Basic Information

Insect: Hyposoter didymator
Gene Symbol: -
Assembly: None
Location: scaffold25:2478408-2484625[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0022 0.19 12.1 1.4 2 23 37 58 37 58 0.97

2 26 3.3e-05 0.0028 17.9 2.4 1 23 235 257 235 257 0.96

3 26 0.0067 0.57 10.6 0.5 1 23 262 285 262 285 0.97

4 26 3e-05 0.0026 18.0 1.4 1 23 293 315 293 315 0.98

5 26 3.6 3.1e+02 2.0 3.7 1 23 321 344 321 344 0.93

6 26 7.4e-05 0.0063 16.8 0.9 3 23 356 376 354 376 0.97

7 26 1.6e-05 0.0014 18.9 1.5 1 23 382 404 382 404 0.96

8 26 6.9e-08 5.9e-06 26.3 0.3 1 23 410 432 410 432 0.99

9 26 1.7e-07 1.5e-05 25.1 0.6 1 23 438 460 438 460 0.98

10 26 2.7e-06 0.00023 21.3 3.1 1 23 666 688 666 688 0.99

11 26 2.2e-05 0.0019 18.4 0.4 1 23 698 720 698 720 0.95

12 26 1.7e-06 0.00014 21.9 1.3 1 23 726 748 726 748 0.97

13 26 0.015 1.3 9.5 1.6 1 23 753 776 753 776 0.97

14 26 0.028 2.4 8.7 5.4 1 20 782 801 782 804 0.95

15 26 0.0046 0.4 11.1 0.6 1 23 810 833 810 833 0.96

16 26 2.4e-05 0.0021 18.3 1.6 2 23 844 865 843 865 0.94

17 26 2.1e-05 0.0018 18.5 1.1 1 23 869 891 869 891 0.95

18 26 2.4e-05 0.0021 18.3 1.7 1 23 897 919 897 919 0.98

19 26 1.1e-06 9.8e-05 22.5 1.5 1 23 925 947 925 947 0.99

20 26 0.0025 0.21 12.0 3.8 1 23 1149 1171 1149 1171 0.97

21 26 0.00093 0.08 13.3 1.0 1 23 1181 1203 1181 1203 0.98

22 26 0.095 8.1 7.0 1.0 1 23 1213 1235 1213 1235 0.96

23 26 0.012 1.1 9.8 0.4 1 23 1277 1299 1277 1299 0.97

24 26 0.57 49 4.5 2.7 1 23 1309 1331 1309 1331 0.90

25 26 4.2e-05 0.0036 17.5 3.8 1 23 1337 1359 1337 1359 0.97

26 26 0.032 2.7 8.5 0.5 1 23 1364 1387 1364 1387 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0022	0.19	12.1	1.4	2	23	37	58	37	58	0.97
2	26	3.3e-05	0.0028	17.9	2.4	1	23	235	257	235	257	0.96
3	26	0.0067	0.57	10.6	0.5	1	23	262	285	262	285	0.97
4	26	3e-05	0.0026	18.0	1.4	1	23	293	315	293	315	0.98
5	26	3.6	3.1e+02	2.0	3.7	1	23	321	344	321	344	0.93
6	26	7.4e-05	0.0063	16.8	0.9	3	23	356	376	354	376	0.97
7	26	1.6e-05	0.0014	18.9	1.5	1	23	382	404	382	404	0.96
8	26	6.9e-08	5.9e-06	26.3	0.3	1	23	410	432	410	432	0.99
9	26	1.7e-07	1.5e-05	25.1	0.6	1	23	438	460	438	460	0.98
10	26	2.7e-06	0.00023	21.3	3.1	1	23	666	688	666	688	0.99
11	26	2.2e-05	0.0019	18.4	0.4	1	23	698	720	698	720	0.95
12	26	1.7e-06	0.00014	21.9	1.3	1	23	726	748	726	748	0.97
13	26	0.015	1.3	9.5	1.6	1	23	753	776	753	776	0.97
14	26	0.028	2.4	8.7	5.4	1	20	782	801	782	804	0.95
15	26	0.0046	0.4	11.1	0.6	1	23	810	833	810	833	0.96
16	26	2.4e-05	0.0021	18.3	1.6	2	23	844	865	843	865	0.94
17	26	2.1e-05	0.0018	18.5	1.1	1	23	869	891	869	891	0.95
18	26	2.4e-05	0.0021	18.3	1.7	1	23	897	919	897	919	0.98
19	26	1.1e-06	9.8e-05	22.5	1.5	1	23	925	947	925	947	0.99
20	26	0.0025	0.21	12.0	3.8	1	23	1149	1171	1149	1171	0.97
21	26	0.00093	0.08	13.3	1.0	1	23	1181	1203	1181	1203	0.98
22	26	0.095	8.1	7.0	1.0	1	23	1213	1235	1213	1235	0.96
23	26	0.012	1.1	9.8	0.4	1	23	1277	1299	1277	1299	0.97
24	26	0.57	49	4.5	2.7	1	23	1309	1331	1309	1331	0.90
25	26	4.2e-05	0.0036	17.5	3.8	1	23	1337	1359	1337	1359	0.97
26	26	0.032	2.7	8.5	0.5	1	23	1364	1387	1364	1387	0.97

