Basic Information

Insect: Hyposoter didymator
Gene Symbol: -
Assembly: None
Location: scaffold25:2488413-2494468[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 5.7e-06 0.00049 20.3 2.7 1 23 124 146 124 146 0.98

2 27 0.21 18 5.9 0.0 2 23 151 172 151 172 0.97

3 27 0.00024 0.021 15.2 1.4 3 23 180 200 178 200 0.96

4 27 5.8e-06 0.00049 20.3 0.2 3 23 208 228 206 228 0.97

5 27 1.2 1e+02 3.5 4.0 1 23 237 259 237 259 0.96

6 27 5.5 4.7e+02 1.5 0.9 3 23 267 286 266 286 0.79

7 27 0.00015 0.013 15.8 1.7 3 23 294 314 293 314 0.98

8 27 0.001 0.087 13.2 0.7 1 23 416 438 416 438 0.96

9 27 1.4e-05 0.0012 19.1 0.4 2 23 445 467 445 467 0.96

10 27 0.00017 0.015 15.6 1.5 1 23 473 495 473 495 0.95

11 27 0.073 6.3 7.4 0.4 1 23 499 521 499 521 0.97

12 27 7.6e-05 0.0065 16.7 1.5 2 23 528 549 527 549 0.96

13 27 0.00037 0.032 14.6 0.4 1 23 555 577 555 577 0.98

14 27 0.27 23 5.6 1.8 1 23 583 605 583 605 0.96

15 27 2e-06 0.00017 21.7 0.1 2 23 612 633 611 633 0.97

16 27 4.8e-07 4.1e-05 23.7 0.6 1 23 639 661 639 661 0.98

17 27 2.4e-06 0.00021 21.4 0.6 1 21 667 687 667 688 0.95

18 27 0.00011 0.0094 16.2 0.2 1 23 763 785 763 785 0.93

19 27 1.7e-05 0.0014 18.8 4.0 1 23 791 813 791 813 0.98

20 27 1.6e-07 1.4e-05 25.2 0.1 1 23 819 841 819 841 0.98

21 27 0.023 2 8.9 3.3 2 23 848 870 845 870 0.91

22 27 3.1e-05 0.0026 18.0 4.9 1 23 875 897 875 897 0.97

23 27 2e-06 0.00017 21.7 0.6 1 23 906 928 906 928 0.98

24 27 5.2e-05 0.0044 17.3 0.1 1 23 934 956 934 956 0.97

25 27 5.9e-05 0.005 17.1 1.3 2 23 963 984 962 984 0.97

26 27 6.2e-06 0.00053 20.2 3.3 1 23 990 1012 990 1012 0.98

27 27 4.8e-06 0.00041 20.5 0.6 1 23 1018 1040 1018 1040 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	5.7e-06	0.00049	20.3	2.7	1	23	124	146	124	146	0.98
2	27	0.21	18	5.9	0.0	2	23	151	172	151	172	0.97
3	27	0.00024	0.021	15.2	1.4	3	23	180	200	178	200	0.96
4	27	5.8e-06	0.00049	20.3	0.2	3	23	208	228	206	228	0.97
5	27	1.2	1e+02	3.5	4.0	1	23	237	259	237	259	0.96
6	27	5.5	4.7e+02	1.5	0.9	3	23	267	286	266	286	0.79
7	27	0.00015	0.013	15.8	1.7	3	23	294	314	293	314	0.98
8	27	0.001	0.087	13.2	0.7	1	23	416	438	416	438	0.96
9	27	1.4e-05	0.0012	19.1	0.4	2	23	445	467	445	467	0.96
10	27	0.00017	0.015	15.6	1.5	1	23	473	495	473	495	0.95
11	27	0.073	6.3	7.4	0.4	1	23	499	521	499	521	0.97
12	27	7.6e-05	0.0065	16.7	1.5	2	23	528	549	527	549	0.96
13	27	0.00037	0.032	14.6	0.4	1	23	555	577	555	577	0.98
14	27	0.27	23	5.6	1.8	1	23	583	605	583	605	0.96
15	27	2e-06	0.00017	21.7	0.1	2	23	612	633	611	633	0.97
16	27	4.8e-07	4.1e-05	23.7	0.6	1	23	639	661	639	661	0.98
17	27	2.4e-06	0.00021	21.4	0.6	1	21	667	687	667	688	0.95
18	27	0.00011	0.0094	16.2	0.2	1	23	763	785	763	785	0.93
19	27	1.7e-05	0.0014	18.8	4.0	1	23	791	813	791	813	0.98
20	27	1.6e-07	1.4e-05	25.2	0.1	1	23	819	841	819	841	0.98
21	27	0.023	2	8.9	3.3	2	23	848	870	845	870	0.91
22	27	3.1e-05	0.0026	18.0	4.9	1	23	875	897	875	897	0.97
23	27	2e-06	0.00017	21.7	0.6	1	23	906	928	906	928	0.98
24	27	5.2e-05	0.0044	17.3	0.1	1	23	934	956	934	956	0.97
25	27	5.9e-05	0.005	17.1	1.3	2	23	963	984	962	984	0.97
26	27	6.2e-06	0.00053	20.2	3.3	1	23	990	1012	990	1012	0.98
27	27	4.8e-06	0.00041	20.5	0.6	1	23	1018	1040	1018	1040	0.98

