Hdid000313.1
Basic Information
- Insect
- Hyposoter didymator
- Gene Symbol
- lola
- Assembly
- None
- Location
- scaffold128243:3839315-3841398[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-10 9.8e-07 28.3 0.0 8 45 379 416 372 416 0.91
Sequence Information
- Coding Sequence
- ATGGTAATAAGGGCTCCGATGGATGAACCGAAAGCGTATTGTTTGCGATGGAGCAACCACCAGGCGAACCTCGTCTCGGTGATGGACGATCTTCTGGTGCATAAGAAACTGACCGACGTGGCACTAGGAACTGACGACGGTCCGTTGATCTGGTGCCACAAAGTCATTTTGGCGACATGTTCGCCATATTTTCGAAAACTTTTCATAGACGCAACGTCTCATAATCCAATAGTCTTGCTAAAGGATACGAGCTATCCGGTGGTGAAGATTCTGCTGGAGTACATGTACAGGGGAGAGGTGAACGTTTCCCAGGATAATGTGGCTGCTCTTTTGGATCTGGCTGCGTTGCTGCAGGTCAAGGGTTTGGCGATACGAGAGGAGTTGAATTTTGGAGTTCCGCTAGCAGCGCCACCATCGCCGGTGGTTGGCAGTACAAGCAGCAATGGTTACGAGGAAGCTCATCCTCGAGAAGCTTCTGAGCGAAGCTTGGGAGCGAATTCTAGTGAACGCGAGAGCGAGCGAAATAACGCTAACGCGAGCAGGTTGAACGAAGCGGTCGAGGAGCCGGCTGTACGACAAGAAATCCACCGGAACCCGCTGCCACCTCTGATACAACGATGGCCGATGGCACCGATGGTTTTGACCGAAGAACAACAATCTGCCGTGGCTGCCTTCGCCAATTTACATCCTTTTCCCGCGACCTCTTATTCGCTTTCCCAATTTTATCAAAACAGCACCGAGTCTTCGTGCTCACGAAATCCGCATTACCAGACGTCTCAGAACCCACCGATCCCTAATATCCAAGACACTTCGATCCTCAGGTCGGTCCTCAATCCCGAACAAGTCGATCCAACTTTGAGATTACCTCCAAACCGTCAAGAACCCCGCAATCGACGTCATCGCAATCGTAAGAATCGACCTCCGCAACACCTTCAACGACGAAGCAGTTCCGATCTCCAGCAAATGCCTTCAACCTCCCAGGAAAGCGATCCAACTCCTGTCGTCGAATCCGAACAAAACAGAACGACTCCTCAACCTTCAGCTGAACCCGTGCCATCCGTATCTGGTTACGGAGGGTCTCAGAGGCAAGAAAACAAGCGTTATAAAAAATATGACCCACGAGACATATGGATGGCGATCGCCGAAGTCCAAAGAGGCTTGAGCGCCAACAAAGCAGCAGAAAAGTTCAAAGTGCCTTCAAGAACTCTGTACGACAAGATAAAAAAGATGAAAACCTCGGAATCGCGAGACAAGCAGCGATTGAGACCATGCGAGATGGTGAGCAACGTTCCGAATGTGCAAAACGAAGTTCAAGGCAACGCGAGCACCGTCGCATTGGAAAACCCAGCCACCAGTCCGAACGAAGAAACAATGAGCGATCCGATCGACAACCCAATCGCCATGGTCGAGACTTCGTTCGGTGAAGATCGAGAACGATCAAACGTTCCCGAAAGATCGTTCGACTCTGATCACGAAAGTCCAATGCCACGTGATAGCAGCAACGCCAATTCGCAGCCCGCGTCACCCGGTGAATTACAAATCGATCACAACGAAGAGGAAGCCGAAGATCTCACGGTAAGCCGTAGACCACCCAATGTCCACGACGGAGTTTCTCCGAATAGCGATAACGACGAAACCCTTGAGTAA
- Protein Sequence
- MVIRAPMDEPKAYCLRWSNHQANLVSVMDDLLVHKKLTDVALGTDDGPLIWCHKVILATCSPYFRKLFIDATSHNPIVLLKDTSYPVVKILLEYMYRGEVNVSQDNVAALLDLAALLQVKGLAIREELNFGVPLAAPPSPVVGSTSSNGYEEAHPREASERSLGANSSERESERNNANASRLNEAVEEPAVRQEIHRNPLPPLIQRWPMAPMVLTEEQQSAVAAFANLHPFPATSYSLSQFYQNSTESSCSRNPHYQTSQNPPIPNIQDTSILRSVLNPEQVDPTLRLPPNRQEPRNRRHRNRKNRPPQHLQRRSSSDLQQMPSTSQESDPTPVVESEQNRTTPQPSAEPVPSVSGYGGSQRQENKRYKKYDPRDIWMAIAEVQRGLSANKAAEKFKVPSRTLYDKIKKMKTSESRDKQRLRPCEMVSNVPNVQNEVQGNASTVALENPATSPNEETMSDPIDNPIAMVETSFGEDRERSNVPERSFDSDHESPMPRDSSNANSQPASPGELQIDHNEEEAEDLTVSRRPPNVHDGVSPNSDNDETLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00439629;
- 90% Identity
- iTF_00829649;
- 80% Identity
- iTF_00828912;