Sequence Information

Coding Sequence: ATGGAGACGGGGGACCGTCCTCGCAGTTGCAACGTTTGCATGAAATCATTTTTACCTTCGAACGCTCTGGTTGTCCACAAACTCACTCGCATCGGCGTTAGACCTCGTGTCTGTGACTTGTGCGACAAGAGCTTCACTGAACGTAACACGACGATGGCCCACAAACGAAAACATCCCGGTAGTCGTCCCCCTCCGGCGCCCGGGTCATTGAGCAAATACGATAACGCGTTAGACTCGAATTCGTTCATCTCGCCAGATCCGCTAGGGCCAGACTATCTGACGGTAAAGATAATGGACGATATCTATCGAATCCCAAAATCCAAGTGCTACATGGTGTTGAATCATCCAGCGAGTGGGAACAAGGCAATTTTGGATTCGACGCCATTTATGGAGTTGGAGAATTTGTCAAACGTGGGGATTAACTTGGATAAAGAAGTAGCTACGGGGTCAAGGTCATCGGTGAGTATGAACAAGATACCGATGGTGAAAATTGGTTGTCCGTTTGAGATGGAAACGGCGCCGAAGCCTGTGAAAAAAAGAGGCAAACGAGGGAGAAAACCGGCGGCGGCGGCGGCTCCGGCGAGAGAGAGCAAAAAGACTCGAGCGAAAGAGCAGGAGGAGGGAGGGAGGGAAACCGCAGGGAAAAGTGCGTTCGAGTGCACGTGGGTAAAGAGCGAACCGGAGGAAGTGAAGGAAAAAGAATATTTGTGCACGACTTGCCCGAAAAAGTTCCGCAGCAATCGCGAGCTAAAGTCCCACGAGAAAACTCACTTGGAGCCGCGTTTTTATTGCAACGAATGCGATTACGACACGAGCGCGTTGTCGACCCTGAGTATTCACATGACGAGGAACCACCCGGACGAGGCCGATGCCCCGTTCCAATGCACGCAGTGCCAAAAAAGATTTCGCAAAGCGATCGATCTCCAGGAACATTACAACATTCATTTGGGCGAAAAACCTTTCGCCTGTCAACGTTGCGGCAGTGCGTTCCATTTGCGACGTCAGCTCTCGGCACATTGCCGCAAAGTTCACCCTCGAAAGAAAGTCCGCGTTACCAGCACCGCCTGCAACATTTGCGGTCGCGTTCTTTCCTCCCGGAGGTCCCTCTCTCGCCACAAACAAACTCACAACCCCACGAAACTCTATCTCTGCGATTTGTGCGGCAAGAATCTCAGCAACGCCGAGCATCTCAAGAAACACAGACGCATTCATACCGGCGAAAAACCATACGTTTGCGACACTTGTGGCAAAGGCTTCACCGACTCGGAAAACTTGCGACTCCATCAGCGCGTTCACACCGGCGAAAAACCCTACCAGTGCGATCAATGCCCCAAAGCTTTCTCGCAACGCTCTACACTCACCATTCATCAACGTGGACACACCGGGGAAAGGCCGTACATCACGCCAGATCCGCTAGGGCCAGATTATCTGACGGTTAAGATAATGGATGATTTCTATCGAATCCCAAAATCCAAGTGCTACATGATGTTGACACGTCCCAAGGTCGGGGACAAGTCGTCGTCAACATTGGATAAAAGTTTGACGAAGGATGCTGAGCCTTTGGAAAGCAGCGTCGAGGCGAGTATCGACGGAGAAAAAGTTTCGTTGGTGCGTTTGAAGTCTCGCGAGCCTCGAGCCTCGAAGTTGGAGTGTTGCTCGGACTTGGAGGCGGCGCCGGAGCCGAGGAGGAAGCGAACAAAGCGAAAAATCAGTGAGAAACGTGACCGAGGGAAGAAAAAGTTGCGGGCGATCGAAAAAGCCAGAAAAGAGGATGAAACCGAGTGCGAGAAATCTTCGGAGAGACTCGACTCCGAGGATTTGGACAACGTGCCCCTGGACGACCGGGAAATCCGTGAAAAACCCAAGGAAAACATCGAGAACGAGGAAACCGAAGGGAACGACGTTTTGGAAAGCTTGTCCATGGATTCCAGCCGAGAACTGGAGGATTCGAACGAAGAGACGAAACAAATGCCCAAGAAATCTGCGTGCATGCCTTACCAGTGCCAAACCTGCGGCTACAAATTTTCTCGCAAATGGAAATACGAACGTCACATGAATTCTCATGCAAGAAAAAAAGTTGAATCCCCAAATTTTGAGTGTGTTCCTTGCGGCAAAAACTTCACTAGACCCTCCGCCTACAAGCAACACATGCTCAAGCACAGCAACGAGAAACCTCACAAGTGTGACGTCTGTGACAAAGCTTTCAAGAGACCTTACGAGCTCAAAATGCACCGCGAGATCCACAGCGGCTCGATGCACACCTGCGACATCTGCAGCTTCAGTACCGCGTACAAAGTCTCCCTGATGGTCCACAAGAAACGTGTTCACCAAAAAATCTATCGGCACAAATGCGAGCAGTGCGAAAAGGCTTTCATGTCGAAACACGAGCTCGAGGACCATCGGACTTGCCACCTCGGCGAGAAGAGTTTCATCTGCGAAATCTGCGGAAACGGTTTTCTCCAGCGAAGCTATTTGGTTCATCACAAACGCGTCGTTCACGGGGTCCACAATCGAGCGCCGATGGAGCTCAAGTGCGAAATGTGCGACAAAACCTTCGCGACCAAATATTGCCTCCAAAATCACGTCGGAATCCACTCACAAAAGTTTCTCTGCTCCCAGTGTGGCAAAGAGTTTGCCACCAATTATTCCCTCCGAATGCACAATCGTATGCACACTGGCGAACGTCCGCACAAATGCAACATGTGCTCCAAGTCCTTTGCCCGCTCGAACGCTCTCGCTGTCCACAAACTCACTCACACCGGCCAGAGACCTTACGTTTGTGATATTTGCGACAAAACCTTTACGCAGCGCACCACGATGATGGCTCATCGGAGAAAACACCCGGGCAGTCATCCACCTCCCCCTCGGACTTCGCTGGTCGAGCTGGCCAACGTCGGAGACTCCAATTCGTCTGCCGTCCCAGATCCTCTGGAGTCGGAGTTTCTCATTGTTAAGATTTTGGAGGAATTCTACCGAGTGCCAAGGTCTCAGTGCACGAAGCTCTTGACCCTCACGTCGGCCGTGACCTCGGCCAAGCCGGATGGAGCGTCAGGGAGGAAGAGGAGGAAGAAATTTGCGAAGAAAAAAAAGGAGAAAATTGCGGAGGAAGAAGAAGGAACGTCGGCTCAGGCGCTCGAGTTTGTCGCTGTCAAGACGGAATTTCCGTCGGACAGCGAGGCCCCGAAGGCGGAAGAGGCGGAGAAAGAACCTGAGTCTTCATCGATGAGCATGGATCACGAGATCAAGAGCGAGAGCGACGCAGCTCCTACGATCAAGCACGAATCCATCGACCTCGACGAGATGCCTCTCCACGAGCGTGAACTGCTCGTCCAAGTGGAAAAACGACGAGAGGATCTTTTGAGAGGCCAGGAAGAAAGCGACGGTTTCTCAATCGTGGGATTTCGCAAATCTGCCGATTTTAAAAGGTCGAAAAGCGACGCGATCTTCGTGTGCAAACCTTGCGGCTACTTGTTCAAGCACAAATCGAAATACGAGAGACACATGTACATGCACAACGGGCAGAGACCTCGCCAGAAAAGTTACAAGTGCGAGCCTTGCGGCTTCAAGTTTTCTTCCAAGCCAAAATACGATCGTCACATGAATATCCACAACCGAGAGGACGACGGGACTGTTAATTACGAATGCAGACCCTGCGGCTTCCAGACGGCTTACAAATCGAAATATGATCGACACATGAAAATCCACAGCAAAAACAAGAGCGAGGAATCGCCTTATCATTGCTGTCCTTGCGGCTATGATTTTCCTTGCCAATCTGAGTTCGACAGACACATGAGTCTCCACGTTGGCAAACACTCCGAATCGATGAATTACGATTGTGAGATTTGCGACGAAAAATTCGACATTAAATGGCGATACGATCGACACGTCAAAACTCACACGAGAGTCAAGACCGAACTTGTCGATCACGAGTGCCAAATATGTGGCAGACACTTCCTGGGAATCAATCCCTTCAAAAAACATCTCCAGTCCCACAGCACCGAACGACCACACAAATGCGATATTTGCGGACGGGCCTTCAAACGATTGCACGAAATGAAAAAACACCGCGACATTCATGGCGAAAGCGTTTACAATTGCGACACTTGCGACTTCTCCAGCAATTACTGGCTCGTCCTGAGGTCCCACCTGCGATCGGAACATCGAGCCGGTCGCTCCGACAAAACCGATGGAACCGAAGAAACTTGA
Protein Sequence: METGDRPRSCNVCMKSFLPSNALVVHKLTRIGVRPRVCDLCDKSFTERNTTMAHKRKHPGSRPPPAPGSLSKYDNALDSNSFISPDPLGPDYLTVKIMDDIYRIPKSKCYMVLNHPASGNKAILDSTPFMELENLSNVGINLDKEVATGSRSSVSMNKIPMVKIGCPFEMETAPKPVKKRGKRGRKPAAAAAPARESKKTRAKEQEEGGRETAGKSAFECTWVKSEPEEVKEKEYLCTTCPKKFRSNRELKSHEKTHLEPRFYCNECDYDTSALSTLSIHMTRNHPDEADAPFQCTQCQKRFRKAIDLQEHYNIHLGEKPFACQRCGSAFHLRRQLSAHCRKVHPRKKVRVTSTACNICGRVLSSRRSLSRHKQTHNPTKLYLCDLCGKNLSNAEHLKKHRRIHTGEKPYVCDTCGKGFTDSENLRLHQRVHTGEKPYQCDQCPKAFSQRSTLTIHQRGHTGERPYITPDPLGPDYLTVKIMDDFYRIPKSKCYMMLTRPKVGDKSSSTLDKSLTKDAEPLESSVEASIDGEKVSLVRLKSREPRASKLECCSDLEAAPEPRRKRTKRKISEKRDRGKKKLRAIEKARKEDETECEKSSERLDSEDLDNVPLDDREIREKPKENIENEETEGNDVLESLSMDSSRELEDSNEETKQMPKKSACMPYQCQTCGYKFSRKWKYERHMNSHARKKVESPNFECVPCGKNFTRPSAYKQHMLKHSNEKPHKCDVCDKAFKRPYELKMHREIHSGSMHTCDICSFSTAYKVSLMVHKKRVHQKIYRHKCEQCEKAFMSKHELEDHRTCHLGEKSFICEICGNGFLQRSYLVHHKRVVHGVHNRAPMELKCEMCDKTFATKYCLQNHVGIHSQKFLCSQCGKEFATNYSLRMHNRMHTGERPHKCNMCSKSFARSNALAVHKLTHTGQRPYVCDICDKTFTQRTTMMAHRRKHPGSHPPPPRTSLVELANVGDSNSSAVPDPLESEFLIVKILEEFYRVPRSQCTKLLTLTSAVTSAKPDGASGRKRRKKFAKKKKEKIAEEEEGTSAQALEFVAVKTEFPSDSEAPKAEEAEKEPESSSMSMDHEIKSESDAAPTIKHESIDLDEMPLHERELLVQVEKRREDLLRGQEESDGFSIVGFRKSADFKRSKSDAIFVCKPCGYLFKHKSKYERHMYMHNGQRPRQKSYKCEPCGFKFSSKPKYDRHMNIHNREDDGTVNYECRPCGFQTAYKSKYDRHMKIHSKNKSEESPYHCCPCGYDFPCQSEFDRHMSLHVGKHSESMNYDCEICDEKFDIKWRYDRHVKTHTRVKTELVDHECQICGRHFLGINPFKKHLQSHSTERPHKCDICGRAFKRLHEMKKHRDIHGESVYNCDTCDFSSNYWLVLRSHLRSEHRAGRSDKTDGTEET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00829698;
90% Identity: iTF_00829698;
80% Identity: -