTCACACCAACGAGAGGCCACACGTTTGTGAAACTTGCGGCAAAAGTTTTAAGCAAAAAGCTTCTCTTAACGTTCACAAACGTTTTCACACTCGTGATTTCAAGCACAAGTGCCAGGAAGAACATTCCGAAAAAAGGGATACGCTGATAATGAGCATCGATGAGAGCGACATCCTCGTTTACGATGATCAAGTGAAAAGTGTCTGTTGCGGAATATCCAGTAACAGTTATCCTGTAATAACTGAGTTCGTCGATCACACGAGAAACATAGACGATCCTGAGGCGTACGAAGAGGGAGAGAGCAACAACGAGCAATCCGAGAACGTGGTGTATTTATCCACCGAAACTGGTGAGATTACGTTCCAAGCGGATGCTCGAGAGATTTGCGATCCAAATAAGCCGCTGGAGTCGCAAAACAATTGCGACTTTGTCGGAATGCATGAAAATATTTCGACGTCGCGAGGAAATGATGAAAATCAACAGACCAAGCCAAATCGTTGCATGGGCTCGAGTGTCGCAGTTGCGGATGTTAATTCAGTTCCCTCCAAAATGTTGACGAAATGCGAACAATCAAAAACTACATACATGTGCGAATTTTGTGGTAAAACTTATCACTCGTTGTTGCATCTTCGTACTCACCAAAAAGACGCACACGCCAGTTTGAAGTTACACATGTGCGATTTGTGCGAACGTAGCTTCGCGTTGAAGTCGACATTGGAGAACCATCGACGCTTGCACGCGCGAGAAACTCCTTACAAATGCGCCTATTGTGATAAAAAATTCCGCACCGCAAACGCGATGTACATTCACGAGCGTAAACGCAACAATTGCAAACCTTACGTTTGCACCAAGTGCGAAAAGAGATATTTGACGAAAGAGTGTTTGCCGGAGGAAGTGAAGGCAGGACCTGAAGAAATTTTGATAATTTCTGCGAACGAGAAACGAGCGAGGGGAAAGTCTGTAGGAATATTCGTAAAGAATGTGAGCAAAGAGATAACTGTTACGAAAAGGAATCGAAACAACGAGAGAAGAAAGAGAATATCTGAAGATTCGGAAGTGATGGTTATCTCGGAGACCGAGACCTCCAAAGAGAGGAGAAAAATGAAGGAAGAAATGGAAGAAAAGTTTGTAAAGAAAAAAGCGATTTCGAGGGATCCCTATGTTTGCGATTTATGCGGAAAAAAATTTCTTCTTCGTAGCAGTTTAAAGTCCCATTTAAAACTACACACAGGATTGAAATATTTCACGTGTCACATATGTGGCAAGCAATTCACTCAAAACGGTTGTCTATATTATCATCTGAAACATGTTCACGGTGGCGTGAAAAATCATTCGTGCGACATTTGTGGGAGATCATTCGCGATGAAATCGACGATGGAAGATCATCGTCGTTCTATTCATACCGGAGAACGTCCCTACGTTTGTCATTCTTGTGGCAAAACATTCACAACAAAATCCTCATTGTACATACACAGTAGAATTCACACTCAGAATTATCCCCACGAGTGTAAATATTGCAAAAAGTCTTTCAGATGGAAACAACAATTGATCGGACACGTGACAATTCATACGGGTGAAAAAAAACATTGTTGCGATGTTTGCGGCAAAGCATTCGGCGTTAAAAATCAACTTACCAGACACAAACATACTCACGATACTGCTAAACCGTACACCTGCGAAAAATGTGGCATGAGCTTTGGGCAAAAACGCTATTTATCGAGCCACGAGAGATCCAAACATCGATGA
Protein Sequence
MRDTSSEKLFKRATGKIVVARVTLPQGDDDEFAIANEPSAGGKDAPKLENLMVSCETCTRIFKKESNLKKHRVSCRVEKEPKIEWTEKFEERIAEKLNAKIHCCNYCEYTTKKKNLLNVHVRREHEESIRTIKKRKKDRNVDEEMVVKARMEANGRVYYHCNDCGKNLLSRYTFAWHMRIHTGERPFTCHLCGKQFRVNQGLARHLRETHAGIKKFSCDICSRMFSTKRNVEDHRRIHTGERPFVCNVCGKAFKQKASLFVHNRTHTDSFPFKCNYCNRGFRTRPPLILHLTKHTGEKPHTCDICHRAFRIKYELKRHRLIHSEEKPWRCTDCGMGFRQKRYLVNHRRSNHECRKNTKNQCFESQEEEIKMDGDENHRVKLNVAEKRRKLGVETEKREELLRRSKIRDGKKTRYKCERCTKILSTTYNFLAHLKSHSDEKPYACPVCQKNFGFASILNRHINAVHREEKKFACDLCDRRLATRISRDEHRRTHTNERPHVCETCGKSFKQKASLNVHKRFHTRDFKHKCQEEHSEKRDTLIMSIDESDILVYDDQVKSVCCGISSNSYPVITEFVDHTRNIDDPEAYEEGESNNEQSENVVYLSTETGEITFQADAREICDPNKPLESQNNCDFVGMHENISTSRGNDENQQTKPNRCMGSSVAVADVNSVPSKMLTKCEQSKTTYMCEFCGKTYHSLLHLRTHQKDAHASLKLHMCDLCERSFALKSTLENHRRLHARETPYKCAYCDKKFRTANAMYIHERKRNNCKPYVCTKCEKRYLTKECLPEEVKAGPEEILIISANEKRARGKSVGIFVKNVSKEITVTKRNRNNERRKRISEDSEVMVISETETSKERRKMKEEMEEKFVKKKAISRDPYVCDLCGKKFLLRSSLKSHLKLHTGLKYFTCHICGKQFTQNGCLYYHLKHVHGGVKNHSCDICGRSFAMKSTMEDHRRSIHTGERPYVCHSCGKTFTTKSSLYIHSRIHTQNYPHECKYCKKSFRWKQQLIGHVTIHTGEKKHCCDVCGKAFGVKNQLTRHKHTHDTAKPYTCEKCGMSFGQKRYLSSHERSKHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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