Sequence Information

Coding Sequence: ATGGAAACGCACACAGCAAAGCCAGAGTCGCCTGTGAATCACCCGGCAGTGAGTACGGGAAAGCTTCGGAAAGCTAGGAAATGGGATGGAGAGAATTTGTCGAAAACGTCGAGCAGGAAGGTTCGCGTTGAGCGAAGCGAATTCCGAGTAGTTGACAGAATTTTAGAGCCGGAGAAAAAGAGGCTGAGACTTGTGGATGGTGGGAAAAAAGTTGAGCACGTTCGTGAACCTCGTATCGAGAGCAACGACCGCCATTTTCCGATAAATCGATTTTCTCAAAGCAAAAAAGCGAAAAGTACGATTTTCAAGGTGACGGGATCGAAAAAATCGATCGAAAGTGTCGAGAAAGATGAAAAGATTTTTGCCTCGTTCGAGTGCGACGTCTGCCACAAAATTTTCAAGAAAAAACGTTACCTCCGGGTACATATTCGTGCTCACAGTTGTCCTCGCGTCTGTGAGATCTGCGGCGCCCTGTTAGCCTCGGAATTTAGTCTCGACCTCCACTTGAGACGTCACACTGGCGATTACTCGATATTTTGTGAAATTTGCAAAAAAGGCTTTTATCACGAAGCAACGTTGAAGCTCCACATGACTTCTCACACGAAAGAGAAGAAAATAGCGTGTGGAGTTTGCCAAAAAGCCTTCGCGAATCGCGTCTATCTCAGGAGCCACATGAAAACTCACGTCGACTCGAAAAAGCGTAAAAAATACGCGTGCAACTTGTGCCAATTTGAAACTTTTTACAGCTCGTGTTACAAAGAACATCGCGAGACTCACACCGGCGAAGGCAAAGTCTCTTGCGATCTTTGCGCCAAATTAATTCGCCGGCAATACATGAAAACTCACATGAAAATCCATCGAGGCGACAAAAACGAAATTTGCGAGTTTTGCGGCAAAGCTTTCCTCTCTAGAAAATATTTGACCAAACACCGTCGCACTCATACCGGCGAAAAACCTTACATTTGCTTCGTTTGCGATTGCCATTTTACTCAACGGTGCGAGGCGGAGGAGGACGTTGAGGGGAGAAAATTGGAGGCGTCTGGGCTGGTTGACGACGAGTTCATAAGTCCGATGGGAGAGGCGGAGTTTGTGGAGGAATTTGAGACTCTGGAGGATCACGAGATAGTGCTGGAGACGTTGGAGTACGAGGAGGTCGAGGTGAGGAATACAGAGGCTGGCCTGGAGCTGGGCCTGGAAGATTTGAAGGTCCAGCCGGCGGAGAAATGGATAAAAAAGGGAAAAAGCTACGAGTGCGAAATTTGCGGAAAGAGGATGAAAAAAAAAGTGCAATTTCTTCGTCATCGTGGGATTCACGAAAGGGCAAGGATCGGGAGTTGCGAGGAGTGCGATCGCGTCTTTTACGACGAGGAGAAGCTGCGGAAACACATGATAAAAATGCACCAAGATGACAAGCCCTTCGCCTGCCTTTTGTGCGGAAAATCCTTCAAGACTGAGGAATTCCTCAAGACACATTCGAAGCAACACAACAAAAAATTCACCTGTGACATTTGCGGAGTCTCCAAAGTTTCCGGCTACGATTTACGTCTCCACAAGAAAAAACACAATCAGGAGTACGTTATTCATTGCAACGTGTGCAACAAAGGATTCTACACGAATCAGACGCTCGAGAGACACGCCCTGACCCACACGGGAGAGAAACCTTTCGTCTGTAAAATCTGCAAAAGCCCATACGCGAGTTCGGCTTATTTGAGCATGCACATGAAATCCCATGGCGAACGAGAAAAGCACAAATGCAATATTTGCGACTTCGAGAGCCACTGGAAAGCCGCCCTGAAGGTTCATCTCAAGATCCACACCGGGGAGAACCAAATCAGTTGCGAAATCTGTGGAAAATCAGTATCGAGCAAAACTTATCTCGCTATTCACATGAGAATCCATTCCGGCGAGAAACCCCACGTCTGCGAGATCTGCGGCAAAGCCTTCAGTGTCCGGAAATACTTGATCGTCCATCTGAGGACTCACACCGGCGAGAAACCTTACGAGTGCAAAATCTGCCAGAAAAGATTCACTCAACAAGGCTCCTTGAACGCTCACACTAAGTCGCCAAGCGAGATCGACGAGAGGCCAAGATCGACGTATTTCCAAGTGGGAAAATCAGTGGAAAACCTGGAAAGGAGAAAAGTCGCAGAAAGGCAGGAAAATTGTTGGTTGAAAAAAGAAAATTGTCTCGAGGAGGAAGAACGAGGAAAACCGGAAGAAGAGACTGAAGAGCTGAGGACCGAGGGCGAAACGAACGAGGCGTGGGAAGCGAGGACGAAGGATTTTTACAAATGTGACGTTTGCCCGAAGGTTTTCAGGTCGAAAAACTTGTACGAAGGTCATTTGGTCGCGCACAGTGACGCGCGACCTCACGAATGTGACATTTGTCACAAATCATTCAAACGAACAAACACCCTCGCGGTCCATCGTCGGATTCATACGCACGAAAGAAATTTCGTGTGCGACGTTTGCGGGCGAGCTTTCGTGCAGGCGTCTCAATTGGCCACGCACCAGCGACGACATTTCGAGAAATACACGTGTTTCTGCGACGTGTGTGGAAAAGGTTTCTTCACGAATGCCGAACGCCATGGCCACATGAACATGAAACACGCAGCCAACGAGCACGTTTGTCATTCGTGTGGAAAGACTTTTCCCAACAATCACACACTCGCGAGACACGCCAAGATGCACGAGCCCAATTTCCGGCCGGTTAAGCATCAGTGCGAAATCTGCGGCAAAGTTTTCGCCTATAAAAACTCCCTCGTTGTCCACGTCAAGTCGCACACCGGGGAGAACAAATTCGCGTGCGATTTGTGCGACAAAATCGTCTCGTCGAAAGGCTCCCTCCAGGATCATCTTCGCCTTCACGGCGGCGAGAAATCTCTCGTTTGCGACGTTTGCGGCAAAGCTTTCCATAAGCGCACCACCCTCGTCGTTCACAAAAGAACTCATACCGGCGAAAAACCATACAATTGTGACACCTGCGGAAAATCCTTCACCCAACATTCGACTCTCGTTATTCACAAACGTTACCACACCGGACAAAGACCCTACGAGTGCACCTACTGCACCAAATCTTTCGTGTCGAGAGCCCTGCTCAACGCTCACAGTAAAATCCACGTCGTTAGTGTCGTTTTCGTCGAGAGTCCGAAAAACGACGACTGA
Protein Sequence: METHTAKPESPVNHPAVSTGKLRKARKWDGENLSKTSSRKVRVERSEFRVVDRILEPEKKRLRLVDGGKKVEHVREPRIESNDRHFPINRFSQSKKAKSTIFKVTGSKKSIESVEKDEKIFASFECDVCHKIFKKKRYLRVHIRAHSCPRVCEICGALLASEFSLDLHLRRHTGDYSIFCEICKKGFYHEATLKLHMTSHTKEKKIACGVCQKAFANRVYLRSHMKTHVDSKKRKKYACNLCQFETFYSSCYKEHRETHTGEGKVSCDLCAKLIRRQYMKTHMKIHRGDKNEICEFCGKAFLSRKYLTKHRRTHTGEKPYICFVCDCHFTQRCEAEEDVEGRKLEASGLVDDEFISPMGEAEFVEEFETLEDHEIVLETLEYEEVEVRNTEAGLELGLEDLKVQPAEKWIKKGKSYECEICGKRMKKKVQFLRHRGIHERARIGSCEECDRVFYDEEKLRKHMIKMHQDDKPFACLLCGKSFKTEEFLKTHSKQHNKKFTCDICGVSKVSGYDLRLHKKKHNQEYVIHCNVCNKGFYTNQTLERHALTHTGEKPFVCKICKSPYASSAYLSMHMKSHGEREKHKCNICDFESHWKAALKVHLKIHTGENQISCEICGKSVSSKTYLAIHMRIHSGEKPHVCEICGKAFSVRKYLIVHLRTHTGEKPYECKICQKRFTQQGSLNAHTKSPSEIDERPRSTYFQVGKSVENLERRKVAERQENCWLKKENCLEEEERGKPEEETEELRTEGETNEAWEARTKDFYKCDVCPKVFRSKNLYEGHLVAHSDARPHECDICHKSFKRTNTLAVHRRIHTHERNFVCDVCGRAFVQASQLATHQRRHFEKYTCFCDVCGKGFFTNAERHGHMNMKHAANEHVCHSCGKTFPNNHTLARHAKMHEPNFRPVKHQCEICGKVFAYKNSLVVHVKSHTGENKFACDLCDKIVSSKGSLQDHLRLHGGEKSLVCDVCGKAFHKRTTLVVHKRTHTGEKPYNCDTCGKSFTQHSTLVIHKRYHTGQRPYECTYCTKSFVSRALLNAHSKIHVVSVVFVESPKNDